BLASTX 7.6.2
Query= UN21602 /QuerySize=1660
(1659 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protei... 116 6e-025
sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protei... 83 5e-015
sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing prote... 81 2e-014
sp|Q00808|HETE1_PODAN Vegetative incompatibility protein HET-E-1... 78 2e-013
sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase pk... 72 1e-011
sp|Q8YRI1|YY46_ANASP Uncharacterized WD repeat-containing protei... 68 2e-010
sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS... 65 1e-009
sp|Q8YV57|Y2124_ANASP Uncharacterized WD repeat-containing prote... 64 3e-009
sp|O74855|YQ95_SCHPO Uncharacterized WD repeat-containing protei... 61 2e-008
sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S... 59 7e-008
sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S... 59 7e-008
sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I)/G(S... 59 7e-008
sp|Q6PH57|GBB1_DANRE Guanine nucleotide-binding protein G(I)/G(S... 59 7e-008
sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subun... 56 6e-007
sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subun... 56 8e-007
sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa ... 54 2e-006
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe GN=SPBC2A9.03 PE=2 SV=2
Length = 426
Score = 116 bits (289), Expect = 6e-025
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Frame = +2
Query: 830 FMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQ 1009
F+ ND V D++R + ++R VN L + L V D + +L+D +
Sbjct: 233 FILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLALVCTDSKDAMLIDIRSNS 292
Query: 1010 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRSIRF 1189
L H D +WHPNG ATG QD T ++WD R +S L + A+ ++ F
Sbjct: 293 VSAKLP-HSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCF 351
Query: 1190 TSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGS 1369
+ G +A+ E ADFV ++DTK + Q IDFFGEI+G ++S +SLFIGV D G
Sbjct: 352 SPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTAYSSSGDSLFIGVDDPMLGG 410
Query: 1370 LLEYGR 1387
+LE+ R
Sbjct: 411 ILEFRR 416
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1
Length = 395
Score = 83 bits (204), Expect = 5e-015
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Frame = +2
Query: 776 NAITNAVDIYRNSSGALHFMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLV 955
NA ++ + S + + + DC ++ + M+ L + +N S S D KL+
Sbjct: 104 NAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSKLI 163
Query: 956 AVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTS 1135
DD + D S+G+ + TLKGH +Y F ++P+G A+G+ D+T RIW R
Sbjct: 164 VSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCAR-NG 222
Query: 1136 ESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEID-FFGEISGIS 1312
++ + G+ + S+ F DG Y+A V ++D+ TG + ID I+ +
Sbjct: 223 NTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVK 282
Query: 1313 FSPDTESLFIGVWDRTYGSLLEYGRTR 1393
FSP+ + + + T L +Y + R
Sbjct: 283 FSPNGKYILASNLNNTL-KLWDYQKLR 308
>sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing protein alr2800
OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 81 bits (198), Expect = 2e-014
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Frame = +2
Query: 848 DCGVRDFDMERYQ-LVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTL 1024
DC V+ +++ Q L L + + + SPDG+L+A D + L D G+ +G L
Sbjct: 1041 DCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGIL 1100
Query: 1025 KGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGR 1204
+GH + +++ + PNG AT + D+T +IWD ++ + + L G+ + I F+ DG+
Sbjct: 1101 RGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ-GKCLKTLTGHTNWVFDIAFSPDGK 1159
Query: 1205 YIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDRT 1360
+A A V ++D TG I +S ++FSPD E + G D+T
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQT 1211
Score = 80 bits (197), Expect = 3e-014
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Frame = +2
Query: 842 NNDCGVRDFDMERYQLVQLFR--YLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTI 1015
+ DC VR ++++ +L+ + R W V SPDG+++A G D N L +G I
Sbjct: 661 DTDCHVRVWEVKSGKLLLICRGHSNW-VRFVVFSPDGEILASCGADENVKLWSVRDGVCI 719
Query: 1016 GTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTS 1195
TL GH F+ A+HP+G T A+ + DKT ++WD + + L G+ +R + F+
Sbjct: 720 KTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDI-QDGTCLQTLTGHTDWVRCVAFSP 778
Query: 1196 DGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDRT 1360
DG +A + + ++D G G + ++FS D ++L G DRT
Sbjct: 779 DGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRT 833
Score = 65 bits (158), Expect = 1e-009
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +2
Query: 935 SPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 1114
SP+G+++A D + D G+ + TL GH ++ F A+ P+G A+ + D+T RI
Sbjct: 1113 SPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRI 1172
Query: 1115 WDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTG 1261
WD T + + G+ + S+ F+ DG +A V +++ KTG
Sbjct: 1173 WDV-NTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTG 1220
>sp|Q00808|HETE1_PODAN Vegetative incompatibility protein HET-E-1 OS=Podospora
anserina GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 78 bits (190), Expect = 2e-013
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
V + SPDG+ VA DD + D+++G TL+GH + A+ P+G A+G+
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG 987
Query: 1097 DKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQ 1276
DKT +IWDT + L G+ G++ S+ F+ DG+ +A + ++DT +G +
Sbjct: 988 DKTIKIWDT-ASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQT 1046
Query: 1277 EIDFFGEISGISFSPDTESLFIG-------VWDRTYGS 1369
G + + FSPD + + G +WD G+
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGT 1084
Score = 71 bits (173), Expect = 2e-011
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Frame = +2
Query: 929 SLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTC 1108
+ SPDG+ VA D + D+++G TL+GH ++ A+ P+G A+G+ DKT
Sbjct: 974 AFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTI 1033
Query: 1109 RIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDF 1288
+IWDT + L G+ G ++S+ F+ DG+ +A + ++D +G +
Sbjct: 1034 KIWDT-ASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGH 1092
Query: 1289 FGEISGISFSPDTESLFIG-------VWDRTYGS 1369
+ ++FSPD + + G +WD G+
Sbjct: 1093 GDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGT 1126
Score = 68 bits (164), Expect = 2e-010
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
V+ + SPDG+ VA D + D+++G TL+GH + + A+ P+G A+G+
Sbjct: 1138 VHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS 1197
Query: 1097 DKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTG 1261
DKT +IWDT + L G+ G ++S+ F+ DG+ +A + + ++DT +G
Sbjct: 1198 DKTIKIWDT-ASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASG 1251
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase pkwA
OS=Thermomonospora curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 72 bits (174), Expect = 1e-011
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Frame = +2
Query: 818 GALHFMASNNDCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPNGLLVD 994
GAL + ++D VR +D+ + +F + V + SPDG +VA D L +
Sbjct: 513 GAL-LASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWN 571
Query: 995 SSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAI 1174
+ G LKGH DY +A A+ P+G A+G++D T R+WD T + VL+ +
Sbjct: 572 VATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDV-ATGKERDVLQAPAENV 630
Query: 1175 RSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWD 1354
S+ F+ DG + + VH++D +G + ++FSPD L G D
Sbjct: 631 VSLAFSPDGSMLVHGSDST-VHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDD 689
Query: 1355 RT 1360
RT
Sbjct: 690 RT 691
>sp|Q8YRI1|YY46_ANASP Uncharacterized WD repeat-containing protein alr3466
OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 68 bits (165), Expect = 2e-010
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 935 SPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 1114
SPDG ++A GDD L D S+G + TL+G+ + + PNGVT A G+ D+ R+
Sbjct: 1083 SPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRL 1142
Query: 1115 WDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFG 1294
WD + + + L+G+ + ++ F+ DG +A V ++D +
Sbjct: 1143 WDI-SSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTS 1201
Query: 1295 EISGISFSPDTESLFIGVWDRT 1360
++ + F+PD +L G D+T
Sbjct: 1202 WVNSVVFNPDGSTLASGSSDQT 1223
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 65 bits (157), Expect = 1e-009
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
V ++SPDG+LVA D L D+ G + +GHLD ++ A+ P+G + A+G+
Sbjct: 418 VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSL 477
Query: 1097 DKTCRIWD---TRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYR 1267
DK+ ++WD +R S A G+ + S+ F+ DG ++ V +D + G
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 1268 KEQEIDFFGEISGISFSPDTES 1333
+ ++ SP S
Sbjct: 538 HMMLQGHKNSVISVALSPKNNS 559
>sp|Q8YV57|Y2124_ANASP Uncharacterized WD repeat-containing protein all2124
OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1
Length = 1683
Score = 64 bits (154), Expect = 3e-009
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
VN + SPDGK +A D L + S+G+ TLKGH D F ++ P+G A+ +
Sbjct: 1449 VNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASA 1508
Query: 1097 DKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQ 1276
DKT R+WD+ + + L + + S+ F DG +A V ++ + G+
Sbjct: 1509 DKTIRLWDS-FSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHT 1567
Query: 1277 EIDFFGEISGISFSPDTESLFIGVWDRT 1360
+ SFSPD + D+T
Sbjct: 1568 FSGHSNVVYSSSFSPDGRYIASASEDKT 1595
>sp|O74855|YQ95_SCHPO Uncharacterized WD repeat-containing protein C18.05c
OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1
Length = 502
Score = 61 bits (147), Expect = 2e-008
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
VNH+S SPDG+ +A D + L D G+ + TL+GH+ + AW + + +Q
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQ 451
Query: 1097 DKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIA 1213
D T ++WD R + + L G+ + ++ ++ DG+ +A
Sbjct: 452 DTTLKVWDVR-SKKMKFDLPGHEDQVFAVDWSPDGQRVA 489
>sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit
beta-1 OS=Bos taurus GN=GNB1 PE=1 SV=3
Length = 340
Score = 59 bits (142), Expect = 7e-008
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Frame = +2
Query: 833 MASNNDCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQ 1009
+ S+ D +D+E Q F + V SL+PD +L D + L D G
Sbjct: 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 1010 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGN-LGAIRSIR 1186
T GH A + PNG FATG+ D TCR++D R E + N + I S+
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 1187 FTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWD 1354
F+ GR + +V+D R +S + + D ++ G WD
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
>sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit
beta-1 OS=Canis familiaris GN=GNB1 PE=2 SV=3
Length = 340
Score = 59 bits (142), Expect = 7e-008
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Frame = +2
Query: 833 MASNNDCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQ 1009
+ S+ D +D+E Q F + V SL+PD +L D + L D G
Sbjct: 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 1010 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGN-LGAIRSIR 1186
T GH A + PNG FATG+ D TCR++D R E + N + I S+
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 1187 FTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWD 1354
F+ GR + +V+D R +S + + D ++ G WD
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
>sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit
beta-1 OS=Cricetulus griseus GN=GNB1 PE=2 SV=3
Length = 340
Score = 59 bits (142), Expect = 7e-008
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Frame = +2
Query: 833 MASNNDCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQ 1009
+ S+ D +D+E Q F + V SL+PD +L D + L D G
Sbjct: 158 VTSSEDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 1010 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGN-LGAIRSIR 1186
T GH A + PNG FATG+ D TCR++D R E + N + I S+
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 1187 FTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWD 1354
F+ GR + +V+D R +S + + D ++ G WD
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
>sp|Q6PH57|GBB1_DANRE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit
beta-1 OS=Danio rerio GN=gnb1 PE=2 SV=1
Length = 340
Score = 59 bits (142), Expect = 7e-008
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Frame = +2
Query: 833 MASNNDCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQ 1009
+ S+ D +D+E Q F + V SL+PD +L D + L D G
Sbjct: 158 VTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 1010 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGN-LGAIRSIR 1186
T GH A + PNG FATG+ D TCR++D R E + N + I S+
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVA 277
Query: 1187 FTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWD 1354
F+ GR + +V+D R +S + + D ++ G WD
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo
sapiens GN=TAF5 PE=1 SV=3
Length = 800
Score = 56 bits (134), Expect = 6e-007
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Frame = +2
Query: 779 AITNAVDIYRNSSGALHFMASNNDCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLV 955
A N + NS+ + + D VR +D+ V++F + P++ + SP+G+ +
Sbjct: 628 ADVNCTRFHPNSN---YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFL 684
Query: 956 AVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTS 1135
A D LL D +G +G LKGH D + + +G A+G+ D T R+WD K
Sbjct: 685 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAF 744
Query: 1136 ESV-----AVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTK 1255
E + G++ + + G Y+ + P VH++ T+
Sbjct: 745 EDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV--VHLHFTR 787
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus
musculus GN=Taf5 PE=2 SV=1
Length = 801
Score = 56 bits (133), Expect = 8e-007
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Frame = +2
Query: 848 DCGVRDFDMERYQLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTL 1024
D VR +D+ V++F + P++ + SP+G+ +A D LL D +G +G L
Sbjct: 649 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 708
Query: 1025 KGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESV-----AVLRGNLGAIRSIRF 1189
KGH D + + +G A+G+ D T R+WD K E + G++ + +
Sbjct: 709 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQE 768
Query: 1190 TSDGRYIAMAEPADFVHVYDTK 1255
G Y+ + P VH++ T+
Sbjct: 769 LLLGTYMTKSTPV--VHLHFTR 788
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos
taurus GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 54 bits (129), Expect = 2e-006
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = +2
Query: 995 SSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAI 1174
SS I L GH + +HPNG T A+ D+ +W+ ++ A L+G+ GA+
Sbjct: 54 SSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 113
Query: 1175 RSIRFTSDGRYIAMAEPADFVHVYDTKTGYR 1267
+ + +DG + A V V+D++TG R
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGER 144
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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