BLASTX 7.6.2
Query= UN21602 /QuerySize=1660
(1659 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family pro... 851 2e-247
TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family pro... 843 7e-245
TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family pro... 685 2e-197
TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family pro... 675 3e-194
TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular... 516 2e-146
TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family pro... 485 6e-137
TAIR9_protein||AT3G49660.1 | Symbols: | transducin family prote... 69 1e-011
TAIR9_protein||AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATE... 64 2e-010
TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding | ch... 58 2e-008
TAIR9_protein||AT2G43770.1 | Symbols: | transducin family prote... 57 2e-008
TAIR9_protein||AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nu... 54 2e-007
TAIR9_protein||AT4G02730.1 | Symbols: | transducin family prote... 53 4e-007
TAIR9_protein||AT5G52820.1 | Symbols: | WD-40 repeat family pro... 51 2e-006
TAIR9_protein||AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 ... 50 4e-006
TAIR9_protein||AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 ... 50 4e-006
TAIR9_protein||AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 ... 50 4e-006
TAIR9_protein||AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 ... 50 4e-006
>TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22742563-22744909 FORWARD
Length = 442
Score = 851 bits (2198), Expect = 2e-247
Identities = 410/442 (92%), Positives = 430/442 (97%)
Frame = +2
Query: 98 MADFDEYMADEYDMDDLEDEMNAEFDARDIDASDSEVEDLEQLNKAADTSAAQARNGKDI 277
MADFDEYMADEYDMDDLED+MNA FD RDIDASDSEVED +QLNKAADTSAAQARNGKDI
Sbjct: 1 MADFDEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFDQLNKAADTSAAQARNGKDI 60
Query: 278 QGIPWDRLSVTRKDYRKTRLEQYKNYENVPHSGEEAGKHCTDTEKGSSFYTFRSNSRSVR 457
QGIPWD L++TRKDYRKTRLEQYKNYEN+P+SG+E+ K C +TEKGSSFY FR NSRSVR
Sbjct: 61 QGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVR 120
Query: 458 STILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGSRNEILNVKGHVAPSEKHPESLLE 637
STILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTG R+EILNVKGHVAPSEKHPESLLE
Sbjct: 121 STILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKHPESLLE 180
Query: 638 GFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSS 817
GFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSS
Sbjct: 181 GFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSS 240
Query: 818 GALHFMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDS 997
GALHFMASNNDCGVRDFDMERY+LVQLFRYLWPVNHSSLSPDGKLVAVVGDDP+GLLVD+
Sbjct: 241 GALHFMASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDT 300
Query: 998 SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIR 1177
SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRK SESVAVL+GNLGA+R
Sbjct: 301 SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVR 360
Query: 1178 SIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDR 1357
SIRFTSDGRY+AMAEPADFVH+YDTK+GY+KEQEIDFFGEISGISFSPDTESLFIGVWDR
Sbjct: 361 SIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLFIGVWDR 420
Query: 1358 TYGSLLEYGRTRDYSYLDSLL* 1423
TYGSLLEYGRTRDY+YLDSLL*
Sbjct: 421 TYGSLLEYGRTRDYTYLDSLL* 442
>TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22742654-22744909 FORWARD
Length = 448
Score = 843 bits (2177), Expect = 7e-245
Identities = 406/438 (92%), Positives = 426/438 (97%)
Frame = +2
Query: 110 DEYMADEYDMDDLEDEMNAEFDARDIDASDSEVEDLEQLNKAADTSAAQARNGKDIQGIP 289
DEYMADEYDMDDLED+MNA FD RDIDASDSEVED +QLNKAADTSAAQARNGKDIQGIP
Sbjct: 11 DEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFDQLNKAADTSAAQARNGKDIQGIP 70
Query: 290 WDRLSVTRKDYRKTRLEQYKNYENVPHSGEEAGKHCTDTEKGSSFYTFRSNSRSVRSTIL 469
WD L++TRKDYRKTRLEQYKNYEN+P+SG+E+ K C +TEKGSSFY FR NSRSVRSTIL
Sbjct: 71 WDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRSTIL 130
Query: 470 HFQLRNLVWATSKHDVYLLSNYSISHWSSLTGSRNEILNVKGHVAPSEKHPESLLEGFTE 649
HFQLRNLVWATSKHDVYLLSNYSISHWSSLTG R+EILNVKGHVAPSEKHPESLLEGFTE
Sbjct: 131 HFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKHPESLLEGFTE 190
Query: 650 TQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALH 829
TQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALH
Sbjct: 191 TQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALH 250
Query: 830 FMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQ 1009
FMASNNDCGVRDFDMERY+LVQLFRYLWPVNHSSLSPDGKLVAVVGDDP+GLLVD+SNGQ
Sbjct: 251 FMASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQ 310
Query: 1010 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRSIRF 1189
TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRK SESVAVL+GNLGA+RSIRF
Sbjct: 311 TIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRF 370
Query: 1190 TSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGS 1369
TSDGRY+AMAEPADFVH+YDTK+GY+KEQEIDFFGEISGISFSPDTESLFIGVWDRTYGS
Sbjct: 371 TSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGS 430
Query: 1370 LLEYGRTRDYSYLDSLL* 1423
LLEYGRTRDY+YLDSLL*
Sbjct: 431 LLEYGRTRDYTYLDSLL* 448
>TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family protein |
chr3:4332370-4334603 FORWARD
Length = 448
Score = 685 bits (1767), Expect = 2e-197
Identities = 326/442 (73%), Positives = 383/442 (86%), Gaps = 2/442 (0%)
Frame = +2
Query: 104 DFDEYMAD-EYDMDDLEDEMNAEFDARDIDASDSEVEDLE-QLNKAADTSAAQARNGKDI 277
D EYM D + +M+D+ED+M+ EF D+ ASDS+VE+ + NK ADT+A QAR GKDI
Sbjct: 7 DDAEYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQARKGKDI 66
Query: 278 QGIPWDRLSVTRKDYRKTRLEQYKNYENVPHSGEEAGKHCTDTEKGSSFYTFRSNSRSVR 457
QGIPWDRL+++R+ YR+TRLEQYKNYENVP+SGE + K C T+KG FY F NSRS++
Sbjct: 67 QGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWRNSRSIK 126
Query: 458 STILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGSRNEILNVKGHVAPSEKHPESLLE 637
STILHFQLRNLVWATSKHDVYL+SN+ ++H+SSLT ++E+LNV+GHVAPSEKHP SLLE
Sbjct: 127 STILHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNVRGHVAPSEKHPGSLLE 186
Query: 638 GFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSS 817
GFT+TQVSTLAVK+ LVAGGFQGELICKHLDRPGVSFCSR TY +NAITNA++IY S
Sbjct: 187 GFTQTQVSTLAVKDDFLVAGGFQGELICKHLDRPGVSFCSRMTYDDNAITNAIEIYNKPS 246
Query: 818 GALHFMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDS 997
GALHF ASNNDCGVRDFDMERYQLV+ FR+ WPVNH+SLSPDGKL+A+VGD+P GL+VD
Sbjct: 247 GALHFTASNNDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDP 306
Query: 998 SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIR 1177
+ G+T+ TL GHLD+SFASAWHP+GVTF+TGNQDKTCR+WD R S+SV VL+GNLGAIR
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIR 366
Query: 1178 SIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDR 1357
SIR+TSDG+Y+AMAEPADFVHVYD GY EQEIDFFGEISGISFSPDTE+LFIGVWDR
Sbjct: 367 SIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDR 426
Query: 1358 TYGSLLEYGRTRDYSYLDSLL* 1423
TYGSLLE+GR R+YSYLDS L*
Sbjct: 427 TYGSLLEFGRRRNYSYLDSYL* 448
>TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family protein |
chr1:20804988-20807294 REVERSE
Length = 446
Score = 675 bits (1740), Expect = 3e-194
Identities = 321/441 (72%), Positives = 377/441 (85%), Gaps = 2/441 (0%)
Frame = +2
Query: 104 DFDEYMADEYDMDDLEDEMNAEFDARDIDASDSEVEDLE-QLNKAADTSAAQARNGKDIQ 280
D EYM D D D ED+++ +F D+ ASDS+V++ + NK ADTSA QAR GKDIQ
Sbjct: 7 DDAEYMEDVDDEMD-EDDLDEDFRGDDMAASDSDVDEFDYSNNKIADTSADQARKGKDIQ 65
Query: 281 GIPWDRLSVTRKDYRKTRLEQYKNYENVPHSGEEAGKHCTDTEKGSSFYTFRSNSRSVRS 460
GIPWDRLS+TR+ YR+TRLEQYKNYENVP+SGE +GK C T+KG+ FY F N+RS++S
Sbjct: 66 GIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALFYDFWRNTRSIKS 125
Query: 461 TILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGSRNEILNVKGHVAPSEKHPESLLEG 640
+ILHFQLRNLVWATSKHDVYL+S Y +SH+S+LT ++++LNV+GHV+PSEKHP SLLEG
Sbjct: 126 SILHFQLRNLVWATSKHDVYLMSQYLVSHYSTLTSGKHDVLNVQGHVSPSEKHPGSLLEG 185
Query: 641 FTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSG 820
FT+TQVSTLAV+++ LVAGGFQGELICKHLDRPGVSFCSRTTY +NAITNA++IY SG
Sbjct: 186 FTKTQVSTLAVRDKFLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAIEIYNKPSG 245
Query: 821 ALHFMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSS 1000
ALHF ASNNDCGVRDFDMERYQLV FR+ WPVNH+SLSPDGKL+ +VGD+P LLVD +
Sbjct: 246 ALHFTASNNDCGVRDFDMERYQLVNQFRFPWPVNHTSLSPDGKLLTIVGDNPESLLVDPN 305
Query: 1001 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRS 1180
G+T+ TL GHLD+SFASAWHP+G TF+TGNQDKTCR+WD R S+SVAVLRGNLGAIRS
Sbjct: 306 TGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRS 365
Query: 1181 IRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDRT 1360
IR+TSDG+Y+AMAEPADFVHVYD GY EQEIDFFGEISGISFSPDTE+LFIGVWDRT
Sbjct: 366 IRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRT 425
Query: 1361 YGSLLEYGRTRDYSYLDSLL* 1423
YGSL+EY R +YSYLDS L*
Sbjct: 426 YGSLIEYSRRHNYSYLDSFL* 446
>TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: WD-40
repeat family protein (TAIR:AT1G36070.1); Has 110 Blast hits to 110
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
28; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:29355219-29358368 FORWARD
Length = 450
Score = 516 bits (1327), Expect = 2e-146
Identities = 252/441 (57%), Positives = 322/441 (73%), Gaps = 4/441 (0%)
Frame = +2
Query: 113 EYMADEYDMDDLEDEMNAEFDA---RDIDASDSEVE-DLEQLNKAADTSAAQARNGKDIQ 280
EY+ DE+ D +DE E D D D DS+ + +L + +TSA +ARNGKDIQ
Sbjct: 10 EYLVDEFHADFDDDEPFGEVDVTSESDSDFMDSDFDFELSESKTNNETSALEARNGKDIQ 69
Query: 281 GIPWDRLSVTRKDYRKTRLEQYKNYENVPHSGEEAGKHCTDTEKGSSFYTFRSNSRSVRS 460
GIPW+ L+ TR YR+ RL YKN+E++ S EE K C EKG +FY F+ N+R V+S
Sbjct: 70 GIPWESLNYTRDRYRENRLLHYKNFESLFRSREELDKECLQVEKGKNFYDFQFNTRLVKS 129
Query: 461 TILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGSRNEILNVKGHVAPSEKHPESLLEG 640
TI HFQLRNLVWATSKHDVY ++NYS+ HWSSL E+LNV + PS K SL +
Sbjct: 130 TIAHFQLRNLVWATSKHDVYFMNNYSLMHWSSLLQRGKEVLNVAKPIVPSMKQHGSLSQS 189
Query: 641 FTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSG 820
+ Q+ST+AVK+ L+VAGGFQGELICK ++ P V+FC++ T +N ITN+VDIY SG
Sbjct: 190 VSRVQISTMAVKDDLIVAGGFQGELICKKINEPEVAFCTKLTSADNDITNSVDIYNAPSG 249
Query: 821 ALHFMASNNDCGVRDFDMERYQLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSS 1000
+L M +NNDC VR FD + L+ F + W VN+ S SPDGKLVAV+GD P LL D+
Sbjct: 250 SLRVMTANNDCTVRLFDATNFALLNRFAFHWSVNNISTSPDGKLVAVLGDSPECLLADTG 309
Query: 1001 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRS 1180
+G+ I L+GHLDYSF+SAWHPNG ATGNQD TCR+WD R S+S+ VL+GN+GAIR+
Sbjct: 310 SGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRA 369
Query: 1181 IRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEISGISFSPDTESLFIGVWDRT 1360
+RFTSDGR++AMAEPADFVH++DT+ GY + QEID FGEI+GISFSPDTE+LF+GV DRT
Sbjct: 370 LRFTSDGRFLAMAEPADFVHLFDTEAGYSQCQEIDLFGEIAGISFSPDTEALFVGVADRT 429
Query: 1361 YGSLLEYGRTRDYSYLDSLL* 1423
YGSLLE+ R R++SY+DS+ *
Sbjct: 430 YGSLLEFNRKRNHSYVDSIF* 450
>TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family protein |
chr1:13467164-13470386 REVERSE
Length = 419
Score = 485 bits (1246), Expect = 6e-137
Identities = 236/412 (57%), Positives = 305/412 (74%), Gaps = 4/412 (0%)
Frame = +2
Query: 188 DASDSEVEDLEQLNKAADTSAAQARNGKDIQGIPWDRLSVTRKDYRKTRLEQYKNYENV- 364
D SD E +D E DTSA +ARNGKDIQGI W+ R ++R+TRL+QY N+ N+
Sbjct: 6 DDSDFE-DDCETKKMETDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFVNIL 64
Query: 365 -PHSGEEAGK-HCTDTEKGSSFYTFRSNSRSVRSTILHFQLRNLVWATSKHDVYLLSNYS 538
P S E+ K H EKG +FY F+ N+R V STI+HFQLRNLVWATSKHDVYL+ NYS
Sbjct: 65 RPSSREKLDKEHGQVVEKGKNFYDFQFNTRLVTSTIVHFQLRNLVWATSKHDVYLMQNYS 124
Query: 539 ISHWSSLTGSRNEILNVKGHVAPSEKHPESLLEGFTETQVSTLAVKERLLVAGGFQGELI 718
+ HWSSL E+LNV V P++K P E + QVS++AVKE L++ GGF GEL+
Sbjct: 125 LMHWSSLLQRGKEVLNVARSVTPTQKLPGLFSEPLSRVQVSSMAVKENLILLGGFDGELL 184
Query: 719 CKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFMASNNDCGVRDFDMERYQLVQL 898
CK +++PGV+FC+R + +NAITN VDIYR+ SG+L + +NNDC +R FD + + V
Sbjct: 185 CKCVNQPGVAFCTRLSTEDNAITNTVDIYRDPSGSLRLITANNDCKIRVFDAQSFTRVSE 244
Query: 899 FRYLWPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVT 1078
F W VN++S+SPDGKL+AVVGD L+ DS +G+ I +L+GH DYSFASAWHPNG+
Sbjct: 245 FALDWSVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLI 304
Query: 1079 FATGNQDKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKT 1258
ATGNQD CR+WD R SES AVL+GN+GAIR ++FT +GR++AMAEPADFVH++DT++
Sbjct: 305 LATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQS 364
Query: 1259 GYRKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRTRDYSYLDS 1414
G+ + QEID FGEI+GISFSPDTE+L++GV DRTYGSLLEY R +D Y+DS
Sbjct: 365 GFLQSQEIDLFGEIAGISFSPDTEALYVGVADRTYGSLLEYKRRKDNHYMDS 416
>TAIR9_protein||AT3G49660.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr3:18413690-18415223 FORWARD
Length = 318
Score = 69 bits (166), Expect = 1e-011
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
++ + S D + + DD L D G I TL GH +Y+F ++P +G+
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 1097 DKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQ 1276
D+T RIWD T + + VL + + ++ F DG I + ++D+ TG+ +
Sbjct: 134 DETVRIWDV-TTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 1277 EIDFFG-EISGISFSPDTESLFIGVWDRT 1360
ID +S + FSP+ + + +G D T
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLDNT 221
>TAIR9_protein||AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5);
nucleotide binding / transcription regulator | chr5:8677117-8682058
FORWARD
Length = 670
Score = 64 bits (155), Expect = 2e-010
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +2
Query: 911 WPVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATG 1090
+PV + SP G A D + Q + + GHL WHPN ATG
Sbjct: 461 YPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATG 520
Query: 1091 NQDKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKT 1258
+ DKT R+WD +T E V + G+ + S+ + DGRY+A + + ++D T
Sbjct: 521 SSDKTVRLWDV-QTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
>TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding |
chr1:3733406-3739363 FORWARD
Length = 1022
Score = 58 bits (138), Expect = 2e-008
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Frame = +2
Query: 914 PVNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 1093
PV+ + + + LV L D + + GH A +HP G A+G+
Sbjct: 60 PVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGS 119
Query: 1094 QDKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKE 1273
D R+WDTRK + +G+ I +I F+ DGR++ + V V+D G
Sbjct: 120 SDTNLRVWDTRKKG-CIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
Query: 1274 QEIDFFGEISGISFSPDTESLFIGVWDRT 1360
+ G I + F P L G DRT
Sbjct: 179 EFKCHEGPIRSLDFHPLEFLLATGSADRT 207
>TAIR9_protein||AT2G43770.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr2:18134272-18135303 REVERSE
Length = 344
Score = 57 bits (137), Expect = 2e-008
Identities = 32/99 (32%), Positives = 47/99 (47%)
Frame = +2
Query: 965 GDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESV 1144
G PNG SS I L GH + ++P G A+G+ D+ +W ++
Sbjct: 30 GPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNF 89
Query: 1145 AVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTG 1261
VL+G+ AI + +TSDG I A P V +D +TG
Sbjct: 90 MVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETG 128
>TAIR9_protein||AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide
binding | chr2:17304319-17306855 REVERSE
Length = 555
Score = 54 bits (129), Expect = 2e-007
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Frame = +2
Query: 998 SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKTSESVAVLRGNLGAIR 1177
++G + T +GHLD A+HP+G T + DKT R+WD T + + G+ ++
Sbjct: 327 TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGAELLLQEGHSRSVY 385
Query: 1178 SIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGEIS---GISFSPDTESLFIG- 1345
I F DG A V+D +TG + F G I ++FSP+ L G
Sbjct: 386 GIAFQQDGALAASCGLDSLARVWDLRTG---RSILVFQGHIKPVFSVNFSPNGYHLASGG 442
Query: 1346 ------VWD 1354
+WD
Sbjct: 443 EDNQCRIWD 451
Score = 52 bits (123), Expect = 1e-006
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +2
Query: 941 DGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWD 1120
DG L A G D + D G++I +GH+ F+ + PNG A+G +D CRIWD
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 1121 TRKTSESVAVLRGNLGAIRSIRF-TSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFGE 1297
R +S+ ++ + + +++ +G ++A A YD K ++
Sbjct: 452 LR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATAS-------YDMKVNIWSGRDFSLVKS 503
Query: 1298 ISG 1306
++G
Sbjct: 504 LAG 506
>TAIR9_protein||AT4G02730.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr4:1207759-1209066 FORWARD
Length = 334
Score = 53 bits (126), Expect = 4e-007
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Frame = +2
Query: 935 SPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 1114
S DG L+A D +L ++N I +GH AW + + + D T RI
Sbjct: 52 SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRI 111
Query: 1115 WDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYRKEQEIDFFG 1294
WD R E + VLRG+ + + F I + + +++ KTG
Sbjct: 112 WDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSM 171
Query: 1295 EISGISFSPDTESLFIG--------VWDRTYGSLLE 1378
IS + F+ D SL + +WD G+ L+
Sbjct: 172 PISSVHFNRD-GSLIVSASHDGSCKIWDAKEGTCLK 206
>TAIR9_protein||AT5G52820.1 | Symbols: | WD-40 repeat family protein /
notchless protein, putative | chr5:21401423-21404203 FORWARD
Length = 474
Score = 51 bits (120), Expect = 2e-006
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +2
Query: 917 VNHSSLSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 1096
VNH SPDGK +A D + L + GQ + +GH+ + +W + +G++
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 1097 DKTCRIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYI 1210
D T +IW+ R T + L G+ + ++ ++ DG +
Sbjct: 423 DSTLKIWEIR-TKKLKQDLPGHADEVFAVDWSPDGEKV 459
>TAIR9_protein||AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein binding |
chr4:16477393-16478769 REVERSE
Length = 316
Score = 50 bits (118), Expect = 4e-006
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = +2
Query: 932 LSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGH-LDYSFASAWHPNGVTFATGNQDKTC 1108
++ G ++ D GL G+ GH D S N F +G+ D T
Sbjct: 111 ITSSGDQTCILWDVTTGLKTSVFGGE---FQSGHTADVLSVSISGSNPNWFISGSCDSTA 167
Query: 1109 RIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYR----KEQ 1276
R+WDTR S +V G+ G + +++F DG +YD +TG++ +
Sbjct: 168 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
Query: 1277 EIDFFGEISGISFSPDTESLFIG 1345
G ++ I+FS LF G
Sbjct: 228 GDGENGPVTSIAFSVSGRLLFAG 250
>TAIR9_protein||AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein binding |
chr4:16477586-16479266 REVERSE
Length = 348
Score = 50 bits (118), Expect = 4e-006
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = +2
Query: 932 LSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGH-LDYSFASAWHPNGVTFATGNQDKTC 1108
++ G ++ D GL G+ GH D S N F +G+ D T
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGE---FQSGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 1109 RIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYR----KEQ 1276
R+WDTR S +V G+ G + +++F DG +YD +TG++ +
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
Query: 1277 EIDFFGEISGISFSPDTESLFIG 1345
G ++ I+FS LF G
Sbjct: 290 GDGENGPVTSIAFSVSGRLLFAG 312
>TAIR9_protein||AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein binding |
chr4:16477393-16479266 REVERSE
Length = 378
Score = 50 bits (118), Expect = 4e-006
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = +2
Query: 932 LSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGH-LDYSFASAWHPNGVTFATGNQDKTC 1108
++ G ++ D GL G+ GH D S N F +G+ D T
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGE---FQSGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 1109 RIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYR----KEQ 1276
R+WDTR S +V G+ G + +++F DG +YD +TG++ +
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
Query: 1277 EIDFFGEISGISFSPDTESLFIG 1345
G ++ I+FS LF G
Sbjct: 290 GDGENGPVTSIAFSVSGRLLFAG 312
>TAIR9_protein||AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein binding |
chr4:16477393-16479266 REVERSE
Length = 373
Score = 50 bits (118), Expect = 4e-006
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = +2
Query: 932 LSPDGKLVAVVGDDPNGLLVDSSNGQTIGTLKGH-LDYSFASAWHPNGVTFATGNQDKTC 1108
++ G ++ D GL G+ GH D S N F +G+ D T
Sbjct: 168 ITSSGDQTCILWDVTTGLKTSVFGGE---FQSGHTADVLSVSISGSNPNWFISGSCDSTA 224
Query: 1109 RIWDTRKTSESVAVLRGNLGAIRSIRFTSDGRYIAMAEPADFVHVYDTKTGYR----KEQ 1276
R+WDTR S +V G+ G + +++F DG +YD +TG++ +
Sbjct: 225 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 284
Query: 1277 EIDFFGEISGISFSPDTESLFIG 1345
G ++ I+FS LF G
Sbjct: 285 GDGENGPVTSIAFSVSGRLLFAG 307
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,260,137,217
Number of Sequences: 33410
Number of Extensions: 11260137217
Number of Successful Extensions: 370265783
Number of sequences better than 0.0: 0
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