BLASTX 7.6.2
Query= UN21874 /QuerySize=1369
(1368 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297837401|ref|XP_002886582.1| ATRPAC42 [Arabidopsis lyrata su... 611 9e-173
gi|15219820|ref|NP_176282.1| DNA-directed RNA polymerase subunit... 599 6e-169
gi|514322|gb|AAB00528.1| RNA polymerase subunit [Arabidopsis tha... 597 2e-168
gi|21592304|gb|AAM64255.1| RNA polymerase subunit [Arabidopsis t... 593 3e-167
gi|297840495|ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata su... 556 3e-156
gi|15219773|ref|NP_176261.1| RNA polymerase I subunit 43 [Arabid... 555 8e-156
gi|225461965|ref|XP_002270559.1| PREDICTED: hypothetical protein... 506 4e-141
gi|255563568|ref|XP_002522786.1| DNA-directed RNA polymerase I/I... 499 7e-139
gi|255637183|gb|ACU18922.1| unknown [Glycine max] 473 4e-131
gi|224061238|ref|XP_002300385.1| predicted protein [Populus tric... 461 1e-127
gi|42571933|ref|NP_974057.1| DNA-directed RNA polymerase subunit... 436 4e-120
gi|242064360|ref|XP_002453469.1| hypothetical protein SORBIDRAFT... 426 4e-117
gi|115452445|ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japo... 423 4e-116
gi|212276110|ref|NP_001130839.1| hypothetical protein LOC1001919... 414 2e-113
gi|108707637|gb|ABF95432.1| RNA polymerase Rpb3/Rpb11 dimerisati... 362 1e-097
gi|218191485|gb|EEC73912.1| hypothetical protein OsI_08749 [Oryz... 323 5e-086
gi|298708063|emb|CBJ30416.1| conserved unknown protein [Ectocarp... 264 3e-068
gi|297599856|ref|NP_001047973.2| Os02g0723600 [Oryza sativa Japo... 230 6e-058
>gi|297837401|ref|XP_002886582.1| ATRPAC42 [Arabidopsis lyrata subsp. lyrata]
Length = 376
Score = 611 bits (1575), Expect = 9e-173
Identities = 310/378 (82%), Positives = 339/378 (89%), Gaps = 4/378 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVP GLPPHLK +Q VVS + + + T+ IYSGSYVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPTGLPPHLKAQQTGVVS-NNNAPLHTASAIYSGSYVSSL 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
GVD++VKLGNFYE+FKVDVIS T+TDMEFDMIGIDAAFANAFRRILIAE+PSMAIEKVLI
Sbjct: 60 GVDDSVKLGNFYENFKVDVISLTKTDMEFDMIGIDAAFANAFRRILIAELPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+ENDQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSENDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSEFL+ESG STSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSEFLRESGG--STSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLVK CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVKVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG GRKRATVAQPR CTLC+EC+RD DLV+ VDL SV+NHFIF IESTGSL PDVL
Sbjct: 298 DIEDMGKGRKRATVAQPRKCTLCQECVRDDDLVERVDLGSVRNHFIFNIESTGSLTPDVL 357
Query: 1173 FTEAVKILEDKCERVIAD 1226
FTEAVKILE KCE VIAD
Sbjct: 358 FTEAVKILEAKCETVIAD 375
>gi|15219820|ref|NP_176282.1| DNA-directed RNA polymerase subunit [Arabidopsis
thaliana]
Length = 375
Score = 599 bits (1542), Expect = 6e-169
Identities = 302/375 (80%), Positives = 332/375 (88%), Gaps = 4/375 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVKNHFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 1173 FTEAVKILEDKCERV 1217
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>gi|514322|gb|AAB00528.1| RNA polymerase subunit [Arabidopsis thaliana]
Length = 375
Score = 597 bits (1537), Expect = 2e-168
Identities = 301/375 (80%), Positives = 331/375 (88%), Gaps = 4/375 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKN IVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNNIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVKNHFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 1173 FTEAVKILEDKCERV 1217
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>gi|21592304|gb|AAM64255.1| RNA polymerase subunit [Arabidopsis thaliana]
Length = 375
Score = 593 bits (1528), Expect = 3e-167
Identities = 300/375 (80%), Positives = 330/375 (88%), Gaps = 4/375 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKV I
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVFI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSK +TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKLKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVKNHFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 1173 FTEAVKILEDKCERV 1217
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>gi|297840495|ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
Length = 385
Score = 556 bits (1432), Expect = 3e-156
Identities = 284/380 (74%), Positives = 317/380 (83%), Gaps = 4/380 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSG 275
+VT E+K FAKNF I DLPDVP GLPPHL+L++ R V K D + TS V+YSG+Y S G
Sbjct: 9 IVTDEEKQFAKNFNIFDLPDVPTGLPPHLELQRTRAVCKNDAPIHPTS-VLYSGAYASMG 67
Query: 276 VDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIA 455
VDN+V+L NF EDFKVDVIS TET M FDMIG+ A ANAFRRIL+AE+PSMAIEKV +A
Sbjct: 68 VDNSVRLENFSEDFKVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVA 127
Query: 456 YNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVL 635
NTS+I DEVLAHR+GLIPIAADPRLFEYL+ENDQPNEKNTIVFKLHVKCPKG R VL
Sbjct: 128 NNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVL 187
Query: 636 TNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLS 815
T+EL+WLPNGSE +KESG T+KP+TYTSFS SQDS P FA NPITPS DILI+KL
Sbjct: 188 TSELKWLPNGSELVKESGG--LTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLG 245
Query: 816 PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFD 995
PGQEIELEAHAVKGIGKTHAKWSPV TAWYRMLPEV+LL E E + AE LVK CP VFD
Sbjct: 246 PGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFD 305
Query: 996 IEDMGNGRKRATVAQPRNCTLCKECIRDH-DLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
IEDMG GRKRATVA+PR+C+LC+ECIR+ + VDLR VKNHFIF IESTGS PPDVL
Sbjct: 306 IEDMGQGRKRATVARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVL 365
Query: 1173 FTEAVKILEDKCERVIADLS 1232
F EAVKILEDKCERVI++LS
Sbjct: 366 FNEAVKILEDKCERVISELS 385
>gi|15219773|ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis
thaliana]
Length = 385
Score = 555 bits (1429), Expect = 8e-156
Identities = 283/380 (74%), Positives = 322/380 (84%), Gaps = 4/380 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSG 275
+VT E+K AKNF I DLPDVP GLPPHL+L++ RVV KKD+++ T+ + +SG+Y S G
Sbjct: 9 IVTDEEKREAKNFNIFDLPDVPTGLPPHLELQRTRVVCKKDSNIHPTA-ITFSGAYSSMG 67
Query: 276 VDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIA 455
VDN+V+L NF EDFKVDVIS TETDM FDMIG+ A ANAFRRIL+AE+PSMAIEKV +A
Sbjct: 68 VDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVA 127
Query: 456 YNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVL 635
NTS+I DEVLAHR+GLIPIAADPRLFEYL+ENDQPNEKNTIVFKLHVKC KG R VL
Sbjct: 128 NNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKVL 187
Query: 636 TNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLS 815
T+EL+WLPNGSE +KESG ST+T P+TYTSF+ SQDS PEFA+NPI P+ DILI+KL
Sbjct: 188 TSELKWLPNGSELIKESGGSTTT--PKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKLG 245
Query: 816 PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFD 995
PGQEIELEAHAVKGIGKTHAKWSPV TAWYRMLPEVVLL E E + AE LVK CP VFD
Sbjct: 246 PGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVFD 305
Query: 996 IEDMGNGRKRATVAQPRNCTLCKECIRDH-DLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
IEDMG GRKRATVA+PR+C+LC+ECIRD + D VDLR VKNHFIF IESTGS PP+VL
Sbjct: 306 IEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVL 365
Query: 1173 FTEAVKILEDKCERVIADLS 1232
F EAVKILEDKCERVI++LS
Sbjct: 366 FNEAVKILEDKCERVISELS 385
>gi|225461965|ref|XP_002270559.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 372
Score = 506 bits (1302), Expect = 4e-141
Identities = 253/366 (69%), Positives = 302/366 (82%), Gaps = 4/366 (1%)
Frame = +3
Query: 144 DLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFK 320
D+PDVP G LPPH++L++ RV+ D + T +V YSG+Y S GVDN++++ F +F+
Sbjct: 8 DMPDVPKGQLPPHIELQRTRVLCNFD-APTHTENVQYSGAYSSMGVDNSLRMDQFCNNFR 66
Query: 321 VDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRI 500
V+VI +E DMEFDMIGID + ANAFRRILIAE+P+MAIEKVLIA NTS++ DEVLAHR+
Sbjct: 67 VEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHRL 126
Query: 501 GLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEF-- 674
GLIPI ADPRLF+ L+END PNEKNTIVF LHV+C +G RL V +NEL+WLP+GSEF
Sbjct: 127 GLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEFPL 186
Query: 675 LKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVK 854
E+ S+STSKP+TYTSFSCSQDSLPEF+D I P H DI+I+KL PGQEIELEAHAVK
Sbjct: 187 ATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHAVK 246
Query: 855 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 1034
G+GKTHAKWSPV TAWYRMLPEVVLL E+EDEKAE LVK CP+NVFDIED+ G+K+ATV
Sbjct: 247 GMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKATV 306
Query: 1035 AQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
A+PR CTLC+ECIR D V +R VKNHFIF IESTG+LPP+VLF EAVK+LEDKCER
Sbjct: 307 ARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKCER 366
Query: 1215 VIADLS 1232
VI +LS
Sbjct: 367 VITELS 372
>gi|255563568|ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits,
putative [Ricinus communis]
Length = 374
Score = 499 bits (1283), Expect = 7e-139
Identities = 254/377 (67%), Positives = 304/377 (80%), Gaps = 8/377 (2%)
Frame = +3
Query: 105 QEDKIFAKNFCIDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVD 281
QE+K K F I DLPDVP G LPPHL+L++ RVV K D + + T +++YSG+Y S GVD
Sbjct: 5 QENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSD-APIHTDNIVYSGAYASIGVD 63
Query: 282 NTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYN 461
N+++L F ++FKV+VI T+ DMEFDMIGIDAA ANAFRRILI+E+P+MAIEKVLIA N
Sbjct: 64 NSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANN 123
Query: 462 TSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTN 641
TSLI DEVLAHR+GLIPI ADPRLFEYL+ ND PNEKNTIVFKLH C +G+ R V +
Sbjct: 124 TSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSE 183
Query: 642 ELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPG 821
EL+WLP GS+ LKES + SKP TYTSF+ QD +P+ P++PS I+++KL PG
Sbjct: 184 ELKWLPGGSQLLKES--EKADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPG 237
Query: 822 QEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIE 1001
QEIELEAHAVKG+GKTHAKWSPV TAWYRMLPEVVLL ++EDE AE L K CP+NVFDIE
Sbjct: 238 QEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIE 297
Query: 1002 DMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTE 1181
D+GNG+KRATVA+PR CTLC+ECIR + V LR VK+HFIF IESTG+LPP+VLFTE
Sbjct: 298 DIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTE 357
Query: 1182 AVKILEDKCERVIADLS 1232
AVK+LEDKCERVI +LS
Sbjct: 358 AVKVLEDKCERVITELS 374
>gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 473 bits (1216), Expect = 4e-131
Identities = 244/365 (66%), Positives = 293/365 (80%), Gaps = 5/365 (1%)
Frame = +3
Query: 147 LPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVD 326
L +VP+ LPPHL+L + RV+ D + V T V YSG+Y GVDN+V+L +F E+FKV+
Sbjct: 26 LDNVPSKLPPHLELFKTRVLCNND-APVHTDTVQYSGAYAILGVDNSVRLDSFCENFKVE 84
Query: 327 VISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGL 506
V T++D+EFDMIGID A ANAFRRILIAEVP+MAIE+V IA NTS++ DEVL+HR+GL
Sbjct: 85 VKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRLGL 144
Query: 507 IPIAADPRLFEYLTEN--DQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLK 680
IPI ADPRLFEY EN D NEKNTIVFKLHV+C GQ R+ V +++L+WLPNGSE
Sbjct: 145 IPIRADPRLFEY-PENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELPC 203
Query: 681 ESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGI 860
E + SKP+T+TSF+CSQDSLPEF++N I ++ DI+++KL PGQEIELEAHAVKGI
Sbjct: 204 EGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKGI 263
Query: 861 GKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQ 1040
GKTHAKWSPV TAWYRMLPEVVLL VEDE AE L CP+NVFDIED+G G++RA VA+
Sbjct: 264 GKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVAR 323
Query: 1041 PRNCTLCKECIR-DHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCERV 1217
PR+CTLC+ECIR + D V LR VKNHFIF IESTG+LPP+VLFTEAVKILEDKCERV
Sbjct: 324 PRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERV 383
Query: 1218 IADLS 1232
I +LS
Sbjct: 384 ITELS 388
>gi|224061238|ref|XP_002300385.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 461 bits (1186), Expect = 1e-127
Identities = 240/376 (63%), Positives = 285/376 (75%), Gaps = 6/376 (1%)
Frame = +3
Query: 105 QEDKIFAKNFCIDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVD 281
+E + + F +L DV G LPPH++ + RV K D + +T + YSGSY S GVD
Sbjct: 17 EEQQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPD-APTNTETLQYSGSYASMGVD 75
Query: 282 NTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYN 461
N+++L +F E+F++ VI+ + MEFDMIGIDAA ANAFRRILI+EVP+MAIEKV IA N
Sbjct: 76 NSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANN 135
Query: 462 TSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTN 641
TS+I DEVLAHR+GLIPI DPRLFEYL+ ND PNEKNTIV KLH +C +GQ R V +
Sbjct: 136 TSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQ 195
Query: 642 ELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPG 821
EL+WLPNGSEF KES SKP TYTSFSC QDSLPEFA NPI+ DI+++KL PG
Sbjct: 196 ELKWLPNGSEFAKES--EKPDSKPSTYTSFSCGQDSLPEFAGNPISTVE-DIILAKLGPG 252
Query: 822 QEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIE 1001
QEIELEAHAVKG+GKTHAKWSPVGTAWYRM PEVVLL ++ E AE L++ CP VFDIE
Sbjct: 253 QEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDIE 312
Query: 1002 DMGNGRKRATVAQPRNCTLCKECIR-DHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFT 1178
D GN +K+A VA R CTLC+ECIR D + V L VK+HFIF IESTG+LPP+VLFT
Sbjct: 313 DTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFT 372
Query: 1179 EAVKILEDKCERVIAD 1226
EAVKILE KCERVI +
Sbjct: 373 EAVKILEAKCERVITE 388
>gi|42571933|ref|NP_974057.1| DNA-directed RNA polymerase subunit [Arabidopsis
thaliana]
Length = 302
Score = 436 bits (1121), Expect = 4e-120
Identities = 221/277 (79%), Positives = 247/277 (89%), Gaps = 4/277 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEV 923
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEV
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEV 274
>gi|242064360|ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420
[Sorghum bicolor]
Length = 370
Score = 426 bits (1095), Expect = 4e-117
Identities = 213/362 (58%), Positives = 278/362 (76%), Gaps = 7/362 (1%)
Frame = +3
Query: 138 IDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYED 314
+D+ P+ LP +L++++ RVV D + + T YSG++ + GVDN+V + F ++
Sbjct: 11 VDNAPNQQENKLPDYLEVQRTRVVCNAD-APIHTQGYQYSGTFAAMGVDNSVSVEKFCKN 69
Query: 315 FKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAH 494
FK+++ TE DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEK+ + NTS+I DEVL+H
Sbjct: 70 FKIEINRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADEVLSH 129
Query: 495 RIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEF 674
R+GLIP+ ADPRLF+Y++END PNE+NT+V+KLHV CPKG R+ V ++EL+WLP GS+
Sbjct: 130 RLGLIPLRADPRLFDYISENDVPNERNTVVYKLHVSCPKGSQRITVKSSELEWLPEGSQ- 188
Query: 675 LKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVK 854
L + + S K +T+TSFS SQ E + P+ DI I++L PGQ IELEAHAVK
Sbjct: 189 LSMAAPAQSGDKQKTFTSFSQSQ---KEILEEPLGVKFKDITIARLGPGQAIELEAHAVK 245
Query: 855 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 1034
G+GK HAKWSPV TAWYRMLPEVV+L ++E + AE LVK CP+NVFDIED+GNG KRA V
Sbjct: 246 GVGKVHAKWSPVATAWYRMLPEVVILKDIEGDDAEELVKKCPVNVFDIEDLGNGGKRAVV 305
Query: 1035 AQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
A+PR CTLC+EC+ + + V+LR V++HFIF IESTG+LPP+VLFTEAVKILE+KCER
Sbjct: 306 AKPRACTLCRECVMGPN-GNQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCER 364
Query: 1215 VI 1220
VI
Sbjct: 365 VI 366
>gi|115452445|ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group]
Length = 379
Score = 423 bits (1087), Expect = 4e-116
Identities = 218/361 (60%), Positives = 273/361 (75%), Gaps = 11/361 (3%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G++ + G+DN+V F ++FKV V TE
Sbjct: 24 LPEHLEVQRTRVVCKGD-APVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEKVL+A NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 83 DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
RLFEY++END P E+NTIV+KLHV C KG RL V + +L+WLP GS+ L + + S
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQ-LPLASPAQSGD 201
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSP 887
K +TYTSFS SQ + E P+ DI I++L PGQ IELE HAVKGIGK HAKWSP
Sbjct: 202 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWSP 258
Query: 888 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKE 1067
V TAWYRMLPEVVL E++D AE LV CP+NVFDIED+GNG KRA VA+PR CTLC++
Sbjct: 259 VATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQ 318
Query: 1068 CIRD------HDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCERVIADL 1229
C+ V+ V+LR V++HFIF IESTG+LPP++LFTEAV+ILE+KCERVI++L
Sbjct: 319 CVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLFTEAVRILEEKCERVISEL 378
Query: 1230 S 1232
S
Sbjct: 379 S 379
>gi|212276110|ref|NP_001130839.1| hypothetical protein LOC100191943 [Zea mays]
Length = 372
Score = 414 bits (1064), Expect = 2e-113
Identities = 212/362 (58%), Positives = 271/362 (74%), Gaps = 7/362 (1%)
Frame = +3
Query: 138 IDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYED 314
+DD+P+ LP +L+L++ RVV D + + T YSG++ + G+DN+V + F ++
Sbjct: 13 VDDVPNEQENKLPDYLELQRTRVVCNAD-APIHTQGFQYSGAFAAMGIDNSVSVDKFCKN 71
Query: 315 FKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAH 494
FK+++ TE MEFDMIGIDA+ ANAFRRILI+EVP+MAIEKV +A N S+I DEVL+H
Sbjct: 72 FKIEINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVIADEVLSH 131
Query: 495 RIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEF 674
R+GLIP+ ADPRLFEY++END PNE+NTIV+KLHV CPK R+ V ++EL+WLP GS+
Sbjct: 132 RLGLIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSSELEWLPEGSQ- 190
Query: 675 LKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVK 854
L S + S K +T+TSFS SQ E + P+ + DI I++L PGQ IELEAHAVK
Sbjct: 191 LSMSAPAQSGDKQKTFTSFSQSQ---KEILEKPLGVKYKDITIARLGPGQAIELEAHAVK 247
Query: 855 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 1034
G G HAKWSPV TAWYRMLPEVV+L EVE +AE LV C +NVFDIED+ NG KRA V
Sbjct: 248 GTGNVHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLANGGKRAVV 307
Query: 1035 AQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
A+PR CTLC+EC+ + V+LR V++HFIF IESTGS+PP+VLFTEAVKILE+KC R
Sbjct: 308 ARPRACTLCRECVMGPN-EKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKILEEKCAR 366
Query: 1215 VI 1220
VI
Sbjct: 367 VI 368
>gi|108707637|gb|ABF95432.1| RNA polymerase Rpb3/Rpb11 dimerisation domain
containing protein, expressed [Oryza sativa Japonica Group]
Length = 352
Score = 362 bits (928), Expect = 1e-097
Identities = 184/302 (60%), Positives = 228/302 (75%), Gaps = 5/302 (1%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G++ + G+DN+V F ++FKV V TE
Sbjct: 24 LPEHLEVQRTRVVCKGD-APVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEKVL+A NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 83 DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
RLFEY++END P E+NTIV+KLHV C KG RL V + +L+WLP GS+ L + + S
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQ-LPLASPAQSGD 201
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSP 887
K +TYTSFS SQ + E P+ DI I++L PGQ IELE HAVKGIGK HAKWSP
Sbjct: 202 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWSP 258
Query: 888 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKE 1067
V TAWYRMLPEVVL E++D AE LV CP+NVFDIED+GNG KRA VA+PR CTLC++
Sbjct: 259 VATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQ 318
Query: 1068 CI 1073
C+
Sbjct: 319 CV 320
>gi|218191485|gb|EEC73912.1| hypothetical protein OsI_08749 [Oryza sativa Indica
Group]
Length = 332
Score = 323 bits (827), Expect = 5e-086
Identities = 166/292 (56%), Positives = 211/292 (72%), Gaps = 5/292 (1%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G+Y + G+DN+V F ++FKV++ TE
Sbjct: 22 LPEHLEVQRTRVVCKAD-APVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAE+P+MAIEKVL+ NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
R FEY++END PNE+NTIV+KLHV C KG RL V + +L+WLP GS L + + S
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSR-LPLASPAQSRY 199
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSP 887
K +TYTSFS SQ + E P+ DI I++L PGQ I LE H VKG+GK HAKWSP
Sbjct: 200 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIVLEVHGVKGMGKVHAKWSP 256
Query: 888 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQP 1043
V TAWYRM PEVV E++ + AE+LVK CP+NVFDIED+GN +T P
Sbjct: 257 VATAWYRMFPEVVFRKEIKGDNAEKLVKKCPVNVFDIEDLGNVTIESTGGLP 308
>gi|298708063|emb|CBJ30416.1| conserved unknown protein [Ectocarpus
siliculosus]
Length = 361
Score = 264 bits (674), Expect = 3e-068
Identities = 145/305 (47%), Positives = 192/305 (62%), Gaps = 25/305 (8%)
Frame = +3
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
++ FD++G+DA+ ANA RRIL+AEV ++AIE V + N+S+I DE+LAHR+GLIPI A+P
Sbjct: 57 ELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANP 116
Query: 528 RLFEYL----TENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDS 695
R+FE++ E D+P E NT VFKL VK P P +G S
Sbjct: 117 RMFEFVGEEGGEQDEPTEFNTCVFKLEVKNPAD--------------PADMPDPMPTGTS 162
Query: 696 TSTSKPRTYTSFSCSQDSLPE-------FADNPITPSHLDILISKLSPGQEIELEAHAVK 854
+ RT FS + + P + + P H DILI+KL PGQEI E H K
Sbjct: 163 YAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRK 222
Query: 855 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 1034
GIGK HAK+SPV TA YR+LP V L EVE ++AE LV CP+NVFDIED+G KRA V
Sbjct: 223 GIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKV 282
Query: 1035 AQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
A+PR+CT+C+ECIR+ D V L V +HFIF IES G LPP L +++++L KC+
Sbjct: 283 ARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPKELLKDSIQVLRQKCDS 342
Query: 1215 VIADL 1229
+IA++
Sbjct: 343 MIAEV 347
>gi|297599856|ref|NP_001047973.2| Os02g0723600 [Oryza sativa Japonica Group]
Length = 300
Score = 230 bits (585), Expect = 6e-058
Identities = 121/221 (54%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G+Y + G+DN+V F ++FKV++ TE
Sbjct: 22 LPEHLEVQRTRVVCKAD-APVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAE+P+MAIEKVL+ NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
R FEY++END PNE+NTIV+KLHV C KG RL V + +L+WLP GS L + + S
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSR-LPLASPAQSRY 199
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEI 830
K +TYTSFS SQ + E P+ DI I++L PGQ +
Sbjct: 200 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQVV 237
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,672,520,567,077
Number of Sequences: 15229318
Number of Extensions: 2672520567077
Number of Successful Extensions: 649898909
Number of sequences better than 0.0: 0
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