BLASTX 7.6.2
Query= UN21541 /QuerySize=934
(933 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G51510.1 | Symbols: Y14 | Y14; RNA binding / p... 326 2e-089
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 60 2e-009
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 60 2e-009
TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, pu... 51 8e-007
TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, pu... 51 8e-007
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 49 3e-006
TAIR9_protein||AT3G50670.1 | Symbols: U1-70K, U1SNRNP | U1-70K (... 49 4e-006
TAIR9_protein||AT2G21440.1 | Symbols: | RNA recognition motif (... 48 7e-006
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 48 9e-006
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 48 9e-006
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 48 9e-006
TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related... 48 9e-006
TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related... 48 9e-006
>TAIR9_protein||AT1G51510.1 | Symbols: Y14 | Y14; RNA binding / protein binding
| chr1:19103072-19104753 REVERSE
Length = 203
Score = 326 bits (834), Expect = 2e-089
Identities = 164/204 (80%), Positives = 185/204 (90%), Gaps = 5/204 (2%)
Frame = -2
Query: 872 MANLEPEAVDFEPEEDDLMDEDSAA---ADLSPRAANPRLRSTIAGANDDSAQRKTKGRG 702
MAN+E EAVDFEPEEDDLMDE+ A AD+SPRA +PRL+S IAGAN +SA +KTKGRG
Sbjct: 1 MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESA-KKTKGRG 59
Query: 701 FREEKDSDRQRRLSSRDFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFG 522
FREEKDSDRQRRLSSRDF+SLGSDG PGPQRS+EGWIILV+GVHEE QE+DI+NAFGDFG
Sbjct: 60 FREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFG 119
Query: 521 EIKSLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGPNAG 342
EIK+L+LNLDRR+G+VKGYALIEYEK EEAQ+AI AMNGAELLTQNVSVDWAFS+GP+ G
Sbjct: 120 EIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGG 179
Query: 341 -SYRRRNMRSGRSQRSRSPRRRF* 273
SYRR+N R GRSQRSRSPRRR+*
Sbjct: 180 ESYRRKNSRYGRSQRSRSPRRRY* 203
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 60 bits (144), Expect = 2e-009
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Frame = -2
Query: 629 GGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEY 450
G GP + + +LV + DD+ F +G++ + + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 449 EKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGPNAGSYRRRNM----RSGRSQRSRSPRR 282
+ +EA A++ ++G + + ++V +A GPNA + + R RSRSPRR
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFA-KYGPNAEKISKGRVVEPPPKSRRSRSRSPRR 123
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 60 bits (144), Expect = 2e-009
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Frame = -2
Query: 629 GGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEY 450
G GP + + +LV + DD+ F +G++ + + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 449 EKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGPNAGSYRRRNM----RSGRSQRSRSPRR 282
+ +EA A++ ++G + + ++V +A GPNA + + R RSRSPRR
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFA-KYGPNAEKISKGRVVEPPPKSRRSRSRSPRR 123
>TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 430
Score = 51 bits (121), Expect = 8e-007
Identities = 24/89 (26%), Positives = 44/89 (49%)
Frame = -2
Query: 590 ILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAM 411
+ + + E ++ +++ F FG++ S + +D+ TG K + I Y+ AQNAI M
Sbjct: 332 LFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTM 391
Query: 410 NGAELLTQNVSVDWAFSNGPNAGSYRRRN 324
NG +L + + V NG + +N
Sbjct: 392 NGCQLSGKKLKVQLKRDNGQQQQQQQSKN 420
>TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 439
Score = 51 bits (121), Expect = 8e-007
Identities = 24/89 (26%), Positives = 44/89 (49%)
Frame = -2
Query: 590 ILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAM 411
+ + + E ++ +++ F FG++ S + +D+ TG K + I Y+ AQNAI M
Sbjct: 341 LFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTM 400
Query: 410 NGAELLTQNVSVDWAFSNGPNAGSYRRRN 324
NG +L + + V NG + +N
Sbjct: 401 NGCQLSGKKLKVQLKRDNGQQQQQQQSKN 429
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 49 bits (116), Expect = 3e-006
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = -2
Query: 689 KDSDRQRRLSSRDFDSLGSD-GGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIK 513
K D R F S GS GG G + G + V + + + + F + G++
Sbjct: 172 KREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVV 231
Query: 512 SLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGP 351
+ DR +G KG+ + Y+ S+E QNAIK+++GA+L + + V A + P
Sbjct: 232 EARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285
>TAIR9_protein||AT3G50670.1 | Symbols: U1-70K, U1SNRNP | U1-70K (U1 SMALL
NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleic acid binding /
nucleotide binding | chr3:18826476-18829492 REVERSE
Length = 428
Score = 49 bits (115), Expect = 4e-006
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = -2
Query: 590 ILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAM 411
+ V+ ++ E+ E I F +G IK +HL D+ T KGYA IEY + + + A K
Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199
Query: 410 NGAELLTQNVSVDWAFSNGPNAGSYRRRNMRSG 312
+G ++ + V VD G ++R R + G
Sbjct: 200 DGQKIDGRRVLVD--VERGRTVPNWRPRRLGGG 230
>TAIR9_protein||AT2G21440.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:9173712-9179065 REVERSE
Length = 1004
Score = 48 bits (113), Expect = 7e-006
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = -2
Query: 629 GGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEY 450
GG G + + W +++ + +A+ DI F G + + + + TG KG+A +++
Sbjct: 322 GGEGSK--AQKWKLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKF 379
Query: 449 EKSEEAQNAIKAMNGAELLTQNVSVDWA 366
++A NAIK NG + ++VDWA
Sbjct: 380 TCKKDAANAIKKFNGHMFGKRPIAVDWA 407
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 48 bits (112), Expect = 9e-006
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = -2
Query: 635 SDGGPGPQRSIEGWI------ILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFV 474
S GP S+ G + + V G+ + + AF FGE+ + DR TG
Sbjct: 16 SQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRS 75
Query: 473 KGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWA 366
+G+ + + + A NAIK M+G EL + + V+ A
Sbjct: 76 RGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLA 111
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 48 bits (112), Expect = 9e-006
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = -2
Query: 635 SDGGPGPQRSIEGWI------ILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFV 474
S GP S+ G + + V G+ + + AF FGE+ + DR TG
Sbjct: 16 SQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRS 75
Query: 473 KGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWA 366
+G+ + + + A NAIK M+G EL + + V+ A
Sbjct: 76 RGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLA 111
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 48 bits (112), Expect = 9e-006
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = -2
Query: 641 LGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYA 462
LGS P + + + + + ++D + N F FGEI + DR TG KGY
Sbjct: 465 LGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 524
Query: 461 LIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGP 351
++Y + A A++AMNG + ++V A + P
Sbjct: 525 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPP 561
>TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 48 bits (112), Expect = 9e-006
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = -2
Query: 641 LGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYA 462
LGS P + + + + + ++D + N F FGEI + DR TG KGY
Sbjct: 465 LGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 524
Query: 461 LIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGP 351
++Y + A A++AMNG + ++V A + P
Sbjct: 525 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPP 561
>TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 48 bits (112), Expect = 9e-006
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = -2
Query: 641 LGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYA 462
LGS P + + + + + ++D + N F FGEI + DR TG KGY
Sbjct: 465 LGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 524
Query: 461 LIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGP 351
++Y + A A++AMNG + ++V A + P
Sbjct: 525 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPP 561
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,216,442,250
Number of Sequences: 33410
Number of Extensions: 11216442250
Number of Successful Extensions: 370234565
Number of sequences better than 0.0: 0
|
