BLASTX 7.6.2
Query= UN21749 /QuerySize=1158
(1157 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297832814|ref|XP_002884289.1| nucleic acid binding protein [A... 426 3e-117
gi|79386568|ref|NP_186770.3| RNA recognition motif-containing pr... 426 6e-117
gi|26452178|dbj|BAC43177.1| unknown protein [Arabidopsis thaliana] 316 5e-084
gi|255642056|gb|ACU21294.1| unknown [Glycine max] 270 5e-070
gi|124359235|gb|ABD32221.2| RNA-binding region RNP-1 (RNA recogn... 260 4e-067
gi|224140969|ref|XP_002323849.1| predicted protein [Populus tric... 258 1e-066
gi|296082886|emb|CBI22187.3| unnamed protein product [Vitis vini... 218 2e-054
gi|224140971|ref|XP_002323850.1| predicted protein [Populus tric... 188 3e-045
gi|147791771|emb|CAN61841.1| hypothetical protein VITISV_036652 ... 187 4e-045
gi|225452761|ref|XP_002283067.1| PREDICTED: hypothetical protein... 186 6e-045
gi|48209876|gb|AAT40482.1| hypothetical protein [Solanum demissum] 186 1e-044
gi|225425748|ref|XP_002276614.1| PREDICTED: hypothetical protein... 181 2e-043
gi|217073640|gb|ACJ85180.1| unknown [Medicago truncatula] 177 3e-042
gi|255552904|ref|XP_002517495.1| nucleic acid binding protein, p... 176 6e-042
gi|255558164|ref|XP_002520109.1| nucleic acid binding protein, p... 176 8e-042
gi|326509163|dbj|BAJ86974.1| predicted protein [Hordeum vulgare ... 169 1e-039
gi|297844338|ref|XP_002890050.1| hypothetical protein ARALYDRAFT... 163 7e-038
gi|7262676|gb|AAF43934.1|AC012188_11 Contains similarity to Vip1... 160 4e-037
gi|18394102|ref|NP_563946.1| RNA recognition motif-containing pr... 160 4e-037
gi|21618045|gb|AAM67095.1| unknown [Arabidopsis thaliana] 158 2e-036
>gi|297832814|ref|XP_002884289.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 249
Score = 426 bits (1095), Expect = 3e-117
Identities = 219/249 (87%), Positives = 233/249 (93%), Gaps = 3/249 (1%)
Frame = +3
Query: 192 YPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMA 371
YPCGYVA+VTNLSP+ATE+DVH FFSHCGIVELVEITGC G DALTAYVTFRDAYALDMA
Sbjct: 2 YPCGYVAQVTNLSPQATERDVHRFFSHCGIVELVEITGCEG-DALTAYVTFRDAYALDMA 60
Query: 372 LLLNGATIVDQTVWISMYGVYLHESNNLTREGDYTVTVTQSHADTFASSPGEAVTIAQQV 551
+LL+GATIVDQTVWIS+YGVYLHESNNL +E DYTVT T+S D FASSPGEAVT+AQQV
Sbjct: 61 VLLSGATIVDQTVWISVYGVYLHESNNLRQEEDYTVTATRS--DAFASSPGEAVTVAQQV 118
Query: 552 VKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSAD 731
VKT+++KGYVLSKDA GKAKALDESQRFSS VA KLAEI YIGLTQNIQSSME VRSAD
Sbjct: 119 VKTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYIGLTQNIQSSMEVVRSAD 178
Query: 732 DKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSDALGRAAK 911
+KYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAAT+VVNSRYFANGALWFSDALGRAAK
Sbjct: 179 EKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAK 238
Query: 912 AAAHMGGGG 938
AAAHM GGG
Sbjct: 239 AAAHMAGGG 247
>gi|79386568|ref|NP_186770.3| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 249
Score = 426 bits (1093), Expect = 6e-117
Identities = 217/251 (86%), Positives = 236/251 (94%), Gaps = 3/251 (1%)
Frame = +3
Query: 192 YPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMA 371
YPCGYVA+VTNLSP+ATEKDVH FFSHCGIVELVEITGC G DALTAYVTFRDAYALDMA
Sbjct: 2 YPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQG-DALTAYVTFRDAYALDMA 60
Query: 372 LLLNGATIVDQTVWISMYGVYLHESNNLTREGDYTVTVTQSHADTFASSPGEAVTIAQQV 551
+LL+GATIVDQTVWIS+YGVYLHESNNL +E DY+VTVT+S D FASSPGEA+T+AQQV
Sbjct: 61 VLLSGATIVDQTVWISVYGVYLHESNNLRQEEDYSVTVTRS--DAFASSPGEAITVAQQV 118
Query: 552 VKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSAD 731
V+T+++KGYVLSKDA GKAKALDESQRFSS VA KLAEI Y+GLTQNIQSSME VRSAD
Sbjct: 119 VQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVRSAD 178
Query: 732 DKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSDALGRAAK 911
+KYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAAT+VVNSRYFANGALWFSDALGRAAK
Sbjct: 179 EKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAK 238
Query: 912 AAAHMGGGGGS 944
AAAH+GGGG +
Sbjct: 239 AAAHIGGGGSN 249
>gi|26452178|dbj|BAC43177.1| unknown protein [Arabidopsis thaliana]
Length = 191
Score = 316 bits (809), Expect = 5e-084
Identities = 162/191 (84%), Positives = 179/191 (93%), Gaps = 2/191 (1%)
Frame = +3
Query: 372 LLLNGATIVDQTVWISMYGVYLHESNNLTREGDYTVTVTQSHADTFASSPGEAVTIAQQV 551
+LL+GATIVDQTVWIS+YGVYLHESNNL +E DY+VTVT+S D FASSPGEA+T+AQQV
Sbjct: 3 VLLSGATIVDQTVWISVYGVYLHESNNLRQEEDYSVTVTRS--DAFASSPGEAITVAQQV 60
Query: 552 VKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSAD 731
V+T+++KGYVLSKDA GKAKALDESQRFSS VA KLAEI Y+GLTQNIQSSME VRSAD
Sbjct: 61 VQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVRSAD 120
Query: 732 DKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSDALGRAAK 911
+KYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAAT+VVNSRYFANGALWFSDALGRAAK
Sbjct: 121 EKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAK 180
Query: 912 AAAHMGGGGGS 944
AAAH+GGGG +
Sbjct: 181 AAAHIGGGGSN 191
>gi|255642056|gb|ACU21294.1| unknown [Glycine max]
Length = 258
Score = 270 bits (688), Expect = 5e-070
Identities = 139/251 (55%), Positives = 179/251 (71%), Gaps = 5/251 (1%)
Frame = +3
Query: 189 MYPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDM 368
M+ GY A VTNLSPRATE DV +FF++CG++E +EI G N A TAYVT+RDAY L+
Sbjct: 4 MHSGGYTALVTNLSPRATEDDVRNFFTYCGLIEHIEILRSGEN-APTAYVTYRDAYTLET 62
Query: 369 ALLLNGATIVDQTVWISMYGVYLHESNNLTREG---DYTVTVTQS-HADTFASSPGEAVT 536
ALLLNG+ I+DQ ++IS Y Y+++ +N + +Y++T +Q H D F +SPGEA+T
Sbjct: 63 ALLLNGSMILDQCIFISRYEAYVNDYDNWSNHASNPEYSITTSQDVHMDKFVASPGEALT 122
Query: 537 IAQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEA 716
+AQ VVKT+++KGYVL KDAF AKA DES SS+ A K+AE+ IGLT I S +E
Sbjct: 123 MAQVVVKTMVAKGYVLGKDAFVMAKAFDESHSVSSTAATKVAELSNKIGLTDTINSGIET 182
Query: 717 VRSADDKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSDAL 896
+S D+KYH +DFTKSA VTGT A+ A++TGK A AA T + NS YFA G LW SD L
Sbjct: 183 FKSVDEKYHVTDFTKSATTVTGTTAIVVASVTGKAAVAAGTAIANSSYFAKGTLWVSDVL 242
Query: 897 GRAAKAAAHMG 929
RAAKAAA +G
Sbjct: 243 TRAAKAAADLG 253
>gi|124359235|gb|ABD32221.2| RNA-binding region RNP-1 (RNA recognition motif)
[Medicago truncatula]
Length = 271
Score = 260 bits (663), Expect = 4e-067
Identities = 132/238 (55%), Positives = 173/238 (72%), Gaps = 5/238 (2%)
Frame = +3
Query: 189 MYPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDM 368
MYP GY AE+TNL+PRATE DV +FF +CG++E V++ ++ TAYVTFRDAYAL+
Sbjct: 1 MYPGGYTAEITNLTPRATENDVQNFFGYCGVIERVDVIRSSDYES-TAYVTFRDAYALET 59
Query: 369 ALLLNGATIVDQTVWISMYGVYLHES---NNLTREGDYTVTVTQS-HADTFASSPGEAVT 536
ALLLNG+ I+D+ + IS + Y +S NNLT + ++T +Q H D F SSPGEA+T
Sbjct: 60 ALLLNGSMILDRCISISRWETYTDDSNNWNNLTPNHEDSITYSQDMHMDKFVSSPGEALT 119
Query: 537 IAQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEA 716
+AQQVVKT+++KG+VLSKDAF AKA DES+ SS+ ANK+AE+ IGLT+ I S +E
Sbjct: 120 MAQQVVKTMVAKGFVLSKDAFVMAKAFDESRSVSSTAANKVAELSNKIGLTETINSGIET 179
Query: 717 VRSADDKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSD 890
+S D+KYH +D TKSA VTGT A+ AT+TG+ A AA + + NS YFA GALW SD
Sbjct: 180 FKSVDEKYHVTDITKSAATVTGTTAIVVATVTGRAAMAAGSAIANSSYFAKGALWVSD 237
>gi|224140969|ref|XP_002323849.1| predicted protein [Populus trichocarpa]
Length = 248
Score = 258 bits (659), Expect = 1e-066
Identities = 141/251 (56%), Positives = 175/251 (69%), Gaps = 7/251 (2%)
Frame = +3
Query: 189 MYPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDM 368
MYP GY AEVT+LSP+A EKDV+ FFSHCG +E VEI G A TAYVTF+DAY L
Sbjct: 1 MYPGGYTAEVTSLSPKAEEKDVYEFFSHCGAIEHVEIIR-SGEHACTAYVTFKDAYGLQT 59
Query: 369 ALLLNGATIVDQTVWISMYGVYLHE----SNNLTREGDYTVTVTQSHADTFASSPGEAVT 536
A+LL+ TIVDQ V I+ +G ++ E ++ EG+ + V F S+PGEAVT
Sbjct: 60 AILLSATTIVDQRVCITHWGTFVDEFDAWGSSSKDEGNTSSAVIS--LLVFVSTPGEAVT 117
Query: 537 IAQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEA 716
+AQ+VVKT++SKGY+L KDA KAKA DES + ++ A K++E+ IGLT I + ME
Sbjct: 118 VAQEVVKTMLSKGYILGKDAMVKAKAFDESHQVLATAAAKVSELSNRIGLTDKIYAGMET 177
Query: 717 VRSADDKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSDAL 896
V+ D+KYH S+FTKSA VTGTAAV+AAT TGK A AAA VVNS YFA GALW S L
Sbjct: 178 VKCVDEKYHVSEFTKSAASVTGTAAVSAATFTGKTAVAAANAVVNSTYFAKGALWVSGVL 237
Query: 897 GRAAKAAAHMG 929
+AA+AAA MG
Sbjct: 238 TQAAEAAADMG 248
>gi|296082886|emb|CBI22187.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 218 bits (554), Expect = 2e-054
Identities = 125/236 (52%), Positives = 158/236 (66%), Gaps = 20/236 (8%)
Frame = +3
Query: 210 AEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLLNGA 389
AEVT LSP+ATEKDV+ FF HCG++E +EI G A TAYVTFRD YAL+ A+LL+GA
Sbjct: 8 AEVTCLSPKATEKDVYDFFIHCGMIEHLEIIR-SGECARTAYVTFRDFYALETAVLLSGA 66
Query: 390 TIVDQTVWISMYGVYLHESNNLTREG-DYTVTVTQSHADTFASSPGEAVTIAQQVVKTLI 566
TIVDQ V IS +G+Y ES+ + +Y + ++ A++P EAVT+AQ+VV T+I
Sbjct: 67 TIVDQRVCISGWGIYADESDPWSNSSWNYEI-------NSMATTPREAVTVAQEVVTTMI 119
Query: 567 SKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADDKYHF 746
+KGYVL KDA KAKA DE+ S++ A K+AE+ + IGLT I + +EAVRS D+KYH
Sbjct: 120 AKGYVLGKDALIKAKAFDEAHGVSAAAAAKIAELSKRIGLTDKIYAGVEAVRSVDEKYHL 179
Query: 747 SDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYFANGALWFSDALGRAAKA 914
+FTKS AA +TGK AAA VNS YFA GALW S L RAA A
Sbjct: 180 LEFTKS-----------AAVVTGKTTVAAANAFVNSSYFAKGALWVSGILTRAANA 224
>gi|224140971|ref|XP_002323850.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 188 bits (475), Expect = 3e-045
Identities = 102/197 (51%), Positives = 133/197 (67%), Gaps = 7/197 (3%)
Frame = +3
Query: 189 MYPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDM 368
MYP GY AEVT+LSP+A EKDV+ FFSHCG +E VEI G A TAYVTF+DAY L
Sbjct: 1 MYPGGYTAEVTSLSPKAEEKDVYEFFSHCGAIEHVEIIR-SGEYACTAYVTFKDAYGLQT 59
Query: 369 ALLLNGATIVDQTVWISMYGVYLHE----SNNLTREGDYTVTVTQSHADTFASSPGEAVT 536
A+LL+ TIVDQ V I+ +G ++ E ++ EG+ + F S+PGEAVT
Sbjct: 60 AILLSATTIVDQRVCITHWGTFVDEFDAWGSSSMDEGN--TSSAGIPFGQFVSTPGEAVT 117
Query: 537 IAQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEA 716
+AQ+VVKT++SKGY+L KDA KAKA DES + ++ A K++E+ IGL I + ME
Sbjct: 118 VAQEVVKTMLSKGYILGKDAMVKAKAFDESHQVLATAAAKMSELSNRIGLADKIFAGMET 177
Query: 717 VRSADDKYHFSDFTKSA 767
V+ D+KYH S+FTKSA
Sbjct: 178 VKGVDEKYHVSEFTKSA 194
>gi|147791771|emb|CAN61841.1| hypothetical protein VITISV_036652 [Vitis
vinifera]
Length = 262
Score = 187 bits (473), Expect = 4e-045
Identities = 110/239 (46%), Positives = 149/239 (62%), Gaps = 17/239 (7%)
Frame = +3
Query: 210 AEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLLNGA 389
AEVT LSP+ATEKDV+ FF HCG++E +EI G A TAYVTFRD YAL+ A+LL+GA
Sbjct: 8 AEVTCLSPKATEKDVYDFFIHCGMIEHLEIIR-SGECARTAYVTFRDFYALETAVLLSGA 66
Query: 390 TIVDQTVWISMYGVYLHESNNLTREGDYTVTVTQSHADTFASSPGEAVTIAQQVVKTLIS 569
TIVDQ V IS +G+Y ES+ ++ + +++ A++P EAVT+AQ+VV T+I+
Sbjct: 67 TIVDQRVCISGWGIYADESD------PWSNSSWNYESNSMATTPREAVTVAQEVVTTMIA 120
Query: 570 KGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADDKYHFS 749
KGYVL KDA KAKA DE+ S++ A K+AE+ + IGLT I + +EAVRS D+KYH S
Sbjct: 121 KGYVLGKDALIKAKAFDEAHGVSAAAAAKIAELSKRIGLTDKIYAGVEAVRSVDEKYHVS 180
Query: 750 DFTKSAVLVTGTAAVAAATITGK----------VAAAAATTVVNSRYFANGALWFSDAL 896
+F+KSA AA + + TTV + F N + + AL
Sbjct: 181 EFSKSAANKIYGGVEAARAVEDRYQLLEFTKSAAVVTGKTTVAAANAFVNSSYFAKGAL 239
>gi|225452761|ref|XP_002283067.1| PREDICTED: hypothetical protein isoform 2
[Vitis vinifera]
Length = 262
Score = 186 bits (472), Expect = 6e-045
Identities = 111/240 (46%), Positives = 149/240 (62%), Gaps = 19/240 (7%)
Frame = +3
Query: 210 AEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLLNGA 389
AEVT LSP+ATEKDV+ FF HCG++E +EI G A TAYVTFRD YAL+ A+LL+GA
Sbjct: 8 AEVTCLSPKATEKDVYDFFIHCGMIEHLEIIR-SGECARTAYVTFRDFYALETAVLLSGA 66
Query: 390 TIVDQTVWISMYGVYLHESNNLTREG-DYTVTVTQSHADTFASSPGEAVTIAQQVVKTLI 566
TIVDQ V IS +G+Y ES+ + +Y + ++ A++P EAVT+AQ+VV T+I
Sbjct: 67 TIVDQRVCISGWGIYADESDPWSNSSWNYEI-------NSMATTPREAVTVAQEVVTTMI 119
Query: 567 SKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADDKYHF 746
+KGYVL KDA KAKA DE+ S++ A K+AE+ + IGLT I + +EAVRS D+KYH
Sbjct: 120 AKGYVLGKDALIKAKAFDEAHGVSAAAAAKIAELSKRIGLTDKIYAGVEAVRSVDEKYHV 179
Query: 747 SDFTKSAVLVTGTAAVAAATITGK----------VAAAAATTVVNSRYFANGALWFSDAL 896
S+F+KSA AA + + TTV + F N + + AL
Sbjct: 180 SEFSKSAANKIYGGVEAARAVEDRYQLLEFTKSAAVVTGKTTVAAANAFVNSSYFAKGAL 239
>gi|48209876|gb|AAT40482.1| hypothetical protein [Solanum demissum]
Length = 244
Score = 186 bits (470), Expect = 1e-044
Identities = 104/209 (49%), Positives = 133/209 (63%), Gaps = 4/209 (1%)
Frame = +3
Query: 189 MYPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDM 368
M P GY AEVT LSP ATEKDV FF CG +E VEI G A TAYVTFR+ +AL+
Sbjct: 1 MNPGGYTAEVTGLSPAATEKDVQEFFGFCGAIEHVEIVR-AGEHASTAYVTFRNPHALET 59
Query: 369 ALLLNGATIVDQTVWISMYGVYLHES---NNLTREGDYTVTVTQSHADTFASSPGEAVTI 539
A+LL+GA I+DQ V I+ +G Y E N+ + + + S F SS GEAVT+
Sbjct: 60 AVLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCHSSDSQGHYFVSSAGEAVTL 119
Query: 540 AQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAV 719
Q VVKT++S+GYVL K A GKAKA DES S++ +K+A++ IGLT + +E
Sbjct: 120 TQDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVA 179
Query: 720 RSADDKYHFSDFTKSAVLVTGTAAVAAAT 806
RS D +YH SD T+SAV TG A++AAT
Sbjct: 180 RSVDQRYHISDTTRSAVSATGRTAISAAT 208
>gi|225425748|ref|XP_002276614.1| PREDICTED: hypothetical protein isoform 1
[Vitis vinifera]
Length = 246
Score = 181 bits (459), Expect = 2e-043
Identities = 104/210 (49%), Positives = 137/210 (65%), Gaps = 4/210 (1%)
Frame = +3
Query: 189 MYPCGYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDM 368
M G+ EVT+LSP+ TEKDV+ FF+ G +E VE+ A TAYVTF+DAYA++
Sbjct: 1 MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60
Query: 369 ALLLNGATIVDQTVWISMYGVYLHESNNLTREGDYTVTVTQS-HA-DTFASSP--GEAVT 536
A+LL+GATIVDQ V I+ +G Y E + R T S HA +T S P GEAVT
Sbjct: 61 AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120
Query: 537 IAQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEA 716
+AQ+VVKT+++KGY+L KDA KAK DES +FS++ +AE+ + IGLT + +EA
Sbjct: 121 MAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVEA 180
Query: 717 VRSADDKYHFSDFTKSAVLVTGTAAVAAAT 806
+S D +YH S+ TKSAV TG A AAAT
Sbjct: 181 AKSVDQRYHISEITKSAVSATGRTAAAAAT 210
>gi|217073640|gb|ACJ85180.1| unknown [Medicago truncatula]
Length = 249
Score = 177 bits (448), Expect = 3e-042
Identities = 98/207 (47%), Positives = 130/207 (62%), Gaps = 7/207 (3%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
GY EVT LSP+AT+KDV+ FF+ G ++ VEI G+ A TAYVTF+DAY+ D A LL
Sbjct: 7 GYAVEVTGLSPQATDKDVYEFFAFSGAIQHVEIIR-SGDYACTAYVTFKDAYSQDTACLL 65
Query: 381 NGATIVDQTVWISMYGVY------LHESNNLTREGDYTVTVTQSHADTFASSPGEAVTIA 542
+GATI+DQ V I+ +G Y S + E YT H+ F SS GEAV +
Sbjct: 66 SGATILDQRVCITRWGQYEEHDFWSRPSYSHEEENSYTTQHQTQHSSQFVSSAGEAVAMT 125
Query: 543 QQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVR 722
Q+VVKT+++KGYVLSKDA KAK DES R S++ K++E+ + IGLT + + +AV+
Sbjct: 126 QEVVKTMLAKGYVLSKDALSKAKDFDESHRVSATATAKVSELSQKIGLTDKLSAGYDAVK 185
Query: 723 SADDKYHFSDFTKSAVLVTGTAAVAAA 803
S D KY+ S T +A TG AAA
Sbjct: 186 SVDQKYNVSGTTMAAASATGRTVAAAA 212
>gi|255552904|ref|XP_002517495.1| nucleic acid binding protein, putative
[Ricinus communis]
Length = 240
Score = 176 bits (446), Expect = 6e-042
Identities = 90/142 (63%), Positives = 109/142 (76%)
Frame = +3
Query: 504 TFASSPGEAVTIAQQVVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIG 683
T+AS+PGEAVT+AQ+VVKT+I+KGY+L KDA KAK DES + S++ A K+AE+ IG
Sbjct: 93 TYASTPGEAVTVAQEVVKTMIAKGYILGKDALIKAKDFDESYKVSATTAAKVAELSNRIG 152
Query: 684 LTQNIQSSMEAVRSADDKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATTVVNSRYF 863
LT+ IQ+ ME +RS D+KYH S+ T SA+LVTGTAAV AAT TGK A AAA V NS YF
Sbjct: 153 LTEKIQAGMETLRSVDEKYHVSNITASAILVTGTAAVVAATYTGKAAVAAANAVANSSYF 212
Query: 864 ANGALWFSDALGRAAKAAAHMG 929
A GALW SD L RAA+AAA G
Sbjct: 213 AKGALWVSDVLIRAAQAAADFG 234
>gi|255558164|ref|XP_002520109.1| nucleic acid binding protein, putative
[Ricinus communis]
Length = 245
Score = 176 bits (445), Expect = 8e-042
Identities = 98/206 (47%), Positives = 132/206 (64%), Gaps = 5/206 (2%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
G+ EVT LSP TEKD++ FFS G +E VEI C G+ A TAYVTF++AY+ + A+LL
Sbjct: 5 GHAVEVTGLSPSTTEKDLYDFFSFSGSIEHVEIVRC-GDYACTAYVTFKNAYSQETAVLL 63
Query: 381 NGATIVDQTVWISMYGVYLHE----SNNLTREGDYTVTVTQSHADTFASSPGEAVTIAQQ 548
+GATI+++ V I+ +G Y+ E + R D + + S GEAV +AQ+
Sbjct: 64 SGATILEERVCITRWGHYIDEFDLWNTPSLRVEDERESTHPPERSQYVPSAGEAVIMAQE 123
Query: 549 VVKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSA 728
VVK +++KGYVL KD KAKA DES + +++ A K+AE IGL I + MEA++S
Sbjct: 124 VVKNMVAKGYVLGKDTLSKAKAFDESHQVTATAAAKVAEFTERIGLADKIFAGMEAMKSV 183
Query: 729 DDKYHFSDFTKSAVLVTGTAAVAAAT 806
D KYH SD TKSAV TG AVAAA+
Sbjct: 184 DQKYHVSDMTKSAVSATGRTAVAAAS 209
>gi|326509163|dbj|BAJ86974.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 244
Score = 169 bits (426), Expect = 1e-039
Identities = 91/201 (45%), Positives = 129/201 (64%), Gaps = 4/201 (1%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
GY EVTNLS A+E D+H FFS G +E +++ GG + TAYVTF++ YAL+ A+LL
Sbjct: 5 GYTVEVTNLSSSASENDLHEFFSFSGPIEHIDLIRSGGYGS-TAYVTFKEPYALETAVLL 63
Query: 381 NGATIVDQTVWISMYGVYLHESN---NLTREGDYTVTVTQSHADTFASSPGEAVTIAQQV 551
+GATIVDQ V IS +G SN T + + + + F ++P EA+T+AQ V
Sbjct: 64 SGATIVDQPVCISRWGQPDEPSNFWDRPTWQVEEEIEYRDYQSCQFNATPQEALTVAQDV 123
Query: 552 VKTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSAD 731
VKT++S+GY+LSKDA +A+A DES + S S A K AE+ R +GLT + + + A+RS D
Sbjct: 124 VKTMLSRGYILSKDALSRARAFDESHQLSGSAAAKAAELSRRLGLTDRVSAGVGAIRSVD 183
Query: 732 DKYHFSDFTKSAVLVTGTAAV 794
+ YH ++ TK+ TG AV
Sbjct: 184 ETYHVTETTKTVATATGRTAV 204
>gi|297844338|ref|XP_002890050.1| hypothetical protein ARALYDRAFT_312432
[Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 163 bits (411), Expect = 7e-038
Identities = 91/204 (44%), Positives = 128/204 (62%), Gaps = 3/204 (1%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
GY EVT LSP T+ D+ FFS G ++ ++I G A TAYV F+D+Y+ + A+LL
Sbjct: 6 GYGVEVTGLSPSVTQNDLIDFFSFSGAIQDIDIVR-SGEQACTAYVMFKDSYSQETAVLL 64
Query: 381 NGATIVDQTVWISMYGVYLHESN--NLTREGDYTVTVTQSHADTFASSPGEAVTIAQQVV 554
+GATI+DQ V I+ +G + E + N T +G + + + + GEAVT AQ+VV
Sbjct: 65 SGATILDQRVCITRWGQHHEEFDFWNATSQGSEDESNSHPYGQRGEFNAGEAVTKAQEVV 124
Query: 555 KTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADD 734
KT+++ G+VL KDA KAKA DES S++ K++++ + IGLT I + +EAVR D
Sbjct: 125 KTMLATGFVLGKDALSKAKAFDESHGVSAAAVAKVSQLEQRIGLTDKIFTGLEAVRMTDQ 184
Query: 735 KYHFSDFTKSAVLVTGTAAVAAAT 806
+YH SD KSAV TG A AAAT
Sbjct: 185 RYHVSDTAKSAVFATGRTAAAAAT 208
>gi|7262676|gb|AAF43934.1|AC012188_11 Contains similarity to Vip1 protein from
Schizosaccharomyces pombe gb|Y13635.1 and contains a RNA recognition
motif PF|00076. EST gb|AI996906 comes from this gene [Arabidopsis
thaliana]
Length = 431
Score = 160 bits (404), Expect = 4e-037
Identities = 91/204 (44%), Positives = 126/204 (61%), Gaps = 3/204 (1%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
GY EVT LSP T D+ FFS G ++ ++I G A TAYV F+D+Y+ + A+LL
Sbjct: 6 GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVR-SGEQACTAYVMFKDSYSQETAVLL 64
Query: 381 NGATIVDQTVWISMYGVYLHESN--NLTREGDYTVTVTQSHADTFASSPGEAVTIAQQVV 554
GATI+DQ V I+ +G + E + N T G + +Q +A + GEAVT AQ+VV
Sbjct: 65 TGATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEFNAGEAVTKAQEVV 124
Query: 555 KTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADD 734
K +++ G+VL KDA KAKA DES S++ +++++ + IGLT I + +EAVR D
Sbjct: 125 KIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQ 184
Query: 735 KYHFSDFTKSAVLVTGTAAVAAAT 806
+YH SD KSAV TG A AAAT
Sbjct: 185 RYHVSDTAKSAVFATGRTAAAAAT 208
>gi|18394102|ref|NP_563946.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 244
Score = 160 bits (404), Expect = 4e-037
Identities = 91/204 (44%), Positives = 126/204 (61%), Gaps = 3/204 (1%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
GY EVT LSP T D+ FFS G ++ ++I G A TAYV F+D+Y+ + A+LL
Sbjct: 6 GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVR-SGEQACTAYVMFKDSYSQETAVLL 64
Query: 381 NGATIVDQTVWISMYGVYLHESN--NLTREGDYTVTVTQSHADTFASSPGEAVTIAQQVV 554
GATI+DQ V I+ +G + E + N T G + +Q +A + GEAVT AQ+VV
Sbjct: 65 TGATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEFNAGEAVTKAQEVV 124
Query: 555 KTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADD 734
K +++ G+VL KDA KAKA DES S++ +++++ + IGLT I + +EAVR D
Sbjct: 125 KIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQ 184
Query: 735 KYHFSDFTKSAVLVTGTAAVAAAT 806
+YH SD KSAV TG A AAAT
Sbjct: 185 RYHVSDTAKSAVFATGRTAAAAAT 208
>gi|21618045|gb|AAM67095.1| unknown [Arabidopsis thaliana]
Length = 244
Score = 158 bits (399), Expect = 2e-036
Identities = 90/204 (44%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Frame = +3
Query: 201 GYVAEVTNLSPRATEKDVHSFFSHCGIVELVEITGCGGNDALTAYVTFRDAYALDMALLL 380
GY EVT LSP T D+ FFS G ++ ++I G A TAYV F+D+Y+ + A+LL
Sbjct: 6 GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVR-SGEQACTAYVMFKDSYSQETAVLL 64
Query: 381 NGATIVDQTVWISMYGVYLHESN--NLTREGDYTVTVTQSHADTFASSPGEAVTIAQQVV 554
GATI+DQ V I+ +G + E + N T G + + +A + GEAVT AQ+VV
Sbjct: 65 TGATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSHHYAQRSEFNAGEAVTKAQEVV 124
Query: 555 KTLISKGYVLSKDAFGKAKALDESQRFSSSVANKLAEIGRYIGLTQNIQSSMEAVRSADD 734
K +++ G+VL KDA KAKA DES S++ +++++ + IGLT I + +EAVR D
Sbjct: 125 KIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQ 184
Query: 735 KYHFSDFTKSAVLVTGTAAVAAAT 806
+YH SD KSAV TG A AAAT
Sbjct: 185 RYHVSDTAKSAVFATGRTAAAAAT 208
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,584,745,891,651
Number of Sequences: 15229318
Number of Extensions: 2584745891651
Number of Successful Extensions: 639272726
Number of sequences better than 0.0: 0
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