BLASTX 7.6.2
Query= UN21452 /QuerySize=1535
(1534 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 747 5e-216
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 745 3e-215
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 693 1e-199
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 641 4e-184
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 634 6e-182
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 79 5e-015
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 79 5e-015
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 72 1e-012
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 72 1e-012
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 72 1e-012
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 72 1e-012
TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-bindin... 70 3e-012
TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (... 69 6e-012
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 69 7e-012
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 69 7e-012
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 69 9e-012
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 68 1e-011
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 68 2e-011
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 747 bits (1928), Expect = 5e-216
Identities = 376/442 (85%), Positives = 401/442 (90%), Gaps = 25/442 (5%)
Frame = +1
Query: 118 MQNPRL-----KQQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPP 282
MQN RL +QQQQQ QQAM+QQA+MQQH SLYHP +MA PPQMEPLPSGNLPP
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMA-----PPQMEPLPSGNLPP 55
Query: 283 GFDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGL 462
GFDPTTCRSVYAGNIHTQVTE+LLQEIFASTGP+ESCKLIRKDKSSYGFVHYFDRR A +
Sbjct: 56 GFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASM 115
Query: 463 AIMSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCS 642
AIM+LNGRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSP+VTDAALF+SFSAFN+CS
Sbjct: 116 AIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCS 175
Query: 643 ----DARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATKGATFG 810
DARVMWDQKTGRSRGFGFVSFRNQQDAQ AINEMNGKW+SSRQIRCNWATKGATFG
Sbjct: 176 SYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFG 235
Query: 811 EDKHSSDGKSVVELTNGSSEDGREISISNEEAPENNPQYTTVYVGNLAPEFLQVTQLDLH 990
EDKHSSDGKSVVELTNGSSEDGRE +SNE+APENNPQ+TTVYVGNL+PE VTQLDLH
Sbjct: 236 EDKHSSDGKSVVELTNGSSEDGRE--LSNEDAPENNPQFTTVYVGNLSPE---VTQLDLH 290
Query: 991 RLFHTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPT 1170
RLF+TLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGN+QPFLF+RQI+CSWGNKPT
Sbjct: 291 RLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPT 350
Query: 1171 PIGTASNPL-PPVPVAVPGLSPMDLLAYERQLALAKMHPQAQHSLRH----VNAAGASAA 1335
P GTASNPL PP P +VP LS MDLLAYERQLALAKMHPQAQHSLR VN AG + A
Sbjct: 351 PSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAKMHPQAQHSLRQAGLGVNVAGGT-A 409
Query: 1336 AMYDGGFQNVAAAHQQLMYYQ* 1401
AMYDGG+QNVAAAHQQLMYYQ*
Sbjct: 410 AMYDGGYQNVAAAHQQLMYYQ* 431
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 745 bits (1921), Expect = 3e-215
Identities = 370/433 (85%), Positives = 394/433 (90%), Gaps = 11/433 (2%)
Frame = +1
Query: 118 MQNPRLKQQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDPT 297
MQN RL +QQQQQQQ QQA++QQ HPSL P PPQMEPLPSGNLPPGFDPT
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPT 60
Query: 298 TCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSL 477
TCRSVYAGNIHTQVTE+LLQEIFASTGP+ESCKLIRKDKSSYGFVHYFDRR A +AIM+L
Sbjct: 61 TCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTL 120
Query: 478 NGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVM 657
NGRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSP+VTDAALF+SFSAFN+CSDARVM
Sbjct: 121 NGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVM 180
Query: 658 WDQKTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGK 837
WDQKTGRSRGFGFVSFRNQQDAQ AINEMNGKW+SSRQIRCNWATKGATFGEDKHSSDGK
Sbjct: 181 WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGK 240
Query: 838 SVVELTNGSSEDGREISISNEEAPENNPQYTTVYVGNLAPEFLQVTQLDLHRLFHTLGAG 1017
SVVELTNGSSEDGRE +SNE+APENNPQ+TTVYVGNL+PE VTQLDLHRLF+TLGAG
Sbjct: 241 SVVELTNGSSEDGRE--LSNEDAPENNPQFTTVYVGNLSPE---VTQLDLHRLFYTLGAG 295
Query: 1018 VIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPL 1197
VIEEVRVQRDKGFGFVRYNTHDEAALAIQMGN+QPFLF+RQI+CSWGNKPTP GTASNPL
Sbjct: 296 VIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPL 355
Query: 1198 -PPVPVAVPGLSPMDLLAYERQLALAKMHPQAQHSLRH----VNAAGASAAAMYDGGFQN 1362
PP P +VP LS MDLLAYERQLALAKMHPQAQHSLR VN AG + AAMYDGG+QN
Sbjct: 356 PPPAPASVPSLSAMDLLAYERQLALAKMHPQAQHSLRQAGLGVNVAGGT-AAMYDGGYQN 414
Query: 1363 VAAAHQQLMYYQ* 1401
VAAAHQQLMYYQ*
Sbjct: 415 VAAAHQQLMYYQ* 427
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 693 bits (1787), Expect = 1e-199
Identities = 357/436 (81%), Positives = 377/436 (86%), Gaps = 24/436 (5%)
Frame = +1
Query: 130 RLKQ-QQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDPTTCR 306
RLKQ QQQQQQQAMMQQ + Q HSLYHP ++A PPQ+EP+PSGNLPPGFDP+TCR
Sbjct: 5 RLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLA-----PPQLEPVPSGNLPPGFDPSTCR 59
Query: 307 SVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGR 486
SVY GNIHTQVTE LLQEIF STGPVES KLIRKDKSSYGFVHYFDRRSA LAI+SLNGR
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGR 119
Query: 487 HLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQ 666
HLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSP+VTDA L++SFS F++CSDARVMWDQ
Sbjct: 120 HLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQ 179
Query: 667 KTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVV 846
KTGRSRGFGFVSFRNQQDAQ AINEMNGKWLSSRQIRCNWATKGAT G+DK SSDGKSVV
Sbjct: 180 KTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVV 239
Query: 847 ELTNGSSEDGREISISNEEAPENNPQYTTVYVGNLAPEFLQVTQLDLHRLFHTLGAGVIE 1026
ELT GSSEDG+E NEE PENN Q+TTVYVGNLAPE VTQLDLHR FH LGAGVIE
Sbjct: 240 ELTTGSSEDGKE--TLNEETPENNSQFTTVYVGNLAPE---VTQLDLHRYFHALGAGVIE 294
Query: 1027 EVRVQRDKGFGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPL-PP 1203
EVRVQRDKGFGFVRYNTH EAALAIQMGN+QP+LFNRQIKCSWGNKPTP GTASNPL PP
Sbjct: 295 EVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPP 354
Query: 1204 VPVAVPGLSPMDLLAYERQLALAK-------MHPQAQHSLRH---VNAAGASAAAMYDGG 1353
P VPGLS DLL YERQLAL+K MH Q QH LR +NAAGA+ AAMYDGG
Sbjct: 355 APAPVPGLSAADLLNYERQLALSKMASVNALMHQQGQHPLRQAHGINAAGAT-AAMYDGG 413
Query: 1354 FQNVAAAHQQLMYYQ* 1401
FQNVAAA QQLMYYQ*
Sbjct: 414 FQNVAAA-QQLMYYQ* 428
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 641 bits (1653), Expect = 4e-184
Identities = 327/430 (76%), Positives = 360/430 (83%), Gaps = 27/430 (6%)
Frame = +1
Query: 145 QQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDPTTCRSVYAGN 324
QQQQQQ MMQQALMQQ SLYHP L+A PPQ+EP+PSGNLPPGFDP+TCRSVY GN
Sbjct: 7 QQQQQQVMMQQALMQQ-QSLYHPGLLA-----PPQIEPIPSGNLPPGFDPSTCRSVYVGN 60
Query: 325 IHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGRHLFGQP 504
IH QVTE LLQE+FA TGPVESCKLIRK+KSSYGFVHYFDRRSAGLAI+SLNGRHLFGQP
Sbjct: 61 IHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQP 120
Query: 505 IKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSR 684
IKVNWAYA+GQREDTSSHFNIFVGDLSP+VTDA LF FS + TCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSR 180
Query: 685 GFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGS 864
GFGFVSFRNQQDAQ AI+E+ GKWL SRQIRCNWATKGAT GEDK SSD KSVVELT+G
Sbjct: 181 GFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGV 240
Query: 865 SEDGREISISNEEAPENNPQYTTVYVGNLAPEFLQVTQLDLHRLFHTLGAGVIEEVRVQR 1044
SEDG++ +N EAPENN QYTTVYVGNLAPE V+Q+DLHR FH+LGAGVIEEVRVQR
Sbjct: 241 SEDGKD--TTNGEAPENNAQYTTVYVGNLAPE---VSQVDLHRHFHSLGAGVIEEVRVQR 295
Query: 1045 DKGFGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPL-PPVPVAVP 1221
DKGFGFVRY+TH EAALAIQMGN+ +L RQ+KCSWG+KPTP GTASNPL PP P +P
Sbjct: 296 DKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIP 355
Query: 1222 GLSPMDLLAYERQLALAKM--------HPQAQHSLRHVNAAGASAA--AMYDGGFQNVAA 1371
G S DLLAYERQLA++KM HPQ QH+ + A GA+ + A+YDGG+QN
Sbjct: 356 GFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQA-AMGATGSNQAIYDGGYQNA-- 412
Query: 1372 AHQQLMYYQ* 1401
QQLMYYQ*
Sbjct: 413 --QQLMYYQ* 420
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 634 bits (1634), Expect = 6e-182
Identities = 324/430 (75%), Positives = 356/430 (82%), Gaps = 30/430 (6%)
Frame = +1
Query: 145 QQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDPTTCRSVYAGN 324
QQQQQQ MMQQALMQQ SLYHP L+A PPQ+EP+PSGNLPPGFDP+TCRSVY GN
Sbjct: 7 QQQQQQVMMQQALMQQ-QSLYHPGLLA-----PPQIEPIPSGNLPPGFDPSTCRSVYVGN 60
Query: 325 IHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGRHLFGQP 504
IH QVTE LLQE+FA TGPVESCKLIRK+KSSYGFVHYFDRRSAGLAI+SLNGRHLFGQP
Sbjct: 61 IHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQP 120
Query: 505 IKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSR 684
IKVNWAYA+GQREDTSSHFNIFVGDLSP+VTDA LF FS + TCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSR 180
Query: 685 GFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGS 864
GFGFVSFRNQQDAQ AI+E+ GKWL SRQIRCNWATKGAT GEDK SSD KSVVELT+G
Sbjct: 181 GFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGD 240
Query: 865 SEDGREISISNEEAPENNPQYTTVYVGNLAPEFLQVTQLDLHRLFHTLGAGVIEEVRVQR 1044
+D +N EAPENN QYTTVYVGNLAPE V+Q+DLHR FH+LGAGVIEEVRVQR
Sbjct: 241 GKD-----TTNGEAPENNAQYTTVYVGNLAPE---VSQVDLHRHFHSLGAGVIEEVRVQR 292
Query: 1045 DKGFGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPL-PPVPVAVP 1221
DKGFGFVRY+TH EAALAIQMGN+ +L RQ+KCSWG+KPTP GTASNPL PP P +P
Sbjct: 293 DKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIP 352
Query: 1222 GLSPMDLLAYERQLALAKM--------HPQAQHSLRHVNAAGASAA--AMYDGGFQNVAA 1371
G S DLLAYERQLA++KM HPQ QH+ + A GA+ + A+YDGG+QN
Sbjct: 353 GFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQA-AMGATGSNQAIYDGGYQNA-- 409
Query: 1372 AHQQLMYYQ* 1401
QQLMYYQ*
Sbjct: 410 --QQLMYYQ* 417
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 79 bits (194), Expect = 5e-015
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+FVG LS D++L ++F++F ++A V+ D++TGRSRGFGFVSF + A NAI EM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 745 NGKWLSSRQIRCNWATK 795
+GK L+ RQIR N AT+
Sbjct: 97 DGKELNGRQIRVNLATE 113
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 79 bits (194), Expect = 5e-015
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+FVG LS D++L ++F++F ++A V+ D++TGRSRGFGFVSF + A NAI EM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 745 NGKWLSSRQIRCNWATK 795
+GK L+ RQIR N AT+
Sbjct: 97 DGKELNGRQIRVNLATE 113
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 72 bits (174), Expect = 1e-012
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 745 NGKWLSSRQIRCN 783
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 72 bits (174), Expect = 1e-012
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 745 NGKWLSSRQIRCN 783
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 72 bits (174), Expect = 1e-012
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 745 NGKWLSSRQIRCN 783
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 72 bits (174), Expect = 1e-012
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 745 NGKWLSSRQIRCN 783
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein |
chr5:1192461-1195413 FORWARD
Length = 311
Score = 70 bits (170), Expect = 3e-012
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
IFVG LSP+VTD L +FS F D ++M ++ TGRSRGFGF++F +++ +I EM
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREM 68
Query: 745 NGKWLSSRQIRCNWATK--GATFGEDKHSSDGK 837
+G+ R I N A G GE S G+
Sbjct: 69 HGRDFGDRVISVNRAEPKLGRDDGESHGSRGGR 101
>TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:1212065-1213795 REVERSE
Length = 246
Score = 69 bits (168), Expect = 6e-012
Identities = 31/73 (42%), Positives = 51/73 (69%)
Frame = +1
Query: 559 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAIN 738
+ +F GDL +V D L ++F+ F T + A+V+ D++TG+++G+GFVSF N D A+
Sbjct: 137 YRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALK 196
Query: 739 EMNGKWLSSRQIR 777
EMNGK++ +R I+
Sbjct: 197 EMNGKYVGNRPIK 209
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 69 bits (167), Expect = 7e-012
Identities = 37/99 (37%), Positives = 58/99 (58%)
Frame = +1
Query: 493 FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKT 672
+G + ++ +G + S ++VG+LS V D AL F+ +ARV++D+ +
Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294
Query: 673 GRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWA 789
GRS+GFGFV+ + Q+ Q AIN +NG L RQIR + A
Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 69 bits (167), Expect = 7e-012
Identities = 37/99 (37%), Positives = 58/99 (58%)
Frame = +1
Query: 493 FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKT 672
+G + ++ +G + S ++VG+LS V D AL F+ +ARV++D+ +
Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294
Query: 673 GRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWA 789
GRS+GFGFV+ + Q+ Q AIN +NG L RQIR + A
Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 69 bits (166), Expect = 9e-012
Identities = 33/75 (44%), Positives = 53/75 (70%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
+++G LSP + +L ++FS+FN ++ARVM ++ TGRSRG+GFV+F ++ A +AI+ M
Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92
Query: 745 NGKWLSSRQIRCNWA 789
NG+ L+ I N A
Sbjct: 93 NGQELNGFNISVNVA 107
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 68 bits (165), Expect = 1e-011
Identities = 37/89 (41%), Positives = 53/89 (59%)
Frame = +1
Query: 523 YATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVS 702
Y G S ++VG+LS V D AL FS +ARV++D+ +GRS+GFGFV+
Sbjct: 192 YGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVT 251
Query: 703 FRNQQDAQNAINEMNGKWLSSRQIRCNWA 789
+ + Q+ QNAI ++G L RQIR + A
Sbjct: 252 YDSSQEVQNAIKSLDGADLDGRQIRVSEA 280
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 68 bits (164), Expect = 2e-011
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +1
Query: 565 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINEM 744
++VG+LSP TD L E+FS + DA VM D+ T RSRGFGFV++ + +A+ A++ M
Sbjct: 5 VYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGM 64
Query: 745 NGKWLSSRQI 774
+GK L+ R++
Sbjct: 65 DGKELNGRRV 74
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,173,142,472
Number of Sequences: 33410
Number of Extensions: 11173142472
Number of Successful Extensions: 370179375
Number of sequences better than 0.0: 0
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