BLASTX 7.6.2
Query= UN21721 /QuerySize=698
(697 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=G... 63 2e-009
sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus... 59 4e-008
sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN... 57 8e-008
sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN... 57 8e-008
>sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=GORAB PE=2 SV=2
Length = 370
Score = 63 bits (151), Expect = 2e-009
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Frame = +1
Query: 13 QERIMSIKNSGGAAAAAAVNNTNGKLPMEEKD---EEEEIWKVAVSRFQAREEEIERKKM 183
Q++ + +KNS A V +E+K +E+ W+V + EE+ +RKK
Sbjct: 103 QQKELGLKNSHEVHKNAEVLPLKADCQLEKKKVELQEKSRWEVLQQEQRLMEEKNKRKKA 162
Query: 184 TVKEKVQQRLGFAEEATRCLTQTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQ 363
+ + + +R + T L + +EL+ + D + ++G++R +ID A+ D +
Sbjct: 163 LLAKAIAERSKRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQASLDYSYARKRFD 222
Query: 364 KKEKEYKETLEAFNEKNKEKTHLVSMLMELLAESERVRMKKLEEI 498
+ E EY K + K L L ++ ++E + KKLEE+
Sbjct: 223 RAEAEYVTAKLELQRKTELKEQLTEHLCTIIQQNELRKAKKLEEL 267
>sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus GN=Gorab PE=2
SV=2
Length = 368
Score = 59 bits (140), Expect = 4e-008
Identities = 36/159 (22%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Frame = +1
Query: 31 IKNSGGAAAAAAVNNTNGKLPMEEKD---EEEEIWKVAVSRFQAREEEIERKKMTVKEKV 201
++NS + +A + +E+K +E+ W+V + EE+ +RKK + + +
Sbjct: 112 LENSHHGSRSAEIQTPKPDCKVEKKKMELQEKSRWEVLQQEQRLMEEKNKRKKALLAQAI 171
Query: 202 QQRLGFAEEATRCLTQTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEY 381
+R + T L + +EL+ + D + ++G++R +ID A+ + + + E EY
Sbjct: 172 AERSRRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQASLEYSYARKRFDRAEAEY 231
Query: 382 KETLEAFNEKNKEKTHLVSMLMELLAESERVRMKKLEEI 498
K + K L L ++ ++E + +KLEE+
Sbjct: 232 VTAKLDLQRKTETKEQLTEHLCTIIQQNELRKAQKLEEL 270
>sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN=GORAB PE=1
SV=1
Length = 394
Score = 57 bits (137), Expect = 8e-008
Identities = 33/130 (25%), Positives = 64/130 (49%)
Frame = +1
Query: 109 EEEEIWKVAVSRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLTQTLEELEIMGDPMR 288
+E+ W+V + EE+ +RKK + + + +R + T L + +EL+ + D +
Sbjct: 166 QEKSRWEVLQQEQRLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQALDDMVS 225
Query: 289 KEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKETLEAFNEKNKEKTHLVSMLMELLAESE 468
++G++R +ID A+ D + + E EY K + K L L ++ ++E
Sbjct: 226 ADIGILRNRIDQASLDYSYARKRFDRAEAEYIAAKLDIQRKTEIKEQLTEHLCTIIQQNE 285
Query: 469 RVRMKKLEEI 498
+ KKLEE+
Sbjct: 286 LRKAKKLEEL 295
>sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN=Gorab PE=1
SV=1
Length = 368
Score = 57 bits (137), Expect = 8e-008
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Frame = +1
Query: 31 IKNSGGAAAAAAVNNTNGKLPMEEKD---EEEEIWKVAVSRFQAREEEIERKKMTVKEKV 201
++NS +A V +E+K +E+ W+V + EE+ +RKK + + +
Sbjct: 112 LENSHHGHKSAEVRAPKPDCKVEKKKMELQEKSRWEVLQQEQRLMEEKNKRKKALLAQAI 171
Query: 202 QQRLGFAEEATRCLTQTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEY 381
+R + T L + +EL+ + D + ++G++R +ID A+ + + + E EY
Sbjct: 172 AERSKKTQAETIKLKRIQKELQALDDMVSADIGILRNRIDQASLEYSYARKRFDRAEAEY 231
Query: 382 KETLEAFNEKNKEKTHLVSMLMELLAESERVRMKKLEEI 498
K + K L L ++ ++E + KKLEE+
Sbjct: 232 ITAKLDLQRKTETKEQLTEHLCTIIQQNELRKAKKLEEL 270
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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