BLASTX 7.6.2
Query= UN21718 /QuerySize=794
(793 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S... 333 8e-092
TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S... 327 5e-090
TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S... 295 3e-080
TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S... 216 1e-056
TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S... 211 6e-055
TAIR9_protein||AT1G29380.1 | Symbols: | FUNCTIONS IN: molecular... 48 7e-006
>TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 178
Score = 333 bits (853), Expect = 8e-092
Identities = 164/183 (89%), Positives = 169/183 (92%), Gaps = 6/183 (3%)
Frame = +3
Query: 90 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 269
MII+E NRREICKYLFKEGV FAKKDFNLPKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 270 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG-PRFEGD 446
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RG PR +GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGD 119
Query: 447 RPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGGGGGRPGFGRGAGGYNAAAPSGSG 626
RPRFGDRDGYR GPRGGD EKGGAPAD+QPSFQ GGGGRPGFGRGAGGY+AAAPSGSG
Sbjct: 120 RPRFGDRDGYRGGPRGGD---EKGGAPADFQPSFQ-GGGGRPGFGRGAGGYSAAAPSGSG 175
Query: 627 LP* 635
P*
Sbjct: 176 FP* 178
>TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S10 (RPS10C) |
chr5:21355781-21357003 REVERSE
Length = 180
Score = 327 bits (838), Expect = 5e-090
Identities = 163/184 (88%), Positives = 168/184 (91%), Gaps = 6/184 (3%)
Frame = +3
Query: 90 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 269
MII+E NR+EICKYLFKEGV FAKKDFNL KHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 270 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPRFE-GD 446
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RGPR E GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGD 119
Query: 447 RPRFGDRDGYRAGPR-GGDAGGEKGGAPADYQPSFQGGGGGRPGFGRGAGGYNAAAPSGS 623
RPRFGDRDGYRAGPR GG+ GGEKGGAPADYQPSFQG G GFGRGAGGY+AAAPSGS
Sbjct: 120 RPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSG---RGFGRGAGGYSAAAPSGS 176
Query: 624 GLP* 635
GLP*
Sbjct: 177 GLP* 180
>TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610583 REVERSE
Length = 181
Score = 295 bits (754), Expect = 3e-080
Identities = 147/184 (79%), Positives = 160/184 (86%), Gaps = 5/184 (2%)
Frame = +3
Query: 90 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 269
MII+ETNRREI KYLFKEGVLFAKKDFNLP+HPLIESVPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 270 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG-PRFEGD 446
AWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG GDRPRG PR +G+
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGDGE 119
Query: 447 RPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGG-GGGRPGFGRGAGGYNAAAPSGS 623
R RFGDRDGYR GP+ G G+K GAPADYQP F+GG GG R GFGRGAGG+ A +GS
Sbjct: 120 R-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-AGS 177
Query: 624 GLP* 635
LP*
Sbjct: 178 DLP* 181
>TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 150
Score = 216 bits (550), Expect = 1e-056
Identities = 113/150 (75%), Positives = 119/150 (79%), Gaps = 9/150 (6%)
Frame = +3
Query: 90 MIITETNRREICKYLFKEGVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 269
MII+E NRREICKYLFKEGV FAKKDFNLPKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 270 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPRFEGDR 449
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGP G +G +
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRGGDEKGGAPADFQ 119
Query: 450 PRF---GDRDGYRAGPRGGDAGGEKGGAPA 530
P F G R G+ G AGG AP+
Sbjct: 120 PSFQGGGGRPGF-----GRGAGGYSAAAPS 144
Score = 89 bits (219), Expect = 3e-018
Identities = 43/51 (84%), Positives = 45/51 (88%), Gaps = 4/51 (7%)
Frame = +3
Query: 483 GPRGGDAGGEKGGAPADYQPSFQGGGGGRPGFGRGAGGYNAAAPSGSGLP* 635
GPRGGD EKGGAPAD+QPSFQ GGGGRPGFGRGAGGY+AAAPSGSG P*
Sbjct: 104 GPRGGD---EKGGAPADFQPSFQ-GGGGRPGFGRGAGGYSAAAPSGSGFP* 150
>TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610203 REVERSE
Length = 135
Score = 211 bits (535), Expect = 6e-055
Identities = 104/138 (75%), Positives = 115/138 (83%), Gaps = 5/138 (3%)
Frame = +3
Query: 228 MQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGP 407
MQSFKSKEYVRETFAWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG
Sbjct: 1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 59
Query: 408 PGDRPRG-PRFEGDRPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGG-GGGRPGFG 581
GDRPRG PR +G+R RFGDRDGYR GP+ G G+K GAPADYQP F+GG GG R GFG
Sbjct: 60 GGDRPRGPPRGDGER-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFG 118
Query: 582 RGAGGYNAAAPSGSGLP* 635
RGAGG+ A +GS LP*
Sbjct: 119 RGAGGFGGGA-AGSDLP* 135
>TAIR9_protein||AT1G29380.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: X8
(InterPro:IPR012946); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G30933.2); Has 72661 Blast hits to 25630
proteins in 1396 species: Archae - 121; Bacteria - 23698; Metazoa -
22516; Fungi - 4473; Plants - 9059; Viruses - 967; Other Eukaryotes -
11827 (source: NCBI BLink). | chr1:10284209-10285671 FORWARD
Length = 316
Score = 48 bits (112), Expect = 7e-006
Identities = 29/82 (35%), Positives = 32/82 (39%)
Frame = +3
Query: 381 PIGRPFGGPPGDRPRGPRFEGDRPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQGGG 560
P F GP P +G P G Y P GG G GG P GGG
Sbjct: 59 PPSLTFPGPTTPTGGYPPLDGTTPTGGYPPLYGTTPPGGGDVGGGGGGYGGGTPGGGGGG 118
Query: 561 GGRPGFGRGAGGYNAAAPSGSG 626
GG G G G GGY +G+G
Sbjct: 119 GGDTGAGAGGGGYGGGGDTGAG 140
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,303,094,278
Number of Sequences: 33410
Number of Extensions: 11303094278
Number of Successful Extensions: 370280146
Number of sequences better than 0.0: 0
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