BLASTX 7.6.2
Query= UN21874 /QuerySize=1369
(1368 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9C6C2|Q9C6C2_ARATH RNA polymerase subunit OS=Arabidopsis tha... 599 4e-169
tr|Q39215|Q39215_ARATH RNA polymerase subunit OS=Arabidopsis tha... 597 2e-168
tr|Q8LD68|Q8LD68_ARATH RNA polymerase subunit OS=Arabidopsis tha... 593 2e-167
tr|Q39216|Q39216_ARATH RNA polymerase subunit OS=Arabidopsis tha... 555 5e-156
tr|B9S9W7|B9S9W7_RICCO DNA-directed RNA polymerase I/III subunit... 499 5e-139
tr|C6TAS0|C6TAS0_SOYBN Putative uncharacterized protein OS=Glyci... 473 3e-131
tr|B9GFY9|B9GFY9_POPTR Predicted protein OS=Populus trichocarpa ... 461 8e-128
tr|Q3ECL4|Q3ECL4_ARATH Putative uncharacterized protein At1g6085... 436 3e-120
tr|C5XXF5|C5XXF5_SORBI Putative uncharacterized protein Sb04g006... 429 4e-118
tr|Q10MU2|Q10MU2_ORYSJ Os03g0295400 protein OS=Oryza sativa subs... 423 2e-116
tr|B4FAR4|B4FAR4_MAIZE Putative uncharacterized protein OS=Zea m... 417 2e-114
tr|A9T5P0|A9T5P0_PHYPA Predicted protein OS=Physcomitrella paten... 371 1e-100
tr|Q10MU3|Q10MU3_ORYSJ RNA polymerase Rpb3/Rpb11 dimerisation do... 362 7e-098
tr|B8AHP1|B8AHP1_ORYSI Putative uncharacterized protein OS=Oryza... 323 3e-086
tr|Q6Z5L9|Q6Z5L9_ORYSJ Os02g0723600 protein OS=Oryza sativa subs... 230 4e-058
tr|B7Q825|B7Q825_IXOSC Transferase, putative OS=Ixodes scapulari... 153 5e-035
tr|O08521|O08521_CRIGR Homologous to 40kD subunit of RNA-polymer... 152 1e-034
>tr|Q9C6C2|Q9C6C2_ARATH RNA polymerase subunit OS=Arabidopsis thaliana
GN=At1g60850 PE=2 SV=1
Length = 375
Score = 599 bits (1542), Expect = 4e-169
Identities = 302/375 (80%), Positives = 332/375 (88%), Gaps = 4/375 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVKNHFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 1173 FTEAVKILEDKCERV 1217
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>tr|Q39215|Q39215_ARATH RNA polymerase subunit OS=Arabidopsis thaliana PE=2
SV=1
Length = 375
Score = 597 bits (1537), Expect = 2e-168
Identities = 301/375 (80%), Positives = 331/375 (88%), Gaps = 4/375 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKN IVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNNIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVKNHFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 1173 FTEAVKILEDKCERV 1217
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>tr|Q8LD68|Q8LD68_ARATH RNA polymerase subunit OS=Arabidopsis thaliana PE=2
SV=1
Length = 375
Score = 593 bits (1528), Expect = 2e-167
Identities = 300/375 (80%), Positives = 330/375 (88%), Gaps = 4/375 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKV I
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVFI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSK +TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKLKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVF 992
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEVVL GEVEDE AERLV CP NVF
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVF 297
Query: 993 DIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
DIEDMG G+KRATVAQPR CTLCKEC+RD DLVD VDL SVKNHFIF IESTGSLPP+VL
Sbjct: 298 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 357
Query: 1173 FTEAVKILEDKCERV 1217
FTEAVKILE KCE +
Sbjct: 358 FTEAVKILEAKCEAI 372
>tr|Q39216|Q39216_ARATH RNA polymerase subunit OS=Arabidopsis thaliana
GN=F8A5.14 PE=2 SV=1
Length = 385
Score = 555 bits (1429), Expect = 5e-156
Identities = 283/380 (74%), Positives = 322/380 (84%), Gaps = 4/380 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSG 275
+VT E+K AKNF I DLPDVP GLPPHL+L++ RVV KKD+++ T+ + +SG+Y S G
Sbjct: 9 IVTDEEKREAKNFNIFDLPDVPTGLPPHLELQRTRVVCKKDSNIHPTA-ITFSGAYSSMG 67
Query: 276 VDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIA 455
VDN+V+L NF EDFKVDVIS TETDM FDMIG+ A ANAFRRIL+AE+PSMAIEKV +A
Sbjct: 68 VDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVA 127
Query: 456 YNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVL 635
NTS+I DEVLAHR+GLIPIAADPRLFEYL+ENDQPNEKNTIVFKLHVKC KG R VL
Sbjct: 128 NNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKVL 187
Query: 636 TNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLS 815
T+EL+WLPNGSE +KESG ST+T P+TYTSF+ SQDS PEFA+NPI P+ DILI+KL
Sbjct: 188 TSELKWLPNGSELIKESGGSTTT--PKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKLG 245
Query: 816 PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFD 995
PGQEIELEAHAVKGIGKTHAKWSPV TAWYRMLPEVVLL E E + AE LVK CP VFD
Sbjct: 246 PGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVFD 305
Query: 996 IEDMGNGRKRATVAQPRNCTLCKECIRDH-DLVDLVDLRSVKNHFIFKIESTGSLPPDVL 1172
IEDMG GRKRATVA+PR+C+LC+ECIRD + D VDLR VKNHFIF IESTGS PP+VL
Sbjct: 306 IEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVL 365
Query: 1173 FTEAVKILEDKCERVIADLS 1232
F EAVKILEDKCERVI++LS
Sbjct: 366 FNEAVKILEDKCERVISELS 385
>tr|B9S9W7|B9S9W7_RICCO DNA-directed RNA polymerase I/III subunits, putative
OS=Ricinus communis GN=RCOM_0523110 PE=4 SV=1
Length = 374
Score = 499 bits (1283), Expect = 5e-139
Identities = 254/377 (67%), Positives = 304/377 (80%), Gaps = 8/377 (2%)
Frame = +3
Query: 105 QEDKIFAKNFCIDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVD 281
QE+K K F I DLPDVP G LPPHL+L++ RVV K D + + T +++YSG+Y S GVD
Sbjct: 5 QENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSD-APIHTDNIVYSGAYASIGVD 63
Query: 282 NTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYN 461
N+++L F ++FKV+VI T+ DMEFDMIGIDAA ANAFRRILI+E+P+MAIEKVLIA N
Sbjct: 64 NSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANN 123
Query: 462 TSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTN 641
TSLI DEVLAHR+GLIPI ADPRLFEYL+ ND PNEKNTIVFKLH C +G+ R V +
Sbjct: 124 TSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSE 183
Query: 642 ELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPG 821
EL+WLP GS+ LKES + SKP TYTSF+ QD +P+ P++PS I+++KL PG
Sbjct: 184 ELKWLPGGSQLLKES--EKADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPG 237
Query: 822 QEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIE 1001
QEIELEAHAVKG+GKTHAKWSPV TAWYRMLPEVVLL ++EDE AE L K CP+NVFDIE
Sbjct: 238 QEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIE 297
Query: 1002 DMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTE 1181
D+GNG+KRATVA+PR CTLC+ECIR + V LR VK+HFIF IESTG+LPP+VLFTE
Sbjct: 298 DIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTE 357
Query: 1182 AVKILEDKCERVIADLS 1232
AVK+LEDKCERVI +LS
Sbjct: 358 AVKVLEDKCERVITELS 374
>tr|C6TAS0|C6TAS0_SOYBN Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 388
Score = 473 bits (1216), Expect = 3e-131
Identities = 244/365 (66%), Positives = 293/365 (80%), Gaps = 5/365 (1%)
Frame = +3
Query: 147 LPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVD 326
L +VP+ LPPHL+L + RV+ D + V T V YSG+Y GVDN+V+L +F E+FKV+
Sbjct: 26 LDNVPSKLPPHLELFKTRVLCNND-APVHTDTVQYSGAYAILGVDNSVRLDSFCENFKVE 84
Query: 327 VISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGL 506
V T++D+EFDMIGID A ANAFRRILIAEVP+MAIE+V IA NTS++ DEVL+HR+GL
Sbjct: 85 VKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRLGL 144
Query: 507 IPIAADPRLFEYLTEN--DQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLK 680
IPI ADPRLFEY EN D NEKNTIVFKLHV+C GQ R+ V +++L+WLPNGSE
Sbjct: 145 IPIRADPRLFEY-PENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELPC 203
Query: 681 ESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGI 860
E + SKP+T+TSF+CSQDSLPEF++N I ++ DI+++KL PGQEIELEAHAVKGI
Sbjct: 204 EGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKGI 263
Query: 861 GKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQ 1040
GKTHAKWSPV TAWYRMLPEVVLL VEDE AE L CP+NVFDIED+G G++RA VA+
Sbjct: 264 GKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVAR 323
Query: 1041 PRNCTLCKECIR-DHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCERV 1217
PR+CTLC+ECIR + D V LR VKNHFIF IESTG+LPP+VLFTEAVKILEDKCERV
Sbjct: 324 PRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERV 383
Query: 1218 IADLS 1232
I +LS
Sbjct: 384 ITELS 388
>tr|B9GFY9|B9GFY9_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_550226 PE=4 SV=1
Length = 390
Score = 461 bits (1186), Expect = 8e-128
Identities = 240/376 (63%), Positives = 285/376 (75%), Gaps = 6/376 (1%)
Frame = +3
Query: 105 QEDKIFAKNFCIDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVD 281
+E + + F +L DV G LPPH++ + RV K D + +T + YSGSY S GVD
Sbjct: 17 EEQQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPD-APTNTETLQYSGSYASMGVD 75
Query: 282 NTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYN 461
N+++L +F E+F++ VI+ + MEFDMIGIDAA ANAFRRILI+EVP+MAIEKV IA N
Sbjct: 76 NSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANN 135
Query: 462 TSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTN 641
TS+I DEVLAHR+GLIPI DPRLFEYL+ ND PNEKNTIV KLH +C +GQ R V +
Sbjct: 136 TSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQ 195
Query: 642 ELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPG 821
EL+WLPNGSEF KES SKP TYTSFSC QDSLPEFA NPI+ DI+++KL PG
Sbjct: 196 ELKWLPNGSEFAKES--EKPDSKPSTYTSFSCGQDSLPEFAGNPISTVE-DIILAKLGPG 252
Query: 822 QEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIE 1001
QEIELEAHAVKG+GKTHAKWSPVGTAWYRM PEVVLL ++ E AE L++ CP VFDIE
Sbjct: 253 QEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDIE 312
Query: 1002 DMGNGRKRATVAQPRNCTLCKECIR-DHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFT 1178
D GN +K+A VA R CTLC+ECIR D + V L VK+HFIF IESTG+LPP+VLFT
Sbjct: 313 DTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFT 372
Query: 1179 EAVKILEDKCERVIAD 1226
EAVKILE KCERVI +
Sbjct: 373 EAVKILEAKCERVITE 388
>tr|Q3ECL4|Q3ECL4_ARATH Putative uncharacterized protein At1g60850.3
OS=Arabidopsis thaliana GN=At1g60850 PE=4 SV=1
Length = 302
Score = 436 bits (1121), Expect = 3e-120
Identities = 221/277 (79%), Positives = 247/277 (89%), Gaps = 4/277 (1%)
Frame = +3
Query: 96 MVTQEDKIFAKNFCIDDLPDVPAGLPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSS- 272
MVT+ +K FAKNF IDDLPDVPAGLPPHLK +Q RVVS K+ + T+ IYSG+YVSS
Sbjct: 1 MVTKAEKQFAKNFNIDDLPDVPAGLPPHLKAQQTRVVS-KNNAPAHTASAIYSGTYVSST 59
Query: 273 GVDNTVKLGNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 452
D+ VKLGNFY++FKVDV+S T+TDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI
Sbjct: 60 EEDDNVKLGNFYDNFKVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLI 119
Query: 453 AYNTSLIVDEVLAHRIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHV 632
AYNTS+I+DEVLAHR+GLIPIAADPRLFEYL+E+DQ NEKNTIVFKLHVKCPK + RL V
Sbjct: 120 AYNTSVIIDEVLAHRMGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKV 179
Query: 633 LTNELQWLPNGSEFLKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKL 812
LT++L+WLPNGSE L+ES TSKP+TYTSFSCSQDSLPEFA+NPITP LDILI+KL
Sbjct: 180 LTSDLKWLPNGSELLRES--ENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKL 237
Query: 813 SPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEV 923
+PGQEIELEAHAVKGIGKTHAKWSPVGTAWYRM PEV
Sbjct: 238 APGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMHPEV 274
>tr|C5XXF5|C5XXF5_SORBI Putative uncharacterized protein Sb04g006420 OS=Sorghum
bicolor GN=Sb04g006420 PE=4 SV=1
Length = 370
Score = 429 bits (1102), Expect = 4e-118
Identities = 214/365 (58%), Positives = 281/365 (76%), Gaps = 7/365 (1%)
Frame = +3
Query: 138 IDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYED 314
+D+ P+ LP +L++++ RVV D + + T YSG++ + GVDN+V + F ++
Sbjct: 11 VDNAPNQQENKLPDYLEVQRTRVVCNAD-APIHTQGYQYSGTFAAMGVDNSVSVEKFCKN 69
Query: 315 FKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAH 494
FK+++ TE DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEK+ + NTS+I DEVL+H
Sbjct: 70 FKIEINRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADEVLSH 129
Query: 495 RIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEF 674
R+GLIP+ ADPRLF+Y++END PNE+NT+V+KLHV CPKG R+ V ++EL+WLP GS+
Sbjct: 130 RLGLIPLRADPRLFDYISENDVPNERNTVVYKLHVSCPKGSQRITVKSSELEWLPEGSQ- 188
Query: 675 LKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVK 854
L + + S K +T+TSFS SQ E + P+ DI I++L PGQ IELEAHAVK
Sbjct: 189 LSMAAPAQSGDKQKTFTSFSQSQ---KEILEEPLGVKFKDITIARLGPGQAIELEAHAVK 245
Query: 855 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 1034
G+GK HAKWSPV TAWYRMLPEVV+L ++E + AE LVK CP+NVFDIED+GNG KRA V
Sbjct: 246 GVGKVHAKWSPVATAWYRMLPEVVILKDIEGDDAEELVKKCPVNVFDIEDLGNGGKRAVV 305
Query: 1035 AQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
A+PR CTLC+EC+ + + V+LR V++HFIF IESTG+LPP+VLFTEAVKILE+KCER
Sbjct: 306 AKPRACTLCRECVMGPN-GNQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCER 364
Query: 1215 VIADL 1229
VI++L
Sbjct: 365 VISEL 369
>tr|Q10MU2|Q10MU2_ORYSJ Os03g0295400 protein OS=Oryza sativa subsp. japonica
GN=Os03g0295400 PE=4 SV=1
Length = 379
Score = 423 bits (1087), Expect = 2e-116
Identities = 218/361 (60%), Positives = 273/361 (75%), Gaps = 11/361 (3%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G++ + G+DN+V F ++FKV V TE
Sbjct: 24 LPEHLEVQRTRVVCKGD-APVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEKVL+A NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 83 DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
RLFEY++END P E+NTIV+KLHV C KG RL V + +L+WLP GS+ L + + S
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQ-LPLASPAQSGD 201
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSP 887
K +TYTSFS SQ + E P+ DI I++L PGQ IELE HAVKGIGK HAKWSP
Sbjct: 202 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWSP 258
Query: 888 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKE 1067
V TAWYRMLPEVVL E++D AE LV CP+NVFDIED+GNG KRA VA+PR CTLC++
Sbjct: 259 VATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQ 318
Query: 1068 CIRD------HDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCERVIADL 1229
C+ V+ V+LR V++HFIF IESTG+LPP++LFTEAV+ILE+KCERVI++L
Sbjct: 319 CVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLFTEAVRILEEKCERVISEL 378
Query: 1230 S 1232
S
Sbjct: 379 S 379
>tr|B4FAR4|B4FAR4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 372
Score = 417 bits (1071), Expect = 2e-114
Identities = 213/365 (58%), Positives = 274/365 (75%), Gaps = 7/365 (1%)
Frame = +3
Query: 138 IDDLPDVPAG-LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYED 314
+DD+P+ LP +L+L++ RVV D + + T YSG++ + G+DN+V + F ++
Sbjct: 13 VDDVPNEQENKLPDYLELQRTRVVCNAD-APIHTQGFQYSGAFAAMGIDNSVSVDKFCKN 71
Query: 315 FKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAH 494
FK+++ TE MEFDMIGIDA+ ANAFRRILI+EVP+MAIEKV +A N S+I DEVL+H
Sbjct: 72 FKIEINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVIADEVLSH 131
Query: 495 RIGLIPIAADPRLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEF 674
R+GLIP+ ADPRLFEY++END PNE+NTIV+KLHV CPK R+ V ++EL+WLP GS+
Sbjct: 132 RLGLIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSSELEWLPEGSQ- 190
Query: 675 LKESGDSTSTSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVK 854
L S + S K +T+TSFS SQ E + P+ + DI I++L PGQ IELEAHAVK
Sbjct: 191 LSMSAPAQSGDKQKTFTSFSQSQ---KEILEKPLGVKYKDITIARLGPGQAIELEAHAVK 247
Query: 855 GIGKTHAKWSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATV 1034
G G HAKWSPV TAWYRMLPEVV+L EVE +AE LV C +NVFDIED+ NG KRA V
Sbjct: 248 GTGNVHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLANGGKRAVV 307
Query: 1035 AQPRNCTLCKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
A+PR CTLC+EC+ + V+LR V++HFIF IESTGS+PP+VLFTEAVKILE+KC R
Sbjct: 308 ARPRACTLCRECVMGPN-EKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKILEEKCAR 366
Query: 1215 VIADL 1229
VI++L
Sbjct: 367 VISEL 371
>tr|A9T5P0|A9T5P0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_107528 PE=4 SV=1
Length = 360
Score = 371 bits (951), Expect = 1e-100
Identities = 195/352 (55%), Positives = 254/352 (72%), Gaps = 13/352 (3%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LPPHL+L++ RVV D T V YSG+Y++ GVDN++++ +F ++ +V++IS E
Sbjct: 13 LPPHLELQRTRVVCAPDAPSY-TESVQYSGAYMAYGVDNSLRIEDFCKNLRVEIISMNEE 71
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
D+EFD++GIDAA ANAFRRILIAEVP+MAIEKV IA NTS+I DEVLAHR+GL+PI ADP
Sbjct: 72 DIEFDIVGIDAAIANAFRRILIAEVPTMAIEKVYIANNTSVIQDEVLAHRLGLLPIKADP 131
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRL---HVLTNELQWLPNGSEFLKESGDST 698
RLF+Y +E + NEKNTIVFK+ V C + R+ V +++++WLP GSE +T
Sbjct: 132 RLFDYKSEEENANEKNTIVFKIDVVCTRKGERVLNSSVTSDQMKWLPEGSEM----PFNT 187
Query: 699 STSKPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAK 878
T +TSF SQ +LP I+ + DI+++KL PGQ IELE HA+KG G HAK
Sbjct: 188 MTK----FTSFGSSQKNLPGLPAEGISCQYPDIIVAKLRPGQAIELEGHAIKGSGNIHAK 243
Query: 879 WSPVGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTL 1058
WSPV TA YRMLPEV L+ +++ + AE LV+ CP VFDIED+G K+A VA+PRNCTL
Sbjct: 244 WSPVATARYRMLPEVNLMEDIQGKLAEELVQKCPTGVFDIEDVGT-VKKAIVARPRNCTL 302
Query: 1059 CKECIRDHDLVDLVDLRSVKNHFIFKIESTGSLPPDVLFTEAVKILEDKCER 1214
C+EC+R D V L VK+HFIF IESTG+L P+VLFTEA+KIL +KC R
Sbjct: 303 CRECVRGTDWDKRVQLTRVKDHFIFTIESTGALRPEVLFTEAIKILNEKCHR 354
>tr|Q10MU3|Q10MU3_ORYSJ RNA polymerase Rpb3/Rpb11 dimerisation domain containing
protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g18410
PE=4 SV=1
Length = 352
Score = 362 bits (928), Expect = 7e-098
Identities = 184/302 (60%), Positives = 228/302 (75%), Gaps = 5/302 (1%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G++ + G+DN+V F ++FKV V TE
Sbjct: 24 LPEHLEVQRTRVVCKGD-APVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAEVP+MAIEKVL+A NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 83 DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
RLFEY++END P E+NTIV+KLHV C KG RL V + +L+WLP GS+ L + + S
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQ-LPLASPAQSGD 201
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSP 887
K +TYTSFS SQ + E P+ DI I++L PGQ IELE HAVKGIGK HAKWSP
Sbjct: 202 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWSP 258
Query: 888 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKE 1067
V TAWYRMLPEVVL E++D AE LV CP+NVFDIED+GNG KRA VA+PR CTLC++
Sbjct: 259 VATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQ 318
Query: 1068 CI 1073
C+
Sbjct: 319 CV 320
>tr|B8AHP1|B8AHP1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_08749 PE=4 SV=1
Length = 332
Score = 323 bits (827), Expect = 3e-086
Identities = 166/292 (56%), Positives = 211/292 (72%), Gaps = 5/292 (1%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G+Y + G+DN+V F ++FKV++ TE
Sbjct: 22 LPEHLEVQRTRVVCKAD-APVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAE+P+MAIEKVL+ NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
R FEY++END PNE+NTIV+KLHV C KG RL V + +L+WLP GS L + + S
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSR-LPLASPAQSRY 199
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSP 887
K +TYTSFS SQ + E P+ DI I++L PGQ I LE H VKG+GK HAKWSP
Sbjct: 200 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIVLEVHGVKGMGKVHAKWSP 256
Query: 888 VGTAWYRMLPEVVLLGEVEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQP 1043
V TAWYRM PEVV E++ + AE+LVK CP+NVFDIED+GN +T P
Sbjct: 257 VATAWYRMFPEVVFRKEIKGDNAEKLVKKCPVNVFDIEDLGNVTIESTGGLP 308
>tr|Q6Z5L9|Q6Z5L9_ORYSJ Os02g0723600 protein OS=Oryza sativa subsp. japonica
GN=P0685G12.18 PE=4 SV=1
Length = 300
Score = 230 bits (585), Expect = 4e-058
Identities = 121/221 (54%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Frame = +3
Query: 168 LPPHLKLKQNRVVSKKDTSVVDTSDVIYSGSYVSSGVDNTVKLGNFYEDFKVDVISCTET 347
LP HL++++ RVV K D + V+T Y+G+Y + G+DN+V F ++FKV++ TE
Sbjct: 22 LPEHLEVQRTRVVCKAD-APVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 348 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSLIVDEVLAHRIGLIPIAADP 527
DMEFDMIGIDA+ ANAFRRILIAE+P+MAIEKVL+ NTS+I DEVL+HR+GLIP+ ADP
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140
Query: 528 RLFEYLTENDQPNEKNTIVFKLHVKCPKGQSRLHVLTNELQWLPNGSEFLKESGDSTSTS 707
R FEY++END PNE+NTIV+KLHV C KG RL V + +L+WLP GS L + + S
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSR-LPLASPAQSRY 199
Query: 708 KPRTYTSFSCSQDSLPEFADNPITPSHLDILISKLSPGQEI 830
K +TYTSFS SQ + E P+ DI I++L PGQ +
Sbjct: 200 KQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQVV 237
>tr|B7Q825|B7Q825_IXOSC Transferase, putative OS=Ixodes scapularis
GN=IscW_ISCW011293 PE=4 SV=1
Length = 344
Score = 153 bits (386), Expect = 5e-035
Identities = 76/157 (48%), Positives = 107/157 (68%)
Frame = +3
Query: 759 FADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGE 938
F + P P + DI+++KL PGQEI+L+ H +KG G+ HAK+SPV TA YR+LPE+VLL E
Sbjct: 181 FGNKPPKPVYDDIILAKLRPGQEIDLKLHCMKGTGQDHAKFSPVATASYRLLPEIVLLRE 240
Query: 939 VEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVK 1118
V DE+AERL V ++++ +G K A VA R T + + DL D V+L VK
Sbjct: 241 VRDEQAERLQGCFAKGVIELDETDDGHKVARVANARADTCSRNVFQYDDLKDAVELTRVK 300
Query: 1119 NHFIFKIESTGSLPPDVLFTEAVKILEDKCERVIADL 1229
+HFIF +ESTG+ PPD+L TEA+K+L KC+ +++L
Sbjct: 301 DHFIFSVESTGAYPPDLLVTEAIKVLMAKCQAFLSEL 337
>tr|O08521|O08521_CRIGR Homologous to 40kD subunit of RNA-polymerase I and III
(Fragment) OS=Cricetulus griseus PE=2 SV=1
Length = 347
Score = 152 bits (383), Expect = 1e-034
Identities = 73/157 (46%), Positives = 108/157 (68%)
Frame = +3
Query: 759 FADNPITPSHLDILISKLSPGQEIELEAHAVKGIGKTHAKWSPVGTAWYRMLPEVVLLGE 938
FADNPI + DI+++KL PGQEI+LEAHA+ GIG+ HAK+SPV TA YR+LP + +L
Sbjct: 185 FADNPIRVVNPDIVVAKLRPGQEIDLEAHAILGIGQDHAKFSPVATASYRLLPTIHILSP 244
Query: 939 VEDEKAERLVKTCPMNVFDIEDMGNGRKRATVAQPRNCTLCKECIRDHDLVDLVDLRSVK 1118
+E E A + K P V ++E+ +G+K+A VA R T+ +EC+R + D V L V+
Sbjct: 245 IEGEDAVKFQKCFPKGVIELEEGPDGKKQARVADVRKDTVSRECLRHPEFADKVQLGRVR 304
Query: 1119 NHFIFKIESTGSLPPDVLFTEAVKILEDKCERVIADL 1229
+H++F +ESTG + PDVLF +++ +L+ KC V + L
Sbjct: 305 DHYLFSVESTGIMKPDVLFIKSIAVLKSKCLAVKSSL 341
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,838,413,532,843
Number of Sequences: 11397958
Number of Extensions: 1838413532843
Number of Successful Extensions: 658680295
Number of sequences better than 0.0: 0
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