BLASTX 7.6.2
Query= UN21454 /QuerySize=596
(595 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G15000.1 | Symbols: | 60S ribosomal protein L... 263 7e-071
TAIR9_protein||AT3G22230.1 | Symbols: | 60S ribosomal protein L... 253 5e-068
TAIR9_protein||AT4G15000.2 | Symbols: | 60S ribosomal protein L... 236 1e-062
TAIR9_protein||AT2G32220.1 | Symbols: | 60S ribosomal protein L... 231 3e-061
>TAIR9_protein||AT4G15000.1 | Symbols: | 60S ribosomal protein L27 (RPL27C) |
chr4:8571896-8572303 FORWARD
Length = 136
Score = 263 bits (671), Expect = 7e-071
Identities = 130/136 (95%), Positives = 134/136 (98%)
Frame = -2
Query: 564 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLKKYPSKVIRKDSAK 385
MVKFLKQNKAVILLQGRYAGKKAVII+SFDDGNR+RPYGHCLVAGLKKYPSKVIRKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 384 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALASKDKKVAALKEAKAKLEER 205
KTAKKSRVKCFIK+VNYQHLMPTRYTLDVDLKEVATL+AL SKDKKVAALKEAKAKLEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120
Query: 204 FKTGKNRWFFTKLRF* 157
FKTGKNRWFFTKLRF*
Sbjct: 121 FKTGKNRWFFTKLRF* 136
>TAIR9_protein||AT3G22230.1 | Symbols: | 60S ribosomal protein L27 (RPL27B) |
chr3:7844136-7844543 REVERSE
Length = 136
Score = 253 bits (646), Expect = 5e-068
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = -2
Query: 564 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLKKYPSKVIRKDSAK 385
MVKFLKQNKAVILLQGRYAGKKAVII+SFDDG +R YGHCLVAGLKKYPSKVIRKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 384 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALASKDKKVAALKEAKAKLEER 205
KTAKKSRVKCFIK+VNYQHLMPTRYTLDVDLKEVATL+AL SKDKKV ALKEAKAKLEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120
Query: 204 FKTGKNRWFFTKLRF* 157
FKTGKNRWFFTKLRF*
Sbjct: 121 FKTGKNRWFFTKLRF* 136
>TAIR9_protein||AT4G15000.2 | Symbols: | 60S ribosomal protein L27 (RPL27C) |
chr4:8571896-8572387 FORWARD
Length = 132
Score = 236 bits (600), Expect = 1e-062
Identities = 118/123 (95%), Positives = 122/123 (99%)
Frame = -2
Query: 564 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLKKYPSKVIRKDSAK 385
MVKFLKQNKAVILLQGRYAGKKAVII+SFDDGNR+RPYGHCLVAGLKKYPSKVIRKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 384 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALASKDKKVAALKEAKAKLEER 205
KTAKKSRVKCFIK+VNYQHLMPTRYTLDVDLKEVATL+AL SKDKKVAALKEAKAKLEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120
Query: 204 FKT 196
FKT
Sbjct: 121 FKT 123
>TAIR9_protein||AT2G32220.1 | Symbols: | 60S ribosomal protein L27 (RPL27A) |
chr2:13678945-13679352 FORWARD
Length = 136
Score = 231 bits (588), Expect = 3e-061
Identities = 111/136 (81%), Positives = 122/136 (89%)
Frame = -2
Query: 564 MVKFLKQNKAVILLQGRYAGKKAVIIRSFDDGNRERPYGHCLVAGLKKYPSKVIRKDSAK 385
MVK +K KAVILLQGRY GKKAVI++SFDDG E+ YGHCLVAGLKKYPSKVIRKDSAK
Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 384 KTAKKSRVKCFIKVVNYQHLMPTRYTLDVDLKEVATLEALASKDKKVAALKEAKAKLEER 205
KTAKKSRVKCF KV+NYQH+MPTRYTLD+DLK V + +A++SKDKKV ALKEAKAK EER
Sbjct: 61 KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120
Query: 204 FKTGKNRWFFTKLRF* 157
FKTGKNRWFFTKLRF*
Sbjct: 121 FKTGKNRWFFTKLRF* 136
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,173,142,472
Number of Sequences: 33410
Number of Extensions: 11173142472
Number of Successful Extensions: 370179375
Number of sequences better than 0.0: 0
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