BLASTX 7.6.2
Query= UN21452 /QuerySize=1535
(1534 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 174 1e-042
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 142 1e-032
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 138 1e-031
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 105 1e-021
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 104 3e-021
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 72 1e-011
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 70 3e-011
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 70 3e-011
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 70 3e-011
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 70 3e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 70 3e-011
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 70 3e-011
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 70 3e-011
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 70 4e-011
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 70 4e-011
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 69 6e-011
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 69 6e-011
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus muscu... 69 8e-011
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 69 8e-011
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 69 8e-011
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 174 bits (441), Expect = 1e-042
Identities = 81/167 (48%), Positives = 120/167 (71%), Gaps = 3/167 (1%)
Frame = +1
Query: 304 RSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS--YGFVHYFDRRSAGLAIMSL 477
R++Y GN+ VTEVL+ ++F+ GP +SCK+I + S+ Y FV +++ R A A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 478 NGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARV 654
NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSP++T + +F+ F SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 655 MWDQKTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATK 795
+ D TG+S+G+GFVSF N+ DA+NAI M G+WL RQIR NWAT+
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 142 bits (356), Expect = 1e-032
Identities = 64/126 (50%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +1
Query: 421 YGFVHYFDRRSAGLAIMSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPDVT 597
Y FV +++ R A A+ ++NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSP++T
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 126
Query: 598 DAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIR 777
+ +F+ F SDARV+ D TG+S+G+GFVSF N+ DA+NAI M G+WL RQIR
Sbjct: 127 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 186
Query: 778 CNWATK 795
NWAT+
Sbjct: 187 TNWATR 192
>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein
PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3
Length = 453
Score = 138 bits (347), Expect = 1e-031
Identities = 70/178 (39%), Positives = 109/178 (61%), Gaps = 4/178 (2%)
Frame = +1
Query: 271 NLPPGFDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLI--RKDKS-SYGFVHYF 441
N G T+ R +Y GN+ +TE +L++ F GP+ + K++ + +K+ +Y FV Y
Sbjct: 64 NAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYH 123
Query: 442 DRRSAGLAIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESF 621
A +A+ +LNG+ + +K+NWA+ + Q+ + FN+FVGDL+ +V D L +F
Sbjct: 124 QSHDANIALQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAF 182
Query: 622 SAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATK 795
F + VMWD +TG SRG+GFVSF +Q DAQNA++ M G+ L+ R +R NWA K
Sbjct: 183 KDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 105 bits (261), Expect = 1e-021
Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +1
Query: 547 TSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 726
+ HF++FVGDLSP++T + +F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
Query: 727 NAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGK--SVVELTNGSS 867
NAI +M G+WL RQIR NWAT+ + + S+ K S E+ N SS
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 210
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 104 bits (257), Expect = 3e-021
Identities = 47/99 (47%), Positives = 68/99 (68%)
Frame = +1
Query: 547 TSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 726
+ HF++FVGDLSP++T + +F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
Query: 727 NAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSV 843
NAI +M G+WL RQIR NWAT+ + + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 72 bits (174), Expect = 1e-011
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 745 NGKWLSSRQIRCN 783
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 70 bits (171), Expect = 3e-011
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1
Query: 550 SSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQN 729
S +FVG LS D + AL + FS + S+ V+ D++T RSRGFGFV+F N DA++
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 730 AINEMNGKWLSSRQIRCNWATKGA 801
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
GN=Cirbp PE=1 SV=1
Length = 172
Score = 70 bits (171), Expect = 3e-011
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1
Query: 550 SSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQN 729
S +FVG LS D + AL + FS + S+ V+ D++T RSRGFGFV+F N DA++
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 730 AINEMNGKWLSSRQIRCNWATKGA 801
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 70 bits (171), Expect = 3e-011
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1
Query: 550 SSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQN 729
S +FVG LS D + AL + FS + S+ V+ D++T RSRGFGFV+F N DA++
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 730 AINEMNGKWLSSRQIRCNWATKGA 801
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 70 bits (171), Expect = 3e-011
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +1
Query: 559 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAIN 738
F IF GDL +V D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 349 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 408
Query: 739 EMNGKWLSSRQIR 777
EMNGK++ SR I+
Sbjct: 409 EMNGKYVGSRPIK 421
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 70 bits (171), Expect = 3e-011
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +1
Query: 559 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAIN 738
F IF GDL +V D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 381 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 440
Query: 739 EMNGKWLSSRQIR 777
EMNGK++ SR I+
Sbjct: 441 EMNGKYVGSRPIK 453
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 70 bits (171), Expect = 3e-011
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +1
Query: 559 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAIN 738
F IF GDL +V D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 739 EMNGKWLSSRQIR 777
EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 70 bits (171), Expect = 3e-011
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +1
Query: 559 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAIN 738
F IF GDL +V D L +FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 739 EMNGKWLSSRQIR 777
EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 70 bits (170), Expect = 4e-011
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +1
Query: 559 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAIN 738
+ FVG L+ DA L +FS F D++++ D++TGRSRGFGFV+F++++ ++AI+
Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65
Query: 739 EMNGKWLSSRQIRCNWA 789
EMNGK L R I N A
Sbjct: 66 EMNGKELDGRTITVNEA 82
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 70 bits (170), Expect = 4e-011
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +1
Query: 550 SSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQN 729
S F IF GDL +V D L +FS + + A+V+ D++TG+++G+GFVSF++ D
Sbjct: 290 SDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVR 349
Query: 730 AINEMNGKWLSSRQIR 777
A+ EMNGK++ SR I+
Sbjct: 350 AMREMNGKYVGSRPIK 365
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens
GN=CIRBP PE=1 SV=1
Length = 172
Score = 69 bits (168), Expect = 6e-011
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +1
Query: 550 SSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQN 729
S +FVG LS D + +L + FS + S+ V+ D++T RSRGFGFV+F N DA++
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 730 AINEMNGKWLSSRQIRCNWATKGA 801
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii
GN=CIRBP PE=2 SV=1
Length = 172
Score = 69 bits (168), Expect = 6e-011
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +1
Query: 550 SSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQN 729
S +FVG LS D + +L + FS + S+ V+ D++T RSRGFGFV+F N DA++
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 730 AINEMNGKWLSSRQIRCNWATKGA 801
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3
PE=1 SV=1
Length = 153
Score = 69 bits (167), Expect = 8e-011
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +1
Query: 547 TSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 726
+S +FVG L+ + + AL + FS+F S+ V+ D++T RSRGFGF++F N + A
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 727 NAINEMNGKWLSSRQIRCNWATKGA 801
+A+ MNG+ L RQIR + A K A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSA 86
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 69 bits (167), Expect = 8e-011
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 511 VNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGF 690
V+W T E + F IF GDL +V D L +FS + + A+V+ D++TG+++G+
Sbjct: 288 VSWE-DTSLLEWETDDFRIFCGDLGNEVNDDILARAFSRYPSFLKAKVVRDKRTGKTKGY 346
Query: 691 GFVSFRNQQDAQNAINEMNGKWLSSRQIR 777
GFVSF++ D A+ EMNG+++ SR I+
Sbjct: 347 GFVSFKDPNDYVRAMREMNGRYVGSRPIK 375
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 69 bits (167), Expect = 8e-011
Identities = 37/99 (37%), Positives = 58/99 (58%)
Frame = +1
Query: 493 FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKT 672
+G + ++ +G + S ++VG+LS V D AL F+ +ARV++D+ +
Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294
Query: 673 GRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWA 789
GRS+GFGFV+ + Q+ Q AIN +NG L RQIR + A
Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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