Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN21622


BLASTX 7.6.2

Query= UN21622 /QuerySize=808
        (807 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|15227712|ref|NP_178477.1| uncharacterized protein [Arabidopsi...    159   7e-037
gi|297814694|ref|XP_002875230.1| hypothetical protein ARALYDRAFT...    152   9e-035

>gi|15227712|ref|NP_178477.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 123

 Score =  159 bits (400), Expect = 7e-037
 Identities = 89/122 (72%), Positives = 101/122 (82%), Gaps = 4/122 (3%)
 Frame = +1

Query:  88 MKLIRVSCLLCVLAFLLFITPTSSLQLHTSYSSPSQGISEKIVIKMAPRKLMIISSEHEN 267
           MKLIRV+  LC LA LL +TPTSSLQL   YSSPSQG+S+KIV KMA RKLMIISSE+  
Sbjct:   1 MKLIRVTLFLCALAILLLVTPTSSLQLKHPYSSPSQGLSKKIVTKMATRKLMIISSEY-- 58

Query: 268 VMKSGTHEGSSQQPRVTSSSGKSMDEKKRLGDEEEE-KALSKYLSMDYPRFRRRRPVHNK 444
           VM S +HEGSS+Q RVT SSGKS DE+K+L +EEEE KAL+KYLSMDY  FRRRRPVHNK
Sbjct:  59 VMTSTSHEGSSEQLRVT-SSGKSKDEEKKLSEEEEEKKALAKYLSMDYRTFRRRRPVHNK 117

Query: 445 SL 450
           +L
Sbjct: 118 AL 119

>gi|297814694|ref|XP_002875230.1| hypothetical protein ARALYDRAFT_484294
        [Arabidopsis lyrata subsp. lyrata]

          Length = 123

 Score =  152 bits (382), Expect = 9e-035
 Identities = 85/122 (69%), Positives = 97/122 (79%), Gaps = 4/122 (3%)
 Frame = +1

Query:  88 MKLIRVSCLLCVLAFLLFITPTSSLQLHTSYSSPSQGISEKIVIKMAPRKLMIISSEHEN 267
           MKL+RV   LC LA +L +TPTSSLQL   YSSPSQG+S+KIV KM  RKLMIISSEH  
Sbjct:   1 MKLVRVIFFLCALAIVLLLTPTSSLQLKPPYSSPSQGLSKKIVTKMVTRKLMIISSEH-- 58

Query: 268 VMKSGTHEGSSQQPRVTSSSGKSMDEKKRLGDEEEE-KALSKYLSMDYPRFRRRRPVHNK 444
           VM S  HEGSS+Q +VT SSG+S  E+K+L +EEEE KALSKYLSMDY  FRRRRPVHNK
Sbjct:  59 VMTSTVHEGSSEQLQVT-SSGRSKGEEKKLSEEEEEKKALSKYLSMDYRTFRRRRPVHNK 117

Query: 445 SL 450
           +L
Sbjct: 118 AL 119

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,584,745,891,651
Number of Sequences: 15229318
Number of Extensions: 2584745891651
Number of Successful Extensions: 639272726
Number of sequences better than 0.0: 0