BLASTX 7.6.2
Query= UN21529 /QuerySize=1103
(1102 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type)... 466 1e-131
TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type)... 466 1e-131
TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic a... 132 5e-031
TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic a... 132 5e-031
TAIR9_protein||AT3G21100.1 | Symbols: | RNA binding / nucleic a... 116 3e-026
TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic a... 116 3e-026
TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / ... 116 3e-026
TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / ... 108 9e-024
TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / ... 107 2e-023
TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type)... 95 6e-020
TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (... 64 1e-010
TAIR9_protein||AT1G51530.1 | Symbols: | RNA recognition motif (... 50 2e-006
>TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 466 bits (1198), Expect = 1e-131
Identities = 231/266 (86%), Positives = 241/266 (90%), Gaps = 5/266 (1%)
Frame = -2
Query: 1083 HYFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 904
+YFSTFGPVQDVRIPYQQKRMFGFVTF+YPETVKSILAKGNPHFVCDSRVLVKPYKEKGK
Sbjct: 277 NYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 336
Query: 903 VPDKYRTNQTTELELSPTGLDSSPRDVLGGRGFYNNPQDVIWRSKFEEEILELQSRRLMN 724
VPDKYRTNQTTE ELSPTGLDSSPRDVLGGRGFYNN QDV+WRSKFEEEILELQSRRLMN
Sbjct: 337 VPDKYRTNQTTERELSPTGLDSSPRDVLGGRGFYNNTQDVLWRSKFEEEILELQSRRLMN 396
Query: 723 LQLHDVKNHFQLNSSSTHIHSPNPFSQTLVSPRPGGV----KAGGEIGKGSSKEGSDDDT 556
LQL DVK HFQLN S T+IHSPNPFSQ+L+SPRP V GGE GKGSSKEGSDDDT
Sbjct: 397 LQLLDVKKHFQLN-SPTNIHSPNPFSQSLISPRPLSVIKREYDGGEKGKGSSKEGSDDDT 455
Query: 555 INLQEKLEECLPDSPFASSTNHLLLFADSVDNNGSDLWSPSSDNDDNSTPSTLSDSFNSF 376
+NL E+LE+ LPDSPFAS +HLLLFADS DNNGSDLWSPSSDNDDNSTPSTLSDSFNSF
Sbjct: 456 MNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDNDDNSTPSTLSDSFNSF 515
Query: 375 NCQMPRSPAFGMLPGRGGPACRVGI* 298
N QMPR PA GMLPGRGGP CRVGI*
Sbjct: 516 NYQMPRLPAIGMLPGRGGPTCRVGI* 541
>TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 466 bits (1198), Expect = 1e-131
Identities = 231/266 (86%), Positives = 241/266 (90%), Gaps = 5/266 (1%)
Frame = -2
Query: 1083 HYFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 904
+YFSTFGPVQDVRIPYQQKRMFGFVTF+YPETVKSILAKGNPHFVCDSRVLVKPYKEKGK
Sbjct: 277 NYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 336
Query: 903 VPDKYRTNQTTELELSPTGLDSSPRDVLGGRGFYNNPQDVIWRSKFEEEILELQSRRLMN 724
VPDKYRTNQTTE ELSPTGLDSSPRDVLGGRGFYNN QDV+WRSKFEEEILELQSRRLMN
Sbjct: 337 VPDKYRTNQTTERELSPTGLDSSPRDVLGGRGFYNNTQDVLWRSKFEEEILELQSRRLMN 396
Query: 723 LQLHDVKNHFQLNSSSTHIHSPNPFSQTLVSPRPGGV----KAGGEIGKGSSKEGSDDDT 556
LQL DVK HFQLN S T+IHSPNPFSQ+L+SPRP V GGE GKGSSKEGSDDDT
Sbjct: 397 LQLLDVKKHFQLN-SPTNIHSPNPFSQSLISPRPLSVIKREYDGGEKGKGSSKEGSDDDT 455
Query: 555 INLQEKLEECLPDSPFASSTNHLLLFADSVDNNGSDLWSPSSDNDDNSTPSTLSDSFNSF 376
+NL E+LE+ LPDSPFAS +HLLLFADS DNNGSDLWSPSSDNDDNSTPSTLSDSFNSF
Sbjct: 456 MNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDNDDNSTPSTLSDSFNSF 515
Query: 375 NCQMPRSPAFGMLPGRGGPACRVGI* 298
N QMPR PA GMLPGRGGP CRVGI*
Sbjct: 516 NYQMPRLPAIGMLPGRGGPTCRVGI* 541
>TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 132 bits (331), Expect = 5e-031
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = -2
Query: 1080 YFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKV 901
YFSTFGPVQDVRIPYQQKRMFGFVTF+YPETVKSILAKGNPHFVC SRVLVKPYKEKGKV
Sbjct: 175 YFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKV 234
Query: 900 PDKYRTNQ 877
PDK + ++
Sbjct: 235 PDKTKPSR 242
Score = 71 bits (173), Expect = 1e-012
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = -2
Query: 570 SDDDTINLQEKLE-ECLPDSPFASSTNHLLLFADSVDNNGSDLWSPSSDNDDNSTPSTLS 394
+D+DTI L E LE + L DSP S +H L + + GS L SPS D D++ST TL
Sbjct: 314 NDEDTIKLPESLEDDRLVDSPIVSPKHHFLECGVAAETKGSGLSSPSFDQDESST-GTLK 372
Query: 393 DSFNSFNCQMPRSPAFGMLPGRGGP-ACRVGI* 298
+ S CQMPR G+ G GP CRVGI*
Sbjct: 373 EPLKSLKCQMPRLSMMGITQGSSGPTTCRVGI* 405
Score = 62 bits (148), Expect = 8e-010
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -2
Query: 822 LGGRGFYNNPQDVIWRSKFEEEILELQSRRLMNLQLHDVKNHFQLNSSSTHIHSP 658
LGGR F+ +D++W+ +FEE LELQS RLMNLQL DV+ FQLN T + SP
Sbjct: 249 LGGRAFH---EDLLWKRRFEERALELQSTRLMNLQLLDVEKQFQLNFDQTLLVSP 300
>TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 132 bits (331), Expect = 5e-031
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = -2
Query: 1080 YFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKV 901
YFSTFGPVQDVRIPYQQKRMFGFVTF+YPETVKSILAKGNPHFVC SRVLVKPYKEKGKV
Sbjct: 175 YFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKV 234
Query: 900 PDKYRTNQ 877
PDK + ++
Sbjct: 235 PDKTKPSR 242
Score = 71 bits (173), Expect = 1e-012
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = -2
Query: 570 SDDDTINLQEKLE-ECLPDSPFASSTNHLLLFADSVDNNGSDLWSPSSDNDDNSTPSTLS 394
+D+DTI L E LE + L DSP S +H L + + GS L SPS D D++ST TL
Sbjct: 314 NDEDTIKLPESLEDDRLVDSPIVSPKHHFLECGVAAETKGSGLSSPSFDQDESST-GTLK 372
Query: 393 DSFNSFNCQMPRSPAFGMLPGRGGP-ACRVGI* 298
+ S CQMPR G+ G GP CRVGI*
Sbjct: 373 EPLKSLKCQMPRLSMMGITQGSSGPTTCRVGI* 405
Score = 62 bits (148), Expect = 8e-010
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -2
Query: 822 LGGRGFYNNPQDVIWRSKFEEEILELQSRRLMNLQLHDVKNHFQLNSSSTHIHSP 658
LGGR F+ +D++W+ +FEE LELQS RLMNLQL DV+ FQLN T + SP
Sbjct: 249 LGGRAFH---EDLLWKRRFEERALELQSTRLMNLQLLDVEKQFQLNFDQTLLVSP 300
>TAIR9_protein||AT3G21100.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7400426-7401870 FORWARD
Length = 297
Score = 116 bits (290), Expect = 3e-026
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = -2
Query: 1083 HYFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 904
+YF FGPVQDVRIPYQQKRMFGFVTFL+ ETV+ ILA+GNPHF+CDSRVLVKPYKEKG+
Sbjct: 31 NYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGR 90
Query: 903 VPDKYRTNQ 877
+ +K + Q
Sbjct: 91 ILEKRQQQQ 99
>TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7399162-7401870 FORWARD
Length = 603
Score = 116 bits (290), Expect = 3e-026
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = -2
Query: 1083 HYFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 904
+YF FGPVQDVRIPYQQKRMFGFVTFL+ ETV+ ILA+GNPHF+CDSRVLVKPYKEKG+
Sbjct: 337 NYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGR 396
Query: 903 VPDKYRTNQ 877
+ +K + Q
Sbjct: 397 ILEKRQQQQ 405
>TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / nucleotide
binding / zinc ion binding | chr5:4035891-4038604 REVERSE
Length = 651
Score = 116 bits (290), Expect = 3e-026
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = -2
Query: 1080 YFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKV 901
YFS FG VQDVRIPYQQKRMFGFV+F +PETVK +LA+GNPHF+CDSRVLVKPYKEKGKV
Sbjct: 377 YFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKV 436
Query: 900 PDK 892
DK
Sbjct: 437 LDK 439
>TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19109093 FORWARD
Length = 514
Score = 108 bits (268), Expect = 9e-024
Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Frame = -2
Query: 1080 YFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKV 901
YF FG V DVRIPYQQ+RM+GFVTF ETV++ILA+GNPHF+CDSRVLVKPYKEKGK+
Sbjct: 286 YFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKI 345
Query: 900 PDKYRTNQTTELELSPTGLDSSPRDVLGGRGFYNNPQDVIWRSKFEEEILELQSRRLMNL 721
K + Q EL SS R Y SK +E+L ++ + +L
Sbjct: 346 LQKRQQQQLHELLERGNYSPSSSPSGKDSRELYECRLGPRMFSKKTQEMLRRKTEQ-ADL 404
Query: 720 QLHDVKNHFQLNSSSTHIHSPNPFSQTLV 634
Q H ++ + S S H P F+ +L+
Sbjct: 405 Q-HAIERSPSIGSPS---HFPPRFNHSLL 429
>TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19108533 FORWARD
Length = 415
Score = 107 bits (266), Expect = 2e-023
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = -2
Query: 1080 YFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKV 901
YF FG V DVRIPYQQ+RM+GFVTF ETV++ILA+GNPHF+CDSRVLVKPYKEKGK+
Sbjct: 286 YFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKI 345
Query: 900 PDKYRTNQTTEL 865
K + Q EL
Sbjct: 346 LQKRQQQQLHEL 357
>TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein | chr2:1859011-1860931
REVERSE
Length = 537
Score = 95 bits (235), Expect = 6e-020
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = -2
Query: 1080 YFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLVKPYKEKGK 904
YF+++G V+DVRIP QQKRM+GFVTF ETVK ILAKGNPHF+C++RVLVKPY+EK +
Sbjct: 337 YFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKSR 395
>TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19645660-19646962 FORWARD
Length = 382
Score = 64 bits (155), Expect = 1e-010
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = -2
Query: 1083 HYFSTFGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAK 967
+YFS GPV+DVRIP QQKRM+GFVTF+Y ETVK ILAK
Sbjct: 324 NYFSEVGPVEDVRIPCQQKRMYGFVTFVYMETVKRILAK 362
>TAIR9_protein||AT1G51530.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:19109854-19112152 FORWARD
Length = 392
Score = 50 bits (119), Expect = 2e-006
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = -2
Query: 1068 FGPVQDVRIPYQQKRMFGFVTFLYPETVKSILAKGNPHFVCDSRVLV 928
FGPV VRIP Q+++++GFV+F ETV +IL + NPH + +S V V
Sbjct: 186 FGPVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPVNV 232
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,216,442,250
Number of Sequences: 33410
Number of Extensions: 11216442250
Number of Successful Extensions: 370234565
Number of sequences better than 0.0: 0
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