BLASTX 7.6.2
Query= UN21965 /QuerySize=1200
(1199 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 126 5e-029
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 75 7e-014
TAIR9_protein||AT1G45100.1 | Symbols: | polyadenylate-binding p... 61 1e-009
TAIR9_protein||AT5G41690.1 | Symbols: | RNA binding / nucleic a... 56 5e-008
TAIR9_protein||AT3G57150.1 | Symbols: NAP57, AtNAP57, CBF5, AtCB... 54 2e-007
TAIR9_protein||AT3G48840.1 | Symbols: | nucleic acid binding / ... 53 4e-007
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 126 bits (314), Expect = 5e-029
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 22/186 (11%)
Frame = +2
Query: 137 SKKSKRDAEVDSDIPKDPKKQKKELIQAVEKAPPPKKKE--KKKKNKKNTNSEMVESDQK 310
SK SK+++ D + K++ K+ EK P KK + ++ +N++ ++
Sbjct: 323 SKTSKQESSSDESSDESDKEESKD-----EKVTPKKKDSDVEMVDAEQKSNAKQPKTPTN 377
Query: 311 SVAKEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAHVEFASEEAA 469
KTLF G+L +Q +SD++NFFKE GE+VDVRL+ KG+ H+EFAS E A
Sbjct: 378 QTQGGSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEA 437
Query: 470 HKALELNGKPLLGRNILLDFAKARPTSR--------PGNKVKTIFVTGFNKSVSEDDMKT 625
KALE+NGK LLGR++ LD A R T R G++ +TI+V GF+ S+ ED++K
Sbjct: 438 QKALEMNGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQSRTIYVRGFSSSLGEDEIKK 497
Query: 626 SLRKSF 643
LR F
Sbjct: 498 ELRSHF 503
Score = 118 bits (295), Expect = 8e-027
Identities = 77/198 (38%), Positives = 107/198 (54%), Gaps = 30/198 (15%)
Frame = +2
Query: 29 ARKP*NSQQSPAMAKSKKESITKVEAAAVLDSK--TKPSKKSKRDAEVDSDIPKDPKKQK 202
A+KP + + AK S + D K TK +K S + ++ +S + +
Sbjct: 281 AKKPTVVKNAKPAAKDSSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQESSSDESSDESD 340
Query: 203 KELIQAVEKAPPPKKKEKKKKNKKNTNSEMVESDQKSVAKEP-----------KTLFVGH 349
KE K EK KK+++ EMV+++QKS AK+P KTLF G+
Sbjct: 341 KE----------ESKDEKVTPKKKDSDVEMVDAEQKSNAKQPKTPTNQTQGGSKTLFAGN 390
Query: 350 LPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAHVEFASEEAAHKALELNGKPLLG 508
L +Q +SD++NFFKE GE+VDVRL+ KG+ H+EFAS E A KALE+NGK LLG
Sbjct: 391 LSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEMNGKLLLG 450
Query: 509 RNILLDFAKARPTSRPGN 562
R++ LD A R T R N
Sbjct: 451 RDVRLDLANERGTPRNSN 468
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 75 bits (183), Expect = 7e-014
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +3
Query: 639 HFGACGEIKRIFFPYYQETGDSKGVAYLDFSEDGFIKALELNGSALGGRNIVVIEARPKE 818
HF +CGEIK + P ++TG+SKG+AYL+FSE G KALELNGS +GG +V++
Sbjct: 424 HFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSE-GKEKALELNGSDMGGGFYLVVDEPRPR 482
Query: 819 KNADGNSGRGSNDDTFKRGPERGDRDSLKRGPGRGNG 929
++ G G G + F G RG RD + G G G
Sbjct: 483 GDSSGGGGFGRGNGRFGSGGGRG-RDGGRGRFGSGGG 518
Score = 64 bits (153), Expect = 2e-010
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Frame = +2
Query: 35 KP*NSQQSPAMAKSKKESITKVEAAAVLDSKTKPSKKSKRDAEVDSDIPKDPKKQKKE-L 211
KP + +PA AK+ S + E + KP++K K D + D + +E
Sbjct: 199 KPATKKAAPAAAKAASSSDSSDEDSDEESEDEKPAQK-KADTKASKKSSSDESSESEEDE 257
Query: 212 IQAVEKAPPPKKKEKKKKNKKNTNSEMVESDQKSVAKEPKTLFVGHLPFQFEKSDLKNFF 391
+ E+ P K + + + + ++++ ++ A KTLF +L F E++D++NFF
Sbjct: 258 SEDEEETPKKKSSDVEMVDAEKSSAKQPKTPSTPAAGGSKTLFAANLSFNIERADVENFF 317
Query: 392 KEVGEIVDVRLA 427
KE GE+VDVR +
Sbjct: 318 KEAGEVVDVRFS 329
Score = 54 bits (127), Expect = 2e-007
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 428 KGFAHVEFASEEAAHKALELNGKPLLGRNILLDFAKAR 541
+GF HVEFAS E A KALE +G+PLLGR I LD A+ R
Sbjct: 338 RGFGHVEFASSEEAQKALEFHGRPLLGREIRLDIAQER 375
Score = 50 bits (118), Expect = 3e-006
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +2
Query: 83 ESITKVEAAAVLDSKTKPSKKSKRDAEVDSDIPKDPKKQKKELIQAVEKAPPPKKKEKKK 262
+S TKV A TKP KK KR+ E D D KKQKK++I AV+K KK KK
Sbjct: 5 KSATKVVAEI---KATKPLKKGKREPEDDIDTKVSLKKQKKDVIAAVQKEKAVKKVPKKV 61
Query: 263 KNKKNTNSEMVESDQ 307
++ +++SE E ++
Sbjct: 62 ESSDDSDSESEEEEK 76
>TAIR9_protein||AT1G45100.1 | Symbols: | polyadenylate-binding protein,
putative / PABP, putative | chr1:17050631-17052189 FORWARD
Length = 498
Score = 61 bits (146), Expect = 1e-009
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Frame = +2
Query: 329 KTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAHVEFASEEAAHKALEL 487
KTLFV +L + SD+ NFFK+VGE+V VRL G+ VEFAS A KAL
Sbjct: 247 KTLFVANLRDSIQISDIINFFKDVGEVVHVRLIVNSQGKHAGWGFVEFASANEAEKALVK 306
Query: 488 NGKPLLGRNILLDFAKARPTSRP 556
NG+ L I LD AK P P
Sbjct: 307 NGEYLHNYKISLDGAKTAPHRPP 329
>TAIR9_protein||AT5G41690.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr5:16670126-16674189 REVERSE
Length = 568
Score = 56 bits (133), Expect = 5e-008
Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Frame = +2
Query: 245 KKEKKKKNKKNTNSEMVESDQKSVAKEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRL 424
++E ++ T E VE +V KTLFV HL + E + + NFFK+VGE+V VRL
Sbjct: 284 RRESLPIDEDETPPEFVE----AVGVRKKTLFVAHLSRKTEITHIINFFKDVGEVVHVRL 339
Query: 425 A-------KGFAHVEFASEEAAHKALEL-NGKPLLGRNILLDFAKARPTSRP 556
G A VEF S A ALE NG+ L I L+ AK P P
Sbjct: 340 ILNHTGKHVGCAFVEFGSANEAKMALETKNGEYLNDCKIFLEVAKMVPYPPP 391
Score = 55 bits (130), Expect = 1e-007
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 21/126 (16%)
Frame = +2
Query: 242 KKKEKKKKNKK-------NTNSEMVESDQ------KSVAKEPKTLFVGHLPFQFEKSDLK 382
KK KKK K + + +SDQ K A KTLFV +LP++ + ++
Sbjct: 26 KKINKKKVTTKAIAFSLQQNDLLVTKSDQANLISVKEAAVREKTLFVANLPYETKIPNII 85
Query: 383 NFFKEVGEIVDVRL-------AKGFAHVEFASEEAAHKALE-LNGKPLLGRNILLDFAKA 538
+FFK+VGE+V V+L G VEFAS A +AL+ NG+ L I LD A
Sbjct: 86 DFFKKVGEVVRVQLIVNLKGKLVGCGFVEFASVNEAEEALQKKNGECLDNNKIFLDVANK 145
Query: 539 RPTSRP 556
+ T P
Sbjct: 146 KATYLP 151
>TAIR9_protein||AT3G57150.1 | Symbols: NAP57, AtNAP57, CBF5, AtCBF5 | NAP57
(Arabidopsis thaliana homologue of NAP57); pseudouridine synthase |
chr3:21154255-21155952 REVERSE
Length = 566
Score = 54 bits (127), Expect = 2e-007
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +2
Query: 32 RKP*NSQQSPAMAKSKKESITKVEAAAVLDSKTKPSKKSKRDAEVDSD-----IPKDPKK 196
RK +S SPA +KK +VE + KK K+D E + + K+ KK
Sbjct: 442 RKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKK 501
Query: 197 QKKELIQAVEKAPPPKKKEKKKKNKKNTNSEMVESDQKSVAKEPK 331
+K + + +E+ PK ++KKKK K+T + + D+ + K K
Sbjct: 502 KKDKKEEVIEEVASPKSEKKKKKKSKDTEAAVDAEDESAAEKSEK 546
>TAIR9_protein||AT3G48840.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr3:18112721-18114070 REVERSE
Length = 190
Score = 53 bits (125), Expect = 4e-007
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Frame = +2
Query: 287 EMVESDQ-KSVAKEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAH 442
E +SD + VA KTLF+ +LP + E + NFF++VGE+V VRL G
Sbjct: 25 ETPDSDYLEEVAVRKKTLFIANLPLKSEMPHIINFFRDVGEVVSVRLIVDHRGKHVGCGF 84
Query: 443 VEFASEEAAHKA--LELNGKPLLGRNILLDFAKARP 544
VEFAS A KA + N + L R ++LD A+ P
Sbjct: 85 VEFASAYKAKKAPLEKKNLRRLRNRYVVLDVAEIAP 120
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,391,343,013
Number of Sequences: 33410
Number of Extensions: 11391343013
Number of Successful Extensions: 370310059
Number of sequences better than 0.0: 0
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