BLASTX 7.6.2
Query= UN21765 /QuerySize=1917
(1916 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 903 6e-263
TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 903 6e-263
TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (S... 364 2e-100
TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 359 5e-099
TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 359 5e-099
TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 359 5e-099
TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine hydrox... 355 7e-098
TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36... 348 1e-095
TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine hydrox... 325 6e-089
TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine hydrox... 314 1e-085
>TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 903 bits (2333), Expect = 6e-263
Identities = 455/516 (88%), Positives = 477/516 (92%), Gaps = 4/516 (0%)
Frame = +1
Query: 181 KPGGVKG----PVFAPVTKFSQQLNFNFPRPVRSLSLKRSLVAERRASPVSVPAVESSSD 348
+PG V+G P+ PVTKFSQQL FN +P RS LKR+LV+E RAS VS+P VE SS
Sbjct: 15 QPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMRASSVSLPNVEISSK 74
Query: 349 AIPFEDYGRSEVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGL 528
IPFEDYG EVDPEV II KEK+RQFRSLELIASENFTSRAVME VGSCLTNKYSEGL
Sbjct: 75 EIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGL 134
Query: 529 PGKRYYGGNEFIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDR 708
PGKRYYGGNE+IDQL TLCQNRALA FRLDSTKWGVNVQPLSGSPANFAVYTAIL PHDR
Sbjct: 135 PGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDR 194
Query: 709 IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKL 888
IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTA LFRPKL
Sbjct: 195 IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKL 254
Query: 889 IIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHK 1068
IIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHK
Sbjct: 255 IIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHK 314
Query: 1069 SLRGPRGGMIFFKKDPVNGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKA 1248
SLRGPRGGMIFF+KDP+NGV+LESA+NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKA
Sbjct: 315 SLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKA 374
Query: 1249 YQKRVVANCRALANRLVELGFDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNK 1428
YQKRVV+NCRALANRLVELGF LVSGGSDNHLVLVDLRP+GMDGARVEKILDMASITLNK
Sbjct: 375 YQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNK 434
Query: 1429 NSVPGDKSALVPGGIRIGTPAMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGE 1608
NSVPGDKSALVPGGIRIG+PAMTTRGL+EKDFVVVAD IKEGVEITMEAKK GSKL +
Sbjct: 435 NSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQD 494
Query: 1609 FTKLVTSPDFALKEKVESLKERVESFTSRFPIPGV* 1716
F K VTSP+F LKE+V+SLKERVE+FTSRFPIPGV*
Sbjct: 495 FNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV* 530
>TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 903 bits (2333), Expect = 6e-263
Identities = 455/516 (88%), Positives = 477/516 (92%), Gaps = 4/516 (0%)
Frame = +1
Query: 181 KPGGVKG----PVFAPVTKFSQQLNFNFPRPVRSLSLKRSLVAERRASPVSVPAVESSSD 348
+PG V+G P+ PVTKFSQQL FN +P RS LKR+LV+E RAS VS+P VE SS
Sbjct: 15 QPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMRASSVSLPNVEISSK 74
Query: 349 AIPFEDYGRSEVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGL 528
IPFEDYG EVDPEV II KEK+RQFRSLELIASENFTSRAVME VGSCLTNKYSEGL
Sbjct: 75 EIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGL 134
Query: 529 PGKRYYGGNEFIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDR 708
PGKRYYGGNE+IDQL TLCQNRALA FRLDSTKWGVNVQPLSGSPANFAVYTAIL PHDR
Sbjct: 135 PGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDR 194
Query: 709 IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKL 888
IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTA LFRPKL
Sbjct: 195 IMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKL 254
Query: 889 IIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHK 1068
IIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHK
Sbjct: 255 IIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHK 314
Query: 1069 SLRGPRGGMIFFKKDPVNGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKA 1248
SLRGPRGGMIFF+KDP+NGV+LESA+NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKA
Sbjct: 315 SLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKA 374
Query: 1249 YQKRVVANCRALANRLVELGFDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNK 1428
YQKRVV+NCRALANRLVELGF LVSGGSDNHLVLVDLRP+GMDGARVEKILDMASITLNK
Sbjct: 375 YQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNK 434
Query: 1429 NSVPGDKSALVPGGIRIGTPAMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGE 1608
NSVPGDKSALVPGGIRIG+PAMTTRGL+EKDFVVVAD IKEGVEITMEAKK GSKL +
Sbjct: 435 NSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQD 494
Query: 1609 FTKLVTSPDFALKEKVESLKERVESFTSRFPIPGV* 1716
F K VTSP+F LKE+V+SLKERVE+FTSRFPIPGV*
Sbjct: 495 FNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV* 530
>TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE
TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/
poly(U) binding | chr4:17831891-17834742 REVERSE
Length = 518
Score = 364 bits (932), Expect = 2e-100
Identities = 171/244 (70%), Positives = 204/244 (83%)
Frame = +1
Query: 379 EVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNE 558
EVDPE+ +II+ EK RQ++ LELI SENFTS +VM+ VGS +TNKYSEG PG RYYGGNE
Sbjct: 57 EVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE 116
Query: 559 FIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGG 738
+ID TLCQ RAL FRLD KWGVNVQPLSGSPANF VYTA+LKPH+RIM LDLPHGG
Sbjct: 117 YIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGG 176
Query: 739 HLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYSR 918
HLSHG+ T +++S SI+FE+MPYRLDESTG +DYD +EK+A LFRPKLI+AGASAY+R
Sbjct: 177 HLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYAR 236
Query: 919 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 1098
+DY R+RK+ + A ++ DMAHISGLVAA+V+ PF+Y D+VTTTTHKSLRGPRG MI
Sbjct: 237 LYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMI 296
Query: 1099 FFKK 1110
FF+K
Sbjct: 297 FFRK 300
Score = 208 bits (528), Expect = 1e-053
Identities = 101/194 (52%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALANRLVELG 1308
+ E IN AVFPGLQGGPHNHTI GLAV LK A + E+KAYQ++V++N A L+E G
Sbjct: 315 DFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERG 374
Query: 1309 FDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTP 1488
++LVSGG+DNHLVLV+L+P G+DG+RVEK+L+ I NKN+VPGD SA+VPGGIR+GTP
Sbjct: 375 YELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTP 434
Query: 1489 AMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTKLVTSPDFALKEKVESLK 1668
A+T+RG E+DF VA+ + V I ++ K G+KL +F + S ++ ++ L+
Sbjct: 435 ALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSS-TIQSEIAKLR 493
Query: 1669 ERVESFTSRFPIPG 1710
VE F +FP G
Sbjct: 494 HEVEEFAKQFPTIG 507
>TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 518
Score = 359 bits (920), Expect = 5e-099
Identities = 169/244 (69%), Positives = 202/244 (82%)
Frame = +1
Query: 379 EVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNE 558
E+DPEV +II+ EK RQ++ ELI SENFTS +VM+ VGS +TNKYSEG PG RYYGGNE
Sbjct: 57 EIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNE 116
Query: 559 FIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGG 738
+ID TLCQ RAL F+LD +KWGVNVQ LSGSPANF VYTA+LKPH+RIM LDLPHGG
Sbjct: 117 YIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG 176
Query: 739 HLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYSR 918
HLSHG+ T +++S SI+FE+MPYRLDE+TG +DYD LEK+A LFRPKLI+AGASAY+R
Sbjct: 177 HLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYAR 236
Query: 919 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 1098
+DY R+RK+ + A ++ DMAHISGLVAA V+ PFEY D+VTTTTHKSLRGPRG MI
Sbjct: 237 LYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 296
Query: 1099 FFKK 1110
FF+K
Sbjct: 297 FFRK 300
Score = 209 bits (530), Expect = 8e-054
Identities = 103/194 (53%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALANRLVELG 1308
+ E IN AVFPGLQGGPHNHTI GLAV LK A++PE+KAYQ +V+ NC A L+ G
Sbjct: 315 DYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAETLLAKG 374
Query: 1309 FDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTP 1488
+DLVSGG+DNHLVLV+L+ G+DG+RVEK+L++ I NKN+VPGD SA+VPGGIR+GTP
Sbjct: 375 YDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTP 434
Query: 1489 AMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTKLVTSPDFALKEKVESLK 1668
A+T+RG E+DF VA+ V+I ++ K G+KL +F + S + L+ ++ L+
Sbjct: 435 ALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNE-KLQSEMSKLR 493
Query: 1669 ERVESFTSRFPIPG 1710
E VE + +FP G
Sbjct: 494 EMVEEYAKQFPTIG 507
>TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 359 bits (920), Expect = 5e-099
Identities = 169/244 (69%), Positives = 202/244 (82%)
Frame = +1
Query: 379 EVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNE 558
E+DPEV +II+ EK RQ++ ELI SENFTS +VM+ VGS +TNKYSEG PG RYYGGNE
Sbjct: 57 EIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNE 116
Query: 559 FIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGG 738
+ID TLCQ RAL F+LD +KWGVNVQ LSGSPANF VYTA+LKPH+RIM LDLPHGG
Sbjct: 117 YIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG 176
Query: 739 HLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYSR 918
HLSHG+ T +++S SI+FE+MPYRLDE+TG +DYD LEK+A LFRPKLI+AGASAY+R
Sbjct: 177 HLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYAR 236
Query: 919 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 1098
+DY R+RK+ + A ++ DMAHISGLVAA V+ PFEY D+VTTTTHKSLRGPRG MI
Sbjct: 237 LYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 296
Query: 1099 FFKK 1110
FF+K
Sbjct: 297 FFRK 300
Score = 136 bits (342), Expect = 5e-032
Identities = 68/139 (48%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = +1
Query: 1294 LVELGFDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGI 1473
L+ G+DLVSGG+DNHLVLV+L+ G+DG+RVEK+L++ I NKN+VPGD SA+VPGGI
Sbjct: 386 LLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGI 445
Query: 1474 RIGTPAMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTKLVTSPDFALKEK 1653
R+GTPA+T+RG E+DF VA+ V+I ++ K G+KL +F + S + L+ +
Sbjct: 446 RMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNE-KLQSE 504
Query: 1654 VESLKERVESFTSRFPIPG 1710
+ L+E VE + +FP G
Sbjct: 505 MSKLREMVEEYAKQFPTIG 523
Score = 77 bits (189), Expect = 3e-014
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALA 1287
+ E IN AVFPGLQGGPHNHTI GLAV LK A++PE+KAYQ +V+ NC A
Sbjct: 315 DYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFA 367
>TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 359 bits (920), Expect = 5e-099
Identities = 169/244 (69%), Positives = 202/244 (82%)
Frame = +1
Query: 379 EVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNE 558
E+DPEV +II+ EK RQ++ ELI SENFTS +VM+ VGS +TNKYSEG PG RYYGGNE
Sbjct: 57 EIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNE 116
Query: 559 FIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGG 738
+ID TLCQ RAL F+LD +KWGVNVQ LSGSPANF VYTA+LKPH+RIM LDLPHGG
Sbjct: 117 YIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG 176
Query: 739 HLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYSR 918
HLSHG+ T +++S SI+FE+MPYRLDE+TG +DYD LEK+A LFRPKLI+AGASAY+R
Sbjct: 177 HLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYAR 236
Query: 919 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 1098
+DY R+RK+ + A ++ DMAHISGLVAA V+ PFEY D+VTTTTHKSLRGPRG MI
Sbjct: 237 LYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 296
Query: 1099 FFKK 1110
FF+K
Sbjct: 297 FFRK 300
Score = 136 bits (342), Expect = 5e-032
Identities = 68/139 (48%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = +1
Query: 1294 LVELGFDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGI 1473
L+ G+DLVSGG+DNHLVLV+L+ G+DG+RVEK+L++ I NKN+VPGD SA+VPGGI
Sbjct: 386 LLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGI 445
Query: 1474 RIGTPAMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTKLVTSPDFALKEK 1653
R+GTPA+T+RG E+DF VA+ V+I ++ K G+KL +F + S + L+ +
Sbjct: 446 RMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNE-KLQSE 504
Query: 1654 VESLKERVESFTSRFPIPG 1710
+ L+E VE + +FP G
Sbjct: 505 MSKLREMVEEYAKQFPTIG 523
Score = 77 bits (189), Expect = 3e-014
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALA 1287
+ E IN AVFPGLQGGPHNHTI GLAV LK A++PE+KAYQ +V+ NC A
Sbjct: 315 DYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFA 367
>TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine
hydroxymethyltransferase 4); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:8048013-8050021 REVERSE
Length = 472
Score = 355 bits (910), Expect = 7e-098
Identities = 170/258 (65%), Positives = 206/258 (79%), Gaps = 4/258 (1%)
Frame = +1
Query: 355 PFEDYGRS---EVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEG 525
P +G + VDPE+ ++I+KEK RQ R +ELIASENFTS AV+E +GS LTNKYSEG
Sbjct: 3 PVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEG 62
Query: 526 LPGKRYYGGNEFIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHD 705
+PG RYYGGNEFID++ LC++RAL F D WGVNVQP SGSPANFA YTA+L+PHD
Sbjct: 63 IPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHD 122
Query: 706 RIMGLDLPHGGHLSHGFMTA-KRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRP 882
RIMGLDLP GGHL+HG+ T+ +++S TSIYFES+PY+++ +TG +DYD LE+ A FRP
Sbjct: 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRP 182
Query: 883 KLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTT 1062
KL+I G SAY RD+DY R R IAD VGA L+ DMAHISGLVAA A+PFEYCD+VTTTT
Sbjct: 183 KLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTT 242
Query: 1063 HKSLRGPRGGMIFFKKDP 1116
HKSLRGPR GMIF++K P
Sbjct: 243 HKSLRGPRAGMIFYRKGP 260
Score = 193 bits (489), Expect = 4e-049
Identities = 101/195 (51%), Positives = 132/195 (67%), Gaps = 8/195 (4%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALANRLVELG 1308
+ E IN AVFP LQGGPHNH IG LAV LK A +P FK Y K+V AN AL N L+ G
Sbjct: 274 DFEDKINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALGNYLMSKG 333
Query: 1309 FDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTP 1488
+ +V+ G++NHLVL DLRPLG+ G +VEK+ D+ SITLNKN+V GD SAL PGG+RIG P
Sbjct: 334 YQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGAP 393
Query: 1489 AMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTK-LVTSPDFALKEKVESL 1665
AMT+RGL EKDF + + + V +T++ +K G L +F K LV + D ++ L
Sbjct: 394 AMTSRGLVEKDFEQIGEFLSRAVTLTLDIQK-TYGKLLKDFNKGLVNNKD------LDQL 446
Query: 1666 KERVESFTSRFPIPG 1710
K VE F++ + +PG
Sbjct: 447 KADVEKFSASYEMPG 461
>TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36 (EMBRYO SAC
DEVELOPMENT ARREST 37); catalytic/ glycine hydroxymethyltransferase/
pyridoxal phosphate binding | chr4:8032146-8033718 REVERSE
Length = 471
Score = 348 bits (891), Expect = 1e-095
Identities = 161/246 (65%), Positives = 202/246 (82%), Gaps = 1/246 (0%)
Frame = +1
Query: 382 VDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNEF 561
VDPE+ ++I+KEK+RQ R +ELIA+ENFTS AVME +GSCLTNKYSEG+PG RYYGG EF
Sbjct: 15 VDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEF 74
Query: 562 IDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGGH 741
ID++ +LC++R+L F + KWGVNVQP SGSPANFA YTA+L+PHDRIMGLDLP GGH
Sbjct: 75 IDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGH 134
Query: 742 LSHGFMTA-KRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYSR 918
++HG+ ++ + +S TSIYFE++PY++D TG +DYD LE+ A FRPKLII G ++Y R
Sbjct: 135 ITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPR 194
Query: 919 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 1098
++DY R R +AD VGAFL+ DMAH S LVAA ADPFEYCD+VTT+THKSLRGPR GMI
Sbjct: 195 EWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMI 254
Query: 1099 FFKKDP 1116
F++K P
Sbjct: 255 FYRKGP 260
Score = 182 bits (460), Expect = 1e-045
Identities = 91/194 (46%), Positives = 130/194 (67%), Gaps = 6/194 (3%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALANRLVELG 1308
+ ++ IN+AVFP LQ GPHN+ IG LAV LK +P FK Y K+V AN LA+ L+ G
Sbjct: 274 DFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKG 333
Query: 1309 FDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTP 1488
+ LV+ G+DNHL+L DLRPLG+ G +VEK+ ++ ITLN+N+V GD S L PGG+RIGTP
Sbjct: 334 YTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTP 393
Query: 1489 AMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTKLVTSPDFALKEKVESLK 1668
AMT+RGL EKDF + + + V IT++ ++ G + +F K + + ++++ +K
Sbjct: 394 AMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQY-GKVMKDFNKGLVN-----NKEIDEIK 447
Query: 1669 ERVESFTSRFPIPG 1710
VE FT F +PG
Sbjct: 448 ADVEEFTYDFDMPG 461
>TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine
hydroxymethyltransferase 6); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:7754599-7757087 FORWARD
Length = 600
Score = 325 bits (833), Expect = 6e-089
Identities = 156/245 (63%), Positives = 192/245 (78%), Gaps = 1/245 (0%)
Frame = +1
Query: 379 EVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNE 558
E DPE+ E ++KEK RQFR +ELIASENF RAVME +GS LTNKYSEG+PG RYY GN+
Sbjct: 144 EADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQ 203
Query: 559 FIDQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGG 738
+IDQ+ LCQ RALA F L+ KWGVNVQP S + ANFAV+T +L P +RIMGLD P GG
Sbjct: 204 YIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGERIMGLDSPSGG 263
Query: 739 HLSHGFMT-AKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYS 915
H+SHG+ T ++VSG SI+FES PY++D TG +DYD LE+ A +RPK++I G S+Y
Sbjct: 264 HMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYP 323
Query: 916 RDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGM 1095
RD+++PR R IAD GA LM DMA ISGLVAA +PF+YCDIVT+TTHKSLRGPRGG+
Sbjct: 324 RDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLRGPRGGI 383
Query: 1096 IFFKK 1110
IF+K+
Sbjct: 384 IFYKR 388
Score = 151 bits (381), Expect = 1e-036
Identities = 78/190 (41%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALANRLVELG 1308
+ E IN +VFP LQGGPHN+ I LA+ LK A SPE+K Y ++V N +ALA+ L+
Sbjct: 409 DFEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALISRK 468
Query: 1309 FDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTP 1488
L++GG+DNHL+L DL PLG+ G EK+ +M IT+NK ++ + + PGG+RIG+P
Sbjct: 469 CKLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSP 528
Query: 1489 AMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTKLVTSPDFALKEKVESLK 1668
AMT+RG E +F +AD + +I A++ + G+ K + KE + L+
Sbjct: 529 AMTSRGCLEPEFETMADFLYRAAQIASAAQR-----EHGKLQKEPLKSIYHCKE-IADLR 582
Query: 1669 ERVESFTSRF 1698
+VE+F ++F
Sbjct: 583 NQVEAFATQF 592
>TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine
hydroxymethyltransferase 7); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:13696240-13698576 REVERSE
Length = 599
Score = 314 bits (804), Expect = 1e-085
Identities = 148/245 (60%), Positives = 190/245 (77%), Gaps = 1/245 (0%)
Frame = +1
Query: 385 DPEVDEIIKKEKNRQFRSLELIASENFTSRAVMETVGSCLTNKYSEGLPGKRYYGGNEFI 564
DP++ E+++KEK RQ R +ELIASENF RAVME +GS LTNKYSEG+PG RYY GN++I
Sbjct: 142 DPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYI 201
Query: 565 DQL*TLCQNRALATFRLDSTKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPHGGHL 744
DQ+ LC RAL F L+S KWGVNVQP S + ANFAVYT +L P +RIMGLD P GGH+
Sbjct: 202 DQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGERIMGLDSPSGGHM 261
Query: 745 SHGFMT-AKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTAALFRPKLIIAGASAYSRD 921
SHG+ T +++S SI+FES PY+++ TG +DYD LE A +RPK++I G S+Y RD
Sbjct: 262 SHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPKILICGGSSYPRD 321
Query: 922 FDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMIF 1101
+D+ R+R+IAD GA LM DMAHISGLVA ++PF++CDIVT+TTHK LRGPRGG+IF
Sbjct: 322 WDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTHKGLRGPRGGIIF 381
Query: 1102 FKKDP 1116
+++ P
Sbjct: 382 YRRGP 386
Score = 164 bits (414), Expect = 2e-040
Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 8/194 (4%)
Frame = +1
Query: 1129 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVANCRALANRLVELG 1308
+LE IN AVFP LQGGPHN+ I LA+ LK +PE+KAY +++ N +ALA L+
Sbjct: 405 DLEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRK 464
Query: 1309 FDLVSGGSDNHLVLVDLRPLGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTP 1488
LV+GG+DNHL+L DL P+G+ G EK+ +M ITLNK ++ GD + PGG+RIGTP
Sbjct: 465 CRLVTGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTP 524
Query: 1489 AMTTRGLTEKDFVVVADLIKEGVEITMEAKKLVSGSKLGEFTK-LVTSPDFALKEKVESL 1665
AMTTRG E DF +AD + + +IT A + G EF K L T+ D A L
Sbjct: 525 AMTTRGCIESDFETMADFLIKAAQIT-SALQREHGKSHKEFVKSLCTNKDIA------EL 577
Query: 1666 KERVESFTSRFPIP 1707
+ RVE+F ++ +P
Sbjct: 578 RNRVEAFALQYEMP 591
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,303,094,278
Number of Sequences: 33410
Number of Extensions: 11303094278
Number of Successful Extensions: 370280146
Number of sequences better than 0.0: 0
|
