BLASTX 7.6.2
Query= UN21784 /QuerySize=1401
(1400 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q2RK16|RLMN_MOOTA Ribosomal RNA large subunit methyltransfera... 207 2e-052
sp|Q6MDD0|RLMN2_PARUW Ribosomal RNA large subunit methyltransfer... 199 5e-050
sp|B2A0B9|RLMN3_OPITP Ribosomal RNA large subunit methyltransfer... 198 1e-049
sp|Q1DCU1|RLMN1_MYXXD Ribosomal RNA large subunit methyltransfer... 196 3e-049
sp|A1AL40|RLMN_PELPD Ribosomal RNA large subunit methyltransfera... 196 4e-049
sp|Q67PQ7|RLMN_SYMTH Ribosomal RNA large subunit methyltransfera... 193 3e-048
sp|Q72HC1|RLMN_THET2 Ribosomal RNA large subunit methyltransfera... 193 4e-048
sp|Q5SGZ3|RLMN_THET8 Ribosomal RNA large subunit methyltransfera... 192 8e-048
sp|A6H1B8|RLMN_FLAPJ Ribosomal RNA large subunit methyltransfera... 191 1e-047
sp|Q8RFZ9|RLMN_FUSNN Ribosomal RNA large subunit methyltransfera... 190 4e-047
sp|A0LY94|RLMN_GRAFK Ribosomal RNA large subunit methyltransfera... 185 9e-046
sp|B0C9F4|RLMN_ACAM1 Ribosomal RNA large subunit methyltransfera... 183 3e-045
sp|B2J6D0|RLMN_NOSP7 Ribosomal RNA large subunit methyltransfera... 182 8e-045
sp|Q55880|RLMN_SYNY3 Ribosomal RNA large subunit methyltransfera... 181 2e-044
sp|A4IM49|RLMN_GEOTN Ribosomal RNA large subunit methyltransfera... 180 3e-044
sp|Q5L0S1|RLMN_GEOKA Ribosomal RNA large subunit methyltransfera... 179 4e-044
sp|Q8R9T4|RLMN_THETN Ribosomal RNA large subunit methyltransfera... 178 9e-044
sp|A9KK15|CFR_CLOPH Ribosomal RNA large subunit methyltransferas... 178 1e-043
sp|Q8EVK0|RLMN_MYCPE Ribosomal RNA large subunit methyltransfera... 178 1e-043
sp|Q8DG98|RLMN_THEEB Ribosomal RNA large subunit methyltransfera... 177 2e-043
>sp|Q2RK16|RLMN_MOOTA Ribosomal RNA large subunit methyltransferase N
OS=Moorella thermoacetica (strain ATCC 39073) GN=rlmN PE=3 SV=1
Length = 354
Score = 207 bits (526), Expect = 2e-052
Identities = 119/286 (41%), Positives = 175/286 (61%), Gaps = 23/286 (8%)
Frame = +3
Query: 321 SSDGTTSKLLIKLQNGAFVEAVIMRYDTRLGMCGGKPRPGGVRSTLCISSQVGCKMGCTF 500
++DG T KLL+ L +G +E V+M Y + G R+T C+SSQVGC MGC+F
Sbjct: 75 AADGLTRKLLLGLGDGNSIECVLMIY-----------KDGRRRNTACLSSQVGCAMGCSF 123
Query: 501 CATGSMGFKSNLTSGEIVEQ-LVHASRLAD------IRNIVFMGMGEPLNNYNAVVEAVR 659
CATG G + NLT+ EI+ Q L + LA+ I NIVFMGMGEPLNNY AV++ VR
Sbjct: 124 CATGQGGLQRNLTASEIILQALALGAELAEGEGGNRISNIVFMGMGEPLNNYEAVMKGVR 183
Query: 660 AMLKQP--FQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAPVQEIRCQIMPAARA 833
+ + P + +S +RIT+ST G+V I +L + P + LAVSLHA E+R ++MP R
Sbjct: 184 -IFEDPSGWGISHRRITLSTCGIVPGIERLAREKPPLELAVSLHAVTNELRDKLMPINRR 242
Query: 834 FPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLKTFQVVINLIPFNPI 1013
+PL++L+ A + + + + +++ EY ++ GVND+ E+A L LL+ +N+IP NP+
Sbjct: 243 YPLEELIPACRRYAEITGRRVTFEYALIAGVNDRREDARGLSRLLRDMLAFVNIIPLNPV 302
Query: 1014 GSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQL 1151
S FK + +F +L+E + +R GQDI+ ACGQL
Sbjct: 303 AG-SGFKGVPPAAARAFVALLQEA-GLEAAIRDSRGQDIAAACGQL 346
>sp|Q6MDD0|RLMN2_PARUW Ribosomal RNA large subunit methyltransferase N 2
OS=Protochlamydia amoebophila (strain UWE25) GN=rlmN2 PE=3 SV=2
Length = 358
Score = 199 bits (505), Expect = 5e-050
Identities = 102/260 (39%), Positives = 164/260 (63%), Gaps = 8/260 (3%)
Frame = +3
Query: 441 GVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVH-----ASRLADIRNIVF 605
G+R T+C+SSQVGC C FCA+G GF NL EI+EQ++ +S+ + ++V+
Sbjct: 97 GIRRTVCVSSQVGCPAKCAFCASGQQGFFRNLRPTEIIEQILQINAWLSSKGEKVSHVVY 156
Query: 606 MGMGEPLNNYNAVVEAVRAMLKQPF-QLSPKRITISTVGVVHAINKLHNDLPGISLAVSL 782
MGMGEPL NY +VV ++R + F +S +RIT+STVGVV I +L + ++L +SL
Sbjct: 157 MGMGEPLKNYESVVASIRVLSHPDFCNISQRRITVSTVGVVEGIKRLSKEGLKVNLVLSL 216
Query: 783 HAPVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGE 962
HAP Q IR +I+P AR +PL+++++++ + + +++ I EY +L G+ND ++AH+L
Sbjct: 217 HAPNQHIRKKIIPYARKYPLEEILESMDEYAQKTKRDITFEYTLLAGINDHPDHAHELAH 276
Query: 963 LLKTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGAC 1142
LLK Q +NLIP+NPI + K K+++ F+ +L ++ I T R G DI AC
Sbjct: 277 LLKGKQCTVNLIPYNPIPGL-RLKRPEKKAIKQFRSVLYGSH-IVNTCRYTKGDDIGAAC 334
Query: 1143 GQLVVNQPDNKRTPEPLRDI 1202
GQL + + + + L+++
Sbjct: 335 GQLALQEREGQTGLPMLKEV 354
>sp|B2A0B9|RLMN3_OPITP Ribosomal RNA large subunit methyltransferase N 3
OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=rlmN3 PE=3 SV=1
Length = 374
Score = 198 bits (502), Expect = 1e-049
Identities = 127/323 (39%), Positives = 186/323 (57%), Gaps = 26/323 (8%)
Frame = +3
Query: 228 WDEIPSLPTAAYTLLHSKFKTFTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVIMRYDTR 407
WD + +LP T L F ++L S+D T KLL++L++G+ +E VI+R
Sbjct: 47 WDGMTNLPKPLRTWLDDTFDLMPATLVLNKQSAD-VTDKLLLELRDGSLIETVIIRAPQE 105
Query: 408 LGMCGGKPRPGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHA----- 572
G+ G+ R T+CIS+QVGC MGC FCA+G G K +L++GEIV QL+
Sbjct: 106 -GV--GQDHS---RKTICISTQVGCAMGCVFCASGLAGLKRDLSAGEIVAQLLQVCYRED 159
Query: 573 -------SRLADIRNIVFMGMGEPLNNYNAVVEAVRAMLKQPFQL--SPKRITISTVGVV 725
LA NIV MGMGEPL NY+A++ A+ +L + L +RIT+ST G+V
Sbjct: 160 ALTPRAHMELASFDNIVVMGMGEPLANYDALIRAL-TILNADWGLGFGARRITVSTSGLV 218
Query: 726 HAINKLHNDLPGISLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIE 905
I +L ++ G LA+SLH E+R +IMP +AFPL KL+ A++AF + + I +E
Sbjct: 219 PKILQLADEPLGFRLAISLHGATDEVREKIMPVNKAFPLAKLLPAVKAFSEKHGRMITLE 278
Query: 906 YIMLDGVNDQEENAHQLGELLKTFQVVINLIPFNPIGSTSQFKTS-TKQSVSSFQKILRE 1082
+I++DGVND E A +L ++ +NLIP+N + + + S T+Q F +LR
Sbjct: 279 FILIDGVNDSLEQAEKLRDIALDLHAHVNLIPYNTVEGLAWKRPSITRQ--ERFADVLR- 335
Query: 1083 TYNIRTTVRKEMGQDISGACGQL 1151
+ T+R+E G DI ACGQL
Sbjct: 336 ARRVSVTLRREKGHDIDAACGQL 358
>sp|Q1DCU1|RLMN1_MYXXD Ribosomal RNA large subunit methyltransferase N 1
OS=Myxococcus xanthus (strain DK 1622) GN=rlmN1 PE=3 SV=1
Length = 359
Score = 196 bits (498), Expect = 3e-049
Identities = 106/242 (43%), Positives = 152/242 (62%), Gaps = 10/242 (4%)
Frame = +3
Query: 447 RSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRL-----ADIRNIVFMG 611
R+T+CIS+Q GC MGC FCATG MG +LT GEIV Q++H +R+ +RN+V MG
Sbjct: 105 RATVCISTQAGCAMGCVFCATGQMGLSRHLTPGEIVGQILHVNRILRASGETLRNVVLMG 164
Query: 612 MGEPLNNYNAVVEAVRAMLKQ-PFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
MGEPL+NY + AV ++ + P+ IT+STVGVV I +L ++ I LAVSLH
Sbjct: 165 MGEPLHNYEHTMSAVDVLVDALGLAMGPRFITLSTVGVVPGIRRLADEERPIHLAVSLHG 224
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
R ++PA R +PL +LMDA + + + +++IF E+ ++ G ND E+AH LG+LL
Sbjct: 225 ATDAERAALVPAGRRWPLDELMDACRYYSEKRKRRIFFEWTLISGRNDTAEHAHTLGQLL 284
Query: 969 KTFQVVINLIPFNP-IGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACG 1145
+ +N+IP NP +G S +SV +FQ +L TY++ +TVR+ G DI CG
Sbjct: 285 RGMDAHVNVIPLNPTVGYDG--GPSRPESVRAFQDVL-ATYDVPSTVRQRRGIDIDAGCG 341
Query: 1146 QL 1151
QL
Sbjct: 342 QL 343
>sp|A1AL40|RLMN_PELPD Ribosomal RNA large subunit methyltransferase N
OS=Pelobacter propionicus (strain DSM 2379) GN=rlmN PE=3 SV=1
Length = 347
Score = 196 bits (497), Expect = 4e-049
Identities = 104/240 (43%), Positives = 150/240 (62%), Gaps = 3/240 (1%)
Frame = +3
Query: 435 PGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRLADIRNIVFMGM 614
P R+TLCISSQVGC MGC FC TG+ NLT+ EIV Q++ R +IRNIV MGM
Sbjct: 98 PDEGRNTLCISSQVGCAMGCAFCLTGTFRLTRNLTTAEIVNQIMAVRRDVEIRNIVMMGM 157
Query: 615 GEPLNNYNAVVEAVRAMLK-QPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAP 791
GEPL+N + V+ A+ M+ QLS +R+T+ST G+ + +L +LP ++LAVSL+A
Sbjct: 158 GEPLHNLDNVIPAIHIMIDGNGLQLSNRRVTVSTCGLAPEMERLGRELPNVNLAVSLNAT 217
Query: 792 VQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLK 971
E+R +IMP R +PL++L+ A + F ++K+ EY+ML G+ND E+A +L L
Sbjct: 218 TDELRDRIMPINRRYPLKELLSACREFPLPGRRKVTFEYVMLGGLNDTLEDAKRLLRLTS 277
Query: 972 TFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQL 1151
+NLIPFN +F++ T+ ++ +F K L + + + R G DIS ACGQL
Sbjct: 278 DIPNKVNLIPFNEF-QGCEFRSPTRAAIDAFHKYLIDRH-VTVITRDSRGSDISAACGQL 335
>sp|Q67PQ7|RLMN_SYMTH Ribosomal RNA large subunit methyltransferase N
OS=Symbiobacterium thermophilum GN=rlmN PE=3 SV=1
Length = 371
Score = 193 bits (489), Expect = 3e-048
Identities = 103/239 (43%), Positives = 155/239 (64%), Gaps = 6/239 (2%)
Frame = +3
Query: 450 STLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRLAD----IRNIVFMGMG 617
+++C+++QVGC+MGCTFCA+ G NLT+GEIV+Q+V R I +V MG G
Sbjct: 123 NSVCVTTQVGCRMGCTFCASTVGGLVRNLTAGEIVDQIVMMQRELPQGERISTVVLMGSG 182
Query: 618 EPLNNYNAVVEAVRAML-KQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAPV 794
EPL NY+ V++AVR + + + + ITIST G+V + +L + I+LA+SLHAP
Sbjct: 183 EPLENYDHVLKAVRLVHDPEGLNIGYRHITISTSGIVPGMRRLAEEGLPITLALSLHAPT 242
Query: 795 QEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLKT 974
E+R Q+MP AR +PL +++ A + + + + +++ EYI+++GVND E A QL LLK
Sbjct: 243 DELRRQLMPVARIWPLAEVLAAAREYGEKTGRRVTYEYILIEGVNDGPEEARQLARLLKG 302
Query: 975 FQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQL 1151
+NLIP NP+ Q++ + V+ F++IL E+ I TTVR+EMG +I ACGQL
Sbjct: 303 ALAHVNLIPMNPVAERPQYRRPGPERVNRFKEIL-ESNGIATTVRREMGGEIDAACGQL 360
>sp|Q72HC1|RLMN_THET2 Ribosomal RNA large subunit methyltransferase N OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rlmN PE=3 SV=1
Length = 355
Score = 193 bits (488), Expect = 4e-048
Identities = 104/246 (42%), Positives = 154/246 (62%), Gaps = 8/246 (3%)
Frame = +3
Query: 447 RSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLV-----HASRLADIRNIVFMG 611
R T+C+S+ VGC GCTFCATG++GF NLT+ EI++QL+ +IRN+V MG
Sbjct: 98 RKTVCLSTMVGCPAGCTFCATGALGFGRNLTAAEILDQLLTIAYHQGLSPREIRNVVLMG 157
Query: 612 MGEPLNNYNAVVEAVRAML-KQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
MGEPL N V++AVR ML K+ LSP+R+T+STVG+ I +L + G+ LA+SLHA
Sbjct: 158 MGEPLLNLRNVLKAVRIMLHKKALALSPRRVTLSTVGIPKGIYRLAEEDLGVRLALSLHA 217
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
P E R +I+P A +P+ ++M+A++ + +++++ EY +L GVND A L +LL
Sbjct: 218 PDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYTLLKGVNDHLWQARLLAKLL 277
Query: 969 KTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQ 1148
K +NLIPFNP + + K V +F + L+ + T++R GQD+ ACGQ
Sbjct: 278 KGLSAHVNLIPFNP-WEGAPVAGTPKAGVLAFAEELKR-LGVPTSIRWSRGQDVGAACGQ 335
Query: 1149 LVVNQP 1166
L + P
Sbjct: 336 LALKVP 341
>sp|Q5SGZ3|RLMN_THET8 Ribosomal RNA large subunit methyltransferase N OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rlmN PE=3 SV=1
Length = 355
Score = 192 bits (486), Expect = 8e-048
Identities = 104/246 (42%), Positives = 153/246 (62%), Gaps = 8/246 (3%)
Frame = +3
Query: 447 RSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLV-----HASRLADIRNIVFMG 611
R T+C+S+ VGC GCTFCATG++GF NLT+ EI++QL+ +IRN+V MG
Sbjct: 98 RKTVCLSTMVGCPAGCTFCATGALGFGRNLTAAEILDQLLTIAYHQGLSPREIRNVVLMG 157
Query: 612 MGEPLNNYNAVVEAVRAML-KQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
MGEPL N V++AVR ML K+ LSP+R+T+STVG+ I +L + G+ LA+SLHA
Sbjct: 158 MGEPLLNLRNVLKAVRIMLHKKALALSPRRVTLSTVGIPKGIYRLAEEDLGVRLALSLHA 217
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
P E R +I+P A +P+ ++M+A++ + +++++ EY +L GVND A L +LL
Sbjct: 218 PDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYTLLKGVNDHLWQARLLAKLL 277
Query: 969 KTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQ 1148
K +NLIPFNP T + V +F + L+ + T++R GQD+ ACGQ
Sbjct: 278 KGLSAHVNLIPFNPWEGAPVVGT-PRAGVLAFAEELKR-LGVPTSIRWSRGQDVGAACGQ 335
Query: 1149 LVVNQP 1166
L + P
Sbjct: 336 LALKVP 341
>sp|A6H1B8|RLMN_FLAPJ Ribosomal RNA large subunit methyltransferase N
OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rlmN
PE=3 SV=1
Length = 347
Score = 191 bits (484), Expect = 1e-047
Identities = 116/315 (36%), Positives = 178/315 (56%), Gaps = 24/315 (7%)
Frame = +3
Query: 228 WDEIPSLPTAAYTLLHSKFKTFTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVIMRYDTR 407
++++ ++ +L F + ++ SSDGT K ++L +G VE+V++
Sbjct: 45 FEDMTNVSKGTRQMLVENFVINHIKVDTMQRSSDGTV-KNAVRLHDGLIVESVLI----- 98
Query: 408 LGMCGGKPRPGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRLA- 584
P R+T C+SSQVGC + C FCAT + NL GEI +Q++ R +
Sbjct: 99 ---------PTETRTTACVSSQVGCSLDCNFCATARLKRMRNLEPGEIYDQVLAIDRESK 149
Query: 585 -----DIRNIVFMGMGEPLNNYNAVVEAVRAML-KQPFQLSPKRITISTVGVVHAINKLH 746
+ NIVFMGMGEPL NYN V++A+ + + +SPKRIT+ST GV I K+
Sbjct: 150 LYFNRPLSNIVFMGMGEPLMNYNNVIKAIDMITSSEGLGMSPKRITVSTSGVSKMIKKMA 209
Query: 747 NDLPGISLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGV 926
+D LAVSLH+ V+EIR +IMP ++FPL +L +ALQ + ++ KI EY++ G+
Sbjct: 210 DDEVKFKLAVSLHSAVEEIRNKIMPFTKSFPLPELREALQYWYHKTKSKITYEYVVWKGI 269
Query: 927 NDQEENAHQLGELLKTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTV 1106
ND +E+ L + K +NLI +NPI +F+ ++ +S++++ K L E I V
Sbjct: 270 NDNKESVDALVKFCKHVPCKVNLIEYNPI-DDGEFQQASPESINAYIKAL-EANGIIAKV 327
Query: 1107 RKEMGQDISGACGQL 1151
R G+DI ACGQL
Sbjct: 328 RHSRGKDIDAACGQL 342
>sp|Q8RFZ9|RLMN_FUSNN Ribosomal RNA large subunit methyltransferase N
OS=Fusobacterium nucleatum subsp. nucleatum GN=rlmN PE=3 SV=1
Length = 358
Score = 190 bits (480), Expect = 4e-047
Identities = 113/316 (35%), Positives = 179/316 (56%), Gaps = 19/316 (6%)
Frame = +3
Query: 228 WDEIPSLPTAAYTLLHSKFKTFTSSLHSLFH--SSDGTTSKLLIKLQNGAFVEAVIMRYD 401
+DE+ +L +L K KT+ + L + S T K L +L++G +E V++R+
Sbjct: 45 FDEMTNLSLKDREIL--KEKTYIPFFNLLKYQVSKIDKTEKFLFELEDGGTIETVLLRHK 102
Query: 402 TRLGMCGGKPRPGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRL 581
+ +R+TLC+SSQVGC + C+FCATG G+ NL+ EI+ Q+ R
Sbjct: 103 --------DSKNKEIRNTLCVSSQVGCPVKCSFCATGQSGYMRNLSVSEILNQIYTVERR 154
Query: 582 -----ADIRNIVFMGMGEPLNNYNAVVEAVRAMLKQ-PFQLSPKRITISTVGVVHAINKL 743
++ N+VFMGMGEPL N + + +A+ + + +S ++ITIST GVV I K+
Sbjct: 155 LRKKGENLNNLVFMGMGEPLLNIDNLSKALSIISNENGINISKRKITISTSGVVSGIEKI 214
Query: 744 HNDLPGISLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDG 923
D I LA+SLH+ + E R +I+P + FPL+ L L +QK ++++I EYI++D
Sbjct: 215 LLDKIPIELAISLHSAINEKRDKIIPINKNFPLEDLSAVLIEYQKQTKRRITFEYILIDN 274
Query: 924 VNDQEENAHQLGELLKTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTT 1103
N E +A+ L + + F V+NLIP+N + + S K+ ++ F L+ + T
Sbjct: 275 FNISETDANALADFIHQFDHVVNLIPYNEVEGAEHTRPSVKK-INKFYIYLKNVRKVNVT 333
Query: 1104 VRKEMGQDISGACGQL 1151
+R+E G DI GACGQL
Sbjct: 334 LRQEKGSDIDGACGQL 349
>sp|A0LY94|RLMN_GRAFK Ribosomal RNA large subunit methyltransferase N
OS=Gramella forsetii (strain KT0803) GN=rlmN PE=3 SV=1
Length = 352
Score = 185 bits (468), Expect = 9e-046
Identities = 121/315 (38%), Positives = 170/315 (53%), Gaps = 24/315 (7%)
Frame = +3
Query: 228 WDEIPSLPTAAYTLLHSKFKTFTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVIMRYDTR 407
+D++ ++ +L F + + SSDGT K +KL + VE+V++
Sbjct: 50 FDDMTNISKETRQMLKDNFVINHIRVDRMQRSSDGTI-KNAVKLHDALTVESVLI----- 103
Query: 408 LGMCGGKPRPGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLV---HASR 578
P R+T C+SSQVGC + C FCAT + NL EI +Q+V + SR
Sbjct: 104 ---------PTKSRTTACVSSQVGCSLDCQFCATAKLKRMRNLNPDEIYDQVVAIDNESR 154
Query: 579 L---ADIRNIVFMGMGEPLNNYNAVVEAVRAMLK-QPFQLSPKRITISTVGVVHAINKLH 746
L + NIVFMGMGEPL NYN V++AV + + +SPKRITIST GV I KL
Sbjct: 155 LYFDRPLSNIVFMGMGEPLMNYNNVMKAVEKITSPEGLGMSPKRITISTSGVPKMIKKLA 214
Query: 747 NDLPGISLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGV 926
+D I LAVSLH+ E+R QIMP FPL+ L +AL+ + + +I EYI+ +
Sbjct: 215 DDEAKIKLAVSLHSARNEVRTQIMPFNETFPLEDLREALEYWYSKTTSRITYEYIVWKDI 274
Query: 927 NDQEENAHQLGELLKTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTV 1106
ND E+A L K +NLI +NPI F+ + ++ + +Q +L E I TV
Sbjct: 275 NDTREDAQALVRFCKYVPCKVNLIEYNPI-DDGNFQQAAIEATNMYQDML-ERNGITVTV 332
Query: 1107 RKEMGQDISGACGQL 1151
R+ G+DI ACGQL
Sbjct: 333 RRSRGKDIDAACGQL 347
>sp|B0C9F4|RLMN_ACAM1 Ribosomal RNA large subunit methyltransferase N
OS=Acaryochloris marina (strain MBIC 11017) GN=rlmN PE=3 SV=1
Length = 351
Score = 183 bits (464), Expect = 3e-045
Identities = 105/245 (42%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Frame = +3
Query: 435 PGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQL--VHASRLADIRNIVFM 608
P R T+C+SSQVGC MGC FCATG ++ NL EIV+Q+ V + N+VFM
Sbjct: 103 PTQKRLTVCVSSQVGCPMGCDFCATGKGEYQRNLACHEIVDQVLTVQEDFQQRVGNVVFM 162
Query: 609 GMGEPLNNYNAVVEAVRAMLKQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
GMGEPL N V+ AVR+ L Q + + +T+STVG+ I KL I+LAVSLHA
Sbjct: 163 GMGEPLLNLEQVLAAVRS-LNQDVGIGQRSLTVSTVGIPKQILKLAQHQLQITLAVSLHA 221
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
Q IR Q++P+A+ +PL+KL+ +A+ + +++ EYI+L GVNDQ E+A +L L
Sbjct: 222 SNQRIRTQLVPSAKHYPLEKLLKDCRAYVTQTGRRVTFEYIVLSGVNDQTEHALELAHHL 281
Query: 969 KTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQ 1148
+ FQ +NLIP+NPI S ++ T++ + F L ++ +I ++R+ G D ACGQ
Sbjct: 282 RGFQSHVNLIPYNPI-SEVDYQRPTQKQLQQFLNSL-QSQHITASIRRSRGLDKDAACGQ 339
Query: 1149 LVVNQ 1163
L Q
Sbjct: 340 LRATQ 344
>sp|B2J6D0|RLMN_NOSP7 Ribosomal RNA large subunit methyltransferase N OS=Nostoc
punctiforme (strain ATCC 29133 / PCC 73102) GN=rlmN PE=3 SV=1
Length = 364
Score = 182 bits (460), Expect = 8e-045
Identities = 108/288 (37%), Positives = 172/288 (59%), Gaps = 14/288 (4%)
Frame = +3
Query: 297 SSLHSLFHSSDGTTSKLLIKLQNGAFVEAV-IMRYDTRLGMCGGKPRPGGVRSTLCISSQ 473
S+LH + DGT K L++L +G +E V I + R G P+ R T+C+S+Q
Sbjct: 83 STLHYRSVAPDGTV-KYLLRLTDGQIIETVGIPTFAER----GEGPK---ARLTVCVSTQ 134
Query: 474 VGCKMGCTFCATGSMGFKSNLTSGEIVEQL--VHASRLADIRNIVFMGMGEPLNNYNAVV 647
VGC M C FCATG G+K NL EI++Q+ V + N+VFMG+GEPL N V+
Sbjct: 135 VGCPMACDFCATGKGGYKRNLARHEIIDQVLTVQEDFQQRVSNVVFMGLGEPLLNTENVL 194
Query: 648 EAVRAMLKQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAPVQEIRCQIMPAA 827
A+++ L Q + + +T+STVG+ I + + I+LAVSLHAP Q +R +++P+A
Sbjct: 195 AALKS-LNQDIGIGQRSLTVSTVGIRDRIRQFAQNNLQITLAVSLHAPNQALREKLIPSA 253
Query: 828 RAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLKTFQVVINLIPFN 1007
RA+PL++L+ + + + + +++ EY++L GVND E+A +L + ++ FQ +NLIP+N
Sbjct: 254 RAYPLEELLAECREYVEITGRRVTFEYVLLAGVNDLPEHALELSKCMRGFQSHVNLIPYN 313
Query: 1008 PIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQL 1151
PI +K + + +F +L++ N +VR G + ACGQL
Sbjct: 314 PIQEV-DYKRPNRDRIEAFVNVLKQ-QNTAVSVRYSRGLEADAACGQL 359
>sp|Q55880|RLMN_SYNY3 Ribosomal RNA large subunit methyltransferase N
OS=Synechocystis sp. (strain PCC 6803) GN=rlmN PE=3 SV=1
Length = 350
Score = 181 bits (457), Expect = 2e-044
Identities = 101/241 (41%), Positives = 150/241 (62%), Gaps = 5/241 (2%)
Frame = +3
Query: 435 PGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQL--VHASRLADIRNIVFM 608
P R T+C+SSQVGC M C FCATG GF NL S EIV+Q+ V + N+VFM
Sbjct: 98 PSSKRLTVCVSSQVGCAMDCNFCATGKGGFIRNLESHEIVDQVLTVQEEFHERVSNVVFM 157
Query: 609 GMGEPLNNYNAVVEAVRAMLKQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
GMGEPL N VV+AV L Q + + +TISTVG+ I +L + ++ AVSLHA
Sbjct: 158 GMGEPLLNLPQVVKAVEC-LNQVVGIGQRALTISTVGLPGKIRQLADRHLQVTFAVSLHA 216
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
P Q +R ++P+AR +PL++L+ +A+ +++ +++ EY++L GVNDQ +A +L + L
Sbjct: 217 PNQTLRQSLIPSARHYPLEQLLADCRAYVETTGRRVTFEYVLLAGVNDQPVHAEELAQKL 276
Query: 969 KTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQ 1148
+ FQ +NLIP+NPI S ++ T+ ++ F ++L + + I +VR G ACGQ
Sbjct: 277 RGFQTHVNLIPYNPI-SEVDYQRPTEAQINQFAQVLSD-HRIAVSVRYSRGVQADAACGQ 334
Query: 1149 L 1151
L
Sbjct: 335 L 335
>sp|A4IM49|RLMN_GEOTN Ribosomal RNA large subunit methyltransferase N
OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rlmN PE=3 SV=1
Length = 364
Score = 180 bits (455), Expect = 3e-044
Identities = 92/240 (38%), Positives = 156/240 (65%), Gaps = 8/240 (3%)
Frame = +3
Query: 450 STLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRLAD-----IRNIVFMGM 614
+++C+++QVGC++GCTFCA+ G K +L +GEIV Q+V + D + +IV MG+
Sbjct: 117 NSVCVTTQVGCRIGCTFCASTLGGLKRHLEAGEIVAQVVQVQKALDETEERVSSIVVMGI 176
Query: 615 GEPLNNYNAVVEAVRAM-LKQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAP 791
GEP +NY+A+++ +R + + + + IT+ST G++ I + ++ I+ A+SLHAP
Sbjct: 177 GEPFDNYDALIKFLRIVNHSKGLNIGARHITVSTSGIIPKIYQFADEGMQINFAISLHAP 236
Query: 792 VQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLK 971
E+R ++MP +A+PL KLM+A++ + + + +++ EY + GVNDQ E+A QL ELLK
Sbjct: 237 TTELRTKLMPINKAYPLPKLMEAVRYYIEKTGRRVTFEYGLFGGVNDQLEHAEQLAELLK 296
Query: 972 TFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQL 1151
+ +NLIP N + + +T Q + +F++ L++ + I T+R+E G DI ACGQL
Sbjct: 297 GLKCHVNLIPVNYVPERNYVRTPRNQ-IFAFERALKK-HGINVTIRREHGHDIDAACGQL 354
>sp|Q5L0S1|RLMN_GEOKA Ribosomal RNA large subunit methyltransferase N
OS=Geobacillus kaustophilus GN=rlmN PE=3 SV=1
Length = 365
Score = 179 bits (454), Expect = 4e-044
Identities = 92/241 (38%), Positives = 157/241 (65%), Gaps = 10/241 (4%)
Frame = +3
Query: 450 STLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHASRLAD-----IRNIVFMGM 614
+++C+++QVGC++GCTFCA+ G K +L +GEIV Q+V + D + +IV MG+
Sbjct: 118 NSVCVTTQVGCRIGCTFCASTLGGLKRHLEAGEIVAQVVQVQKALDDTNERVSSIVVMGI 177
Query: 615 GEPLNNYNAVVEAVRAMLKQP--FQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
GEP +NY+A+++ +R ++ P + + IT+ST G++ I + ++ I+ A+SLHA
Sbjct: 178 GEPFDNYDALIKFLR-IVNHPKGLNIGARHITVSTSGIIPKIYQFADEGMQINFAISLHA 236
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
P E+R ++MP +A+PL KLM+A++ + + + +++ EY + GVNDQ E+A QL EL+
Sbjct: 237 PTNELRTKLMPINKAYPLPKLMEAVRYYIEKTGRRVTFEYGLFGGVNDQLEHAEQLAELI 296
Query: 969 KTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQ 1148
K + +NLIP N + + +T Q + +F++ L++ + I T+R+E G DI ACGQ
Sbjct: 297 KGLKCHVNLIPVNYVPERNYVRTPRSQ-IFAFERALKK-HGINVTIRREHGHDIDAACGQ 354
Query: 1149 L 1151
L
Sbjct: 355 L 355
>sp|Q8R9T4|RLMN_THETN Ribosomal RNA large subunit methyltransferase N
OS=Thermoanaerobacter tengcongensis GN=rlmN PE=3 SV=1
Length = 342
Score = 178 bits (451), Expect = 9e-044
Identities = 97/237 (40%), Positives = 154/237 (64%), Gaps = 6/237 (2%)
Frame = +3
Query: 450 STLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQLVHA-SRLADIRNIVFMGMGEPL 626
+T C+S+QVGC M C FCA+ G +L + E+V+Q++ S I NIV MG GEP
Sbjct: 101 NTACVSTQVGCNMKCKFCASAIGGKVRDLKASEMVDQVMAIDSDYGKISNIVLMGSGEPF 160
Query: 627 NNYNAVVEAVRAMLKQPF--QLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAPVQE 800
+NY+ V++ ++ ++ P+ ++ + ITISTVG+V I + ++ ++L++SLHAP E
Sbjct: 161 DNYDEVMKFIK-IVNNPYGLKIGKRHITISTVGIVPKIYQFADEELQVNLSISLHAPNNE 219
Query: 801 IRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLKTFQ 980
+R ++MP RA+PL++LM A + + + + ++I EY ++DGVND++E+A+QL +LLK
Sbjct: 220 LRNELMPINRAYPLEELMKACRYYIEKTNRRITFEYALIDGVNDKKEHAYQLVDLLKGML 279
Query: 981 VVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQL 1151
+NLIP N + F+ S + V F+KI+ E I TVR+E+G DI ACGQL
Sbjct: 280 CHVNLIPINYVKEIG-FRKSNNEKVMMFKKII-ENAGITCTVRRELGSDIEAACGQL 334
>sp|A9KK15|CFR_CLOPH Ribosomal RNA large subunit methyltransferase cfr
OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=cfr PE=3 SV=1
Length = 344
Score = 178 bits (449), Expect = 1e-043
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 23/285 (8%)
Frame = +3
Query: 324 SDGTTSKLLIKLQNGAFVEAVIMRYDTRLGMCGGKPRPGGVRSTLCISSQVGCKMGCTFC 503
+ G K+L L +G VE V + Y + CISSQ GC GC FC
Sbjct: 70 TSGQADKILFSLPDGNRVETVNLHYKKGW-------------ESFCISSQCGCGFGCQFC 116
Query: 504 ATGSMGFKSNLTSGEIVEQLVHASRLA-DIRNIVFMGMGEPLNNYNAVVEAVRAMLKQP- 677
ATG++G K N+T+ EI +QL++ + +I FMGMGEPL N N + +A+ +
Sbjct: 117 ATGTLGHKRNMTADEITDQLLYFHLNGHKLNSISFMGMGEPLANPN-LFDALNILNDSSL 175
Query: 678 FQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAPVQEIRCQIMPAARAFPLQKLMD 857
F LS +RITIST+G++ I +L ++ P I+LA SLH+P + R ++MP R+FPL ++M+
Sbjct: 176 FGLSQRRITISTIGIIPGIKRLTHEFPQINLAYSLHSPFENQRSELMPVNRSFPLHEVMN 235
Query: 858 ALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLK-----TFQVVINLIPFNPIGST 1022
AL + + +++F+ YIML+GVND ++A L ELL+ ++LIP+N T
Sbjct: 236 ALDNHIRHTGRRLFLAYIMLNGVNDSVDHAKALVELLQDRGPWAHLYHVDLIPYNATDKT 295
Query: 1023 -SQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQLV 1154
+F +S K ++ F+ IL I R + G DIS ACGQL+
Sbjct: 296 PRKFASSDKITMKRFRDILHAN-GISVATRTQFGSDISAACGQLL 339
>sp|Q8EVK0|RLMN_MYCPE Ribosomal RNA large subunit methyltransferase N
OS=Mycoplasma penetrans GN=rlmN PE=3 SV=1
Length = 352
Score = 178 bits (449), Expect = 1e-043
Identities = 98/286 (34%), Positives = 170/286 (59%), Gaps = 26/286 (9%)
Frame = +3
Query: 327 DGTTSKLLIKLQNGAFVEAVIMRYDTRLGMCGGKPRPGGVRSTLCISSQVGCKMGCTFCA 506
DGT K L+KL++G F+E VIM+++ ++C++SQ+GC M C FCA
Sbjct: 77 DGTV-KFLLKLEDGNFIETVIMKFN--------------YGYSVCVTSQIGCNMACKFCA 121
Query: 507 TGSMGFKSNLTSGEIVEQLVHASRLAD------IRNIVFMGMGEPLNNYNAVVEAVRAML 668
+G + K N+T GE ++Q + A + + ++V MG+GEP +N+ +++ +
Sbjct: 122 SGLIRKKRNITVGEFIKQFIIAKEYVEKNFNDKLTHMVVMGIGEPFDNFENLIQFFEVIK 181
Query: 669 KQP-FQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHAPVQEIRCQIMPAARAFPLQ 845
+Q +SP++IT+ST G+V I + + ++LA+ LHAP EIR +IMP + + L
Sbjct: 182 QQKGLCISPRKITVSTCGLVEKIKEFADLKNQVNLAILLHAPNNEIRNKIMPINKVYSLD 241
Query: 846 KLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELLKTFQVVINLIPFNPIGSTS 1025
K+++A+ + K +++++ IEYI++ VND +ENA +L +LLK +NLIP+N + +
Sbjct: 242 KVIEAMDYYIKVTKRRVTIEYILIKDVNDSDENAVELAKLLKGKLCYVNLIPYNKVVENN 301
Query: 1026 QFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQLVVNQ 1163
F++ + F +L++ NI+ T+R E G I ACGQL + +
Sbjct: 302 YFRSVRGK---QFFDVLKKN-NIQATIRLERGSSIDAACGQLRIKK 343
>sp|Q8DG98|RLMN_THEEB Ribosomal RNA large subunit methyltransferase N
OS=Thermosynechococcus elongatus (strain BP-1) GN=rlmN PE=3 SV=1
Length = 337
Score = 177 bits (448), Expect = 2e-043
Identities = 96/241 (39%), Positives = 149/241 (61%), Gaps = 5/241 (2%)
Frame = +3
Query: 435 PGGVRSTLCISSQVGCKMGCTFCATGSMGFKSNLTSGEIVEQL--VHASRLADIRNIVFM 608
P R T+C+SSQVGC M C FCATG G++ NL EI++Q+ + + + ++VFM
Sbjct: 93 PSSDRLTVCVSSQVGCPMACDFCATGKGGYRRNLACHEILDQVLTIQSEMGRRVSHVVFM 152
Query: 609 GMGEPLNNYNAVVEAVRAMLKQPFQLSPKRITISTVGVVHAINKLHNDLPGISLAVSLHA 788
GMGEPL N AV++A+ L + + + ITISTVG+ I +L +LAVSLHA
Sbjct: 153 GMGEPLLNLPAVLQAI-TCLNRDIGIGQRHITISTVGIPQQIQRLAQHQLQTTLAVSLHA 211
Query: 789 PVQEIRCQIMPAARAFPLQKLMDALQAFQKSSQQKIFIEYIMLDGVNDQEENAHQLGELL 968
P Q +R Q++P+A+ +PL +L+ +A+ + + ++I EY +L GVND+ ++A +L +LL
Sbjct: 212 PNQALREQLIPSAKHYPLSQLIADCRAYVQQTGRRITFEYTVLAGVNDRPQHAEELAQLL 271
Query: 969 KTFQVVINLIPFNPIGSTSQFKTSTKQSVSSFQKILRETYNIRTTVRKEMGQDISGACGQ 1148
+ FQ +NLIP+NPI + ++ T Q + F L + + ++R+ G D ACGQ
Sbjct: 272 RGFQSHVNLIPYNPIAEAA-YQRPTDQHLRQFLSQL-QALGVTASIRRSRGLDRQAACGQ 329
Query: 1149 L 1151
L
Sbjct: 330 L 330
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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