Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN21607


BLASTX 7.6.2

Query= UN21607 /QuerySize=554
        (553 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G13615.1 | Symbols:  | four F5 protein-related...    121   3e-028
TAIR9_protein||AT3G24100.1 | Symbols:  | FUNCTIONS IN: molecular...    115   2e-026

>TAIR9_protein||AT4G13615.1 | Symbols:  | four F5 protein-related / 4F5
        protein-related | chr4:7924353-7925017 FORWARD

          Length = 72

 Score =  121 bits (303), Expect = 3e-028
 Identities = 63/71 (88%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
 Frame = +3

Query: 126 MTRGSQRERDRERAAARAGGKGKSADDGLTPEQRRERDGKALQEKAAKKAAQAAAAAGSG 305
           MTRGSQRERDRERAAARAGGKGK+ DDGLTPEQRRERDGKALQEKAAKKAAQAA A+ SG
Sbjct:   1 MTRGSQRERDRERAAARAGGKGKNGDDGLTPEQRRERDGKALQEKAAKKAAQAAGAS-SG 59

Query: 306 GGAGGKGTAKK 338
           G AGGKG A K
Sbjct:  60 GAAGGKGAAAK 70

>TAIR9_protein||AT3G24100.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; EXPRESSED IN: male gametophyte, pollen
        tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen
        stage; CONTAINS InterPro DOMAIN/s: Four F5 protein
        (InterPro:IPR007513); BEST Arabidopsis thaliana protein match is: four
        F5 protein-related / 4F5 protein-related (TAIR:AT4G13615.1); Has 195
        Blast hits to 195 proteins in 53 species: Archae - 0; Bacteria - 0;
        Metazoa - 136; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes -
        4 (source: NCBI BLink). | chr3:8703373-8704045 FORWARD

          Length = 70

 Score =  115 bits (287), Expect = 2e-026
 Identities = 60/70 (85%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
 Frame = +3

Query: 126 MTRGSQRERDRERAAARAGGKGKSADDGLTPEQRRERDGKALQEKAAKKAAQAAAAAGSG 305
           MTRGSQRERDRERA AR GGKGK+ DDGLTPEQRRERD KALQEK AKKAAQAAAAA SG
Sbjct:   1 MTRGSQRERDRERALARTGGKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAAAAASSG 60

Query: 306 GGAGGKGTAK 335
           GG GGKG  K
Sbjct:  61 GG-GGKGNNK 69

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,260,137,217
Number of Sequences: 33410
Number of Extensions: 11260137217
Number of Successful Extensions: 370265783
Number of sequences better than 0.0: 0