BLASTX 7.6.2
Query= UN21938 /QuerySize=1854
(1853 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G04940.1 | Symbols: TIC20 | TIC20 (TRANSLOCON ... 477 1e-134
TAIR9_protein||AT4G03320.1 | Symbols: tic20-IV | tic20-IV (TRANS... 171 2e-042
TAIR9_protein||AT1G04950.1 | Symbols: TAFII59, TAF6, ATTAF6 | TA... 150 3e-036
TAIR9_protein||AT1G04950.2 | Symbols: TAFII59 | TAF6 (TBP-ASSOCI... 150 3e-036
TAIR9_protein||AT1G04950.3 | Symbols: TAFII59 | TAF6 (TBP-ASSOCI... 150 3e-036
TAIR9_protein||AT1G54360.1 | Symbols: TAF6B1, TAF6B | TAF6B4 (TB... 86 9e-017
TAIR9_protein||AT1G54360.2 | Symbols: TAF6B | TAF6B4 (TBP-ASSOCI... 86 9e-017
TAIR9_protein||AT1G54360.3 | Symbols: TAF6B2, TAF6B | TAF6B4 (TB... 86 9e-017
TAIR9_protein||AT1G54360.4 | Symbols: TAF6B4, TAF6B | TAF6B4 (TB... 86 9e-017
>TAIR9_protein||AT1G04940.1 | Symbols: TIC20 | TIC20 (TRANSLOCON AT THE INNER
ENVELOPE MEMBRANE OF CHLOROPLASTS 20) | chr1:1399588-1400616 FORWARD
Length = 275
Score = 477 bits (1227), Expect = 1e-134
Identities = 234/278 (84%), Positives = 247/278 (88%), Gaps = 8/278 (2%)
Frame = -2
Query: 1738 MISGCSTVTSHALTSSWGFKPSSYRATTTSGQSQRCLASSSLSVIKNS-----LPFNGLQ 1574
MI+G ST ++H L SS FK SSYRA +GQ+Q LA SSL V+KNS PFN L
Sbjct: 1 MITGYSTPSAHVLMSSRAFKSSSYRA--AAGQTQHYLARSSLPVVKNSWGSPPSPFNEL- 57
Query: 1573 ASVQRGVPLSYLSASSSRLLSGEQGSLFGALPVLPVRRKTLLSPRASKDVPSSFRFPPMT 1394
V RGVPLSYLSASSS LL+GEQGSL G LPVLPVRRKTLL+PRASKDVPSSFRFPPMT
Sbjct: 58 PRVSRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMT 117
Query: 1393 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLSALGKLPGWFLMA 1214
KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFL A+G+LP WFLMA
Sbjct: 118 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMA 177
Query: 1213 YFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVVGTVSKWMPLGLYWGKFGMHFWTAV 1034
YFFVAYLG+VRRKEWPHFFRFHVVMGMLLEIALQV+GTVSKWMPLG+YWGKFGMHFWTAV
Sbjct: 178 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 237
Query: 1033 AFAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD* 920
AFAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD*
Sbjct: 238 AFAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD* 275
>TAIR9_protein||AT4G03320.1 | Symbols: tic20-IV | tic20-IV (TRANSLOCON AT THE
INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV) | chr4:1464529-1465820
FORWARD
Length = 285
Score = 171 bits (432), Expect = 2e-042
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Frame = -2
Query: 1618 SLSVIKNSLPFNGLQASVQRGVPLSYLSASSSRLLSGEQGSLFGALPVLPVRRKTLLSPR 1439
S S I P S V + + SS++L + L P L R+ + R
Sbjct: 48 SASSISRRCPREIAPLSATASVDFAAAATSSNQLFA---NGLPPLAPGLRRHRRPIEPAR 104
Query: 1438 ASKDVPSSFRFPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEF---L 1268
+KD + P + ++P+WWWRTLAC+PYL+ L ++ +++ PFLE + +
Sbjct: 105 VAKDDFFKIKLPKIAERPEWWWRTLACVPYLISL----QISDVGFYVQPFLEKHDAIGDM 160
Query: 1267 TYPFLSALGKLPGWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVVGTVSKW 1088
Y A+ + P WF M Y ++ Y+ VV+ KE PH+ RFH++MGMLLE ALQV+ S +
Sbjct: 161 IYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLETALQVIWCTSNF 220
Query: 1087 MPLGLYWGKFGMHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 938
PL + G+FGM++W A+ F Y+ +LE IRCALAG+YA IPF+ DAA I
Sbjct: 221 FPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAASI 270
>TAIR9_protein||AT1G04950.1 | Symbols: TAFII59, TAF6, ATTAF6 | TAF6
(TBP-ASSOCIATED FACTOR 6); DNA binding / RNA polymerase II
transcription factor/ transcription initiation factor |
chr1:1403606-1407184 REVERSE
Length = 550
Score = 150 bits (378), Expect = 3e-036
Identities = 79/113 (69%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
L NLEPYLSLLEPEL+AEKQKNQMK YEAWRVYGALLRA+GLCIH RLKIFP LPSPSPS
Sbjct: 345 LSNLEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPS 404
Query: 250 FLN--KGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQNSVQPSSSGQA 402
FL+ KGKGKII+T+P+KRKLSVDSS K + + P SG A
Sbjct: 405 FLHKGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSA 457
Score = 146 bits (366), Expect = 8e-035
Identities = 73/95 (76%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
Frame = +1
Query: 319 SSTMQVDKPMGDDNPPQNSVQPSSSGQASD-GAPESRNAKEKEGSKGRAITMKAILDQVW 495
S+ MQVD P+ +DNPPQNSVQPSSS QASD ESRN K KE + RAITMKAILDQ+W
Sbjct: 456 SAPMQVDNPVENDNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIW 515
Query: 496 KNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLFL* 600
K+DLDSGRLLVKLH+LYGDRILPFIPSTEMS+FL*
Sbjct: 516 KDDLDSGRLLVKLHELYGDRILPFIPSTEMSVFL* 550
>TAIR9_protein||AT1G04950.2 | Symbols: TAFII59 | TAF6 (TBP-ASSOCIATED FACTOR 6);
DNA binding / RNA polymerase II transcription factor/ transcription
initiation factor | chr1:1403606-1407184 REVERSE
Length = 550
Score = 150 bits (378), Expect = 3e-036
Identities = 79/113 (69%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
L NLEPYLSLLEPEL+AEKQKNQMK YEAWRVYGALLRA+GLCIH RLKIFP LPSPSPS
Sbjct: 345 LSNLEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPS 404
Query: 250 FLN--KGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQNSVQPSSSGQA 402
FL+ KGKGKII+T+P+KRKLSVDSS K + + P SG A
Sbjct: 405 FLHKGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSA 457
Score = 146 bits (366), Expect = 8e-035
Identities = 73/95 (76%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
Frame = +1
Query: 319 SSTMQVDKPMGDDNPPQNSVQPSSSGQASD-GAPESRNAKEKEGSKGRAITMKAILDQVW 495
S+ MQVD P+ +DNPPQNSVQPSSS QASD ESRN K KE + RAITMKAILDQ+W
Sbjct: 456 SAPMQVDNPVENDNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIW 515
Query: 496 KNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLFL* 600
K+DLDSGRLLVKLH+LYGDRILPFIPSTEMS+FL*
Sbjct: 516 KDDLDSGRLLVKLHELYGDRILPFIPSTEMSVFL* 550
>TAIR9_protein||AT1G04950.3 | Symbols: TAFII59 | TAF6 (TBP-ASSOCIATED FACTOR 6);
DNA binding / RNA polymerase II transcription factor/ transcription
initiation factor | chr1:1403606-1407184 REVERSE
Length = 550
Score = 150 bits (378), Expect = 3e-036
Identities = 79/113 (69%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
L NLEPYLSLLEPEL+AEKQKNQMK YEAWRVYGALLRA+GLCIH RLKIFP LPSPSPS
Sbjct: 345 LSNLEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPS 404
Query: 250 FLN--KGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQNSVQPSSSGQA 402
FL+ KGKGKII+T+P+KRKLSVDSS K + + P SG A
Sbjct: 405 FLHKGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSA 457
Score = 146 bits (366), Expect = 8e-035
Identities = 73/95 (76%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
Frame = +1
Query: 319 SSTMQVDKPMGDDNPPQNSVQPSSSGQASD-GAPESRNAKEKEGSKGRAITMKAILDQVW 495
S+ MQVD P+ +DNPPQNSVQPSSS QASD ESRN K KE + RAITMKAILDQ+W
Sbjct: 456 SAPMQVDNPVENDNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIW 515
Query: 496 KNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLFL* 600
K+DLDSGRLLVKLH+LYGDRILPFIPSTEMS+FL*
Sbjct: 516 KDDLDSGRLLVKLHELYGDRILPFIPSTEMSVFL* 550
>TAIR9_protein||AT1G54360.1 | Symbols: TAF6B1, TAF6B | TAF6B4 (TBP-ASSOCIATED
FACTOR 6B4); RNA polymerase II transcription factor/ transcription
initiation factor | chr1:20290838-20293160 FORWARD
Length = 448
Score = 86 bits (210), Expect = 9e-017
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
LPNL PYL LL PE+ EKQK + K + AW VYGAL+ A+G C+++RLK L SP S
Sbjct: 275 LPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTS 334
Query: 250 FLNKGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQ-NSVQPSSSGQASDGAPESR 426
+ K GK+ + +KRK S D+ + K + Q +S Q G +
Sbjct: 335 SVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQMQMRGTTTVPQQSHT 394
Query: 427 NAKEKEGSKGRAITMKAILDQVWKNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLF 594
+A + + I K D+D+ L L + +G+ +L F P+ E+S F
Sbjct: 395 DADARHHNSPSTIAPKT--SAAAGTDVDN--YLFPLFEYFGESMLMFTPTHELSFF 446
>TAIR9_protein||AT1G54360.2 | Symbols: TAF6B | TAF6B4 (TBP-ASSOCIATED FACTOR
6B4); RNA polymerase II transcription factor/ transcription initiation
factor | chr1:20290838-20293160 FORWARD
Length = 448
Score = 86 bits (210), Expect = 9e-017
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
LPNL PYL LL PE+ EKQK + K + AW VYGAL+ A+G C+++RLK L SP S
Sbjct: 275 LPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTS 334
Query: 250 FLNKGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQ-NSVQPSSSGQASDGAPESR 426
+ K GK+ + +KRK S D+ + K + Q +S Q G +
Sbjct: 335 SVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQMQMRGTTTVPQQSHT 394
Query: 427 NAKEKEGSKGRAITMKAILDQVWKNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLF 594
+A + + I K D+D+ L L + +G+ +L F P+ E+S F
Sbjct: 395 DADARHHNSPSTIAPKT--SAAAGTDVDN--YLFPLFEYFGESMLMFTPTHELSFF 446
>TAIR9_protein||AT1G54360.3 | Symbols: TAF6B2, TAF6B | TAF6B4 (TBP-ASSOCIATED
FACTOR 6B4); RNA polymerase II transcription factor/ transcription
initiation factor | chr1:20290838-20293160 FORWARD
Length = 441
Score = 86 bits (210), Expect = 9e-017
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
LPNL PYL LL PE+ EKQK + K + AW VYGAL+ A+G C+++RLK L SP S
Sbjct: 268 LPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTS 327
Query: 250 FLNKGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQ-NSVQPSSSGQASDGAPESR 426
+ K GK+ + +KRK S D+ + K + Q +S Q G +
Sbjct: 328 SVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQMQMRGTTTVPQQSHT 387
Query: 427 NAKEKEGSKGRAITMKAILDQVWKNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLF 594
+A + + I K D+D+ L L + +G+ +L F P+ E+S F
Sbjct: 388 DADARHHNSPSTIAPKT--SAAAGTDVDN--YLFPLFEYFGESMLMFTPTHELSFF 439
>TAIR9_protein||AT1G54360.4 | Symbols: TAF6B4, TAF6B | TAF6B4 (TBP-ASSOCIATED
FACTOR 6B4); DNA binding / RNA polymerase II transcription factor/
transcription initiation factor | chr1:20290600-20293160 FORWARD
Length = 527
Score = 86 bits (210), Expect = 9e-017
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Frame = +1
Query: 70 LPNLEPYLSLLEPELDAEKQKNQMKSYEAWRVYGALLRASGLCIHDRLKIFPYLPSPSPS 249
LPNL PYL LL PE+ EKQK + K + AW VYGAL+ A+G C+++RLK L SP S
Sbjct: 354 LPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTS 413
Query: 250 FLNKGKGKIINTEPNKRKLSVDSSSTMQVDKPMGDDNPPQ-NSVQPSSSGQASDGAPESR 426
+ K GK+ + +KRK S D+ + K + Q +S Q G +
Sbjct: 414 SVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQMQMRGTTTVPQQSHT 473
Query: 427 NAKEKEGSKGRAITMKAILDQVWKNDLDSGRLLVKLHQLYGDRILPFIPSTEMSLF 594
+A + + I K D+D+ L L + +G+ +L F P+ E+S F
Sbjct: 474 DADARHHNSPSTIAPKT--SAAAGTDVDN--YLFPLFEYFGESMLMFTPTHELSFF 525
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,391,343,013
Number of Sequences: 33410
Number of Extensions: 11391343013
Number of Successful Extensions: 370310059
Number of sequences better than 0.0: 0
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