BLASTX 7.6.2
Query= UN21824 /QuerySize=1096
(1095 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76400.1 | Symbols: | ribophorin I family pro... 470 1e-132
TAIR9_protein||AT2G01720.1 | Symbols: | ribophorin I family pro... 121 1e-027
>TAIR9_protein||AT1G76400.1 | Symbols: | ribophorin I family protein |
chr1:28658713-28661672 REVERSE
Length = 615
Score = 470 bits (1207), Expect = 1e-132
Identities = 244/275 (88%), Positives = 256/275 (93%), Gaps = 1/275 (0%)
Frame = -1
Query: 954 LFVCIGRETFPRHPFGSPMLDLVTEKLIVQVVLPEGSKDISVTTPFAVKQSHEIKYSHLD 775
LF G+ F FGSP+LDLVTEKLIVQVVLPEGSKDISVTTPFAVKQS EIKYSHLD
Sbjct: 342 LFASEGKR-FLNISFGSPILDLVTEKLIVQVVLPEGSKDISVTTPFAVKQSQEIKYSHLD 400
Query: 774 IAGRPVVVLEKNNVVPDHNQNIQVYYKFSNINLLSEPLMLITGFFVLFITCIIYTRADFS 595
IAGRPVVVLEKNNVVPDHNQ+IQVYYKFSNINLLSEPLMLI+GFF+LFITCIIYTRAD S
Sbjct: 401 IAGRPVVVLEKNNVVPDHNQHIQVYYKFSNINLLSEPLMLISGFFILFITCIIYTRADIS 460
Query: 594 ISKSSAAYLAKLQWDEVLATVQEVQNIIQKCLAAHDKLEASLRDLSRTGDIQTCKAARKS 415
ISKSS +YLAKLQWDEVLAT+QEVQ+I+QKCLA HDKLEASLRDLSRTGDIQTCKAARKS
Sbjct: 461 ISKSSPSYLAKLQWDEVLATLQEVQSIVQKCLATHDKLEASLRDLSRTGDIQTCKAARKS 520
Query: 414 TDSSLKDLSKELRPLLASLQSFPSASQISPKVEELVAKERELQEKLMAKHTTVVEGYEKK 235
TDS LKDLSKEL+PLL LQSFPSAS ISPKVEELV KE+ELQEKLMAKHTTVVEGYEKK
Sbjct: 521 TDSLLKDLSKELKPLLGFLQSFPSASHISPKVEELVVKEKELQEKLMAKHTTVVEGYEKK 580
Query: 234 SSGRDIENRIASQQQKIIALRQEVEDLLEFIDEI* 130
SSGRDIENRIASQQQKIIALRQE+EDLLEFIDEI*
Sbjct: 581 SSGRDIENRIASQQQKIIALRQEIEDLLEFIDEI* 615
Score = 124 bits (309), Expect = 2e-028
Identities = 60/78 (76%), Positives = 67/78 (85%)
Frame = -2
Query: 1094 RDDIGNISTSQMKSDSKKTELLIEPRFPLFGGWKTFFTIGYGLPLSDFLFASEGKRFLDI 915
RDDIGNISTS+MKSDSKKTELLIEPRFPLFGGWKTFFTIGYGLPL+DFLFASEGKRFL+I
Sbjct: 294 RDDIGNISTSEMKSDSKKTELLIEPRFPLFGGWKTFFTIGYGLPLTDFLFASEGKRFLNI 353
Query: 914 PLAPLCLTLSLKNLLYRL 861
L L + L+ ++
Sbjct: 354 SFGSPILDLVTEKLIVQV 371
>TAIR9_protein||AT2G01720.1 | Symbols: | ribophorin I family protein |
chr2:317193-320016 REVERSE
Length = 465
Score = 121 bits (302), Expect = 1e-027
Identities = 55/107 (51%), Positives = 75/107 (70%)
Frame = -1
Query: 912 FGSPMLDLVTEKLIVQVVLPEGSKDISVTTPFAVKQSHEIKYSHLDIAGRPVVVLEKNNV 733
FG P+++ + KL ++VVLPEGSKD S PF V Q ++KYS+LDI GR VVVL+K+NV
Sbjct: 355 FGCPLVETIVNKLTIKVVLPEGSKDPSAVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNV 414
Query: 732 VPDHNQNIQVYYKFSNINLLSEPLMLITGFFVLFITCIIYTRADFSI 592
VP HN QVYY F I +L+EP ML++ FF++F+ + Y D +I
Sbjct: 415 VPTHNVPFQVYYTFKPIYMLAEPFMLVSAFFLVFVASLAYVHIDLNI 461
Score = 78 bits (191), Expect = 8e-015
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -2
Query: 1094 RDDIGNISTSQMKSDSKKTELLIEPRFPLFGGWKTFFTIGYGLPLSDFLF-ASEGKRFLD 918
RD+IGNISTS +++ +K+EL EPR+PLFGGW F IGY +PL D+LF AS+G+R+L+
Sbjct: 293 RDEIGNISTSHLRTGFRKSELEFEPRYPLFGGWSATFIIGYRVPLEDYLFEASDGRRYLN 352
Query: 917 IPL-APLCLTL 888
PL T+
Sbjct: 353 FTFGCPLVETI 363
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,346,610,772
Number of Sequences: 33410
Number of Extensions: 11346610772
Number of Successful Extensions: 370295973
Number of sequences better than 0.0: 0
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