BLASTX 7.6.2
Query= UN22065 /QuerySize=1236
(1235 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 204 1e-052
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 110 3e-024
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 74 2e-013
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 66 4e-011
TAIR9_protein||AT1G45100.1 | Symbols: | polyadenylate-binding p... 59 6e-009
TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular... 53 3e-007
TAIR9_protein||AT5G41690.1 | Symbols: | RNA binding / nucleic a... 52 9e-007
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 204 bits (518), Expect = 1e-052
Identities = 116/259 (44%), Positives = 162/259 (62%), Gaps = 31/259 (11%)
Frame = +1
Query: 214 SQEAEERVDSSC*KGTTTKEKKKKKKKNKKNTNGEMVEAEQKSIAKEP-----------K 360
+ + E D S + + K +K KK+++ EMV+AEQKS AK+P K
Sbjct: 325 TSKQESSSDESSDESDKEESKDEKVTPKKKDSDVEMVDAEQKSNAKQPKTPTNQTQGGSK 384
Query: 361 TLFAGHLPFQIEKSDLEKFFKEVGEIVDVRLA-------KGFAHVEFASEEAAHKALELN 519
TLFAG+L +QI +SD+E FFKE GE+VDVRL+ KG+ H+EFAS E A KALE+N
Sbjct: 385 TLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEMN 444
Query: 520 GKPLLGRNILLDFAKARPASR--------PGNKVKTIFVTGFNKSVSEDDMKTSLRNHFG 675
GK LLGR++ LD A R R G++ +TI+V GF+ S+ ED++K LR+HF
Sbjct: 445 GKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQSRTIYVRGFSSSLGEDEIKKELRSHFS 504
Query: 676 ACGEIKRISLPYYQETGDSKGVAYLDLNEDGFNKALELNGSALGGRNIVVIEARPKEKNA 855
CGE+ R+ +P +ETG S+G AY+DL GF++AL+L+GS +GG NI V E+RP+
Sbjct: 505 KCGEVTRVHVPTDRETGASRGFAYIDLT-SGFDEALQLSGSEIGGGNIHVEESRPR---- 559
Query: 856 DGNSGRGNDTTSKRGPERG 912
D + GR ++ RG RG
Sbjct: 560 DSDEGRSSNRAPARGAPRG 578
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 110 bits (273), Expect = 3e-024
Identities = 61/125 (48%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Frame = +1
Query: 586 GNKVKTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLNED 765
G K IFV GF+ S+SEDD+K +LR HF +CGEIK +S+P ++TG+SKG+AYL+ +E
Sbjct: 397 GGDEKKIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSE- 455
Query: 766 GFNKALELNGSALGGR-NIVVIEARPK-EKNADGNSGRGNDTTSKRGPERGDGDSFKRGP 939
G KALELNGS +GG +VV E RP+ + + G GRGN G DG + G
Sbjct: 456 GKEKALELNGSDMGGGFYLVVDEPRPRGDSSGGGGFGRGNGRFGSGGGRGRDGGRGRFGS 515
Query: 940 GRGNG 954
G G G
Sbjct: 516 GGGRG 520
Score = 102 bits (252), Expect = 8e-022
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 23/169 (13%)
Frame = +1
Query: 121 QSRSSSTT*LKDEAIEEK*ERCGS*FRHPKGSQEAEERVDSSC*KGTTTKEKKKKKKKNK 300
++ SSS + +D E + E+ K S+++ S + + E++ K K
Sbjct: 211 KAASSSDSSDEDSDEESEDEKPAQKKADTKASKKSSSDESSESEEDESEDEEETPK---K 267
Query: 301 KNTNGEMVEAEQKSIAKEP-----------KTLFAGHLPFQIEKSDLEKFFKEVGEIVDV 447
K+++ EMV+AE KS AK+P KTLFA +L F IE++D+E FFKE GE+VDV
Sbjct: 268 KSSDVEMVDAE-KSSAKQPKTPSTPAAGGSKTLFAANLSFNIERADVENFFKEAGEVVDV 326
Query: 448 RLA--------KGFAHVEFASEEAAHKALELNGKPLLGRNILLDFAKAR 570
R + +GF HVEFAS E A KALE +G+PLLGR I LD A+ R
Sbjct: 327 RFSTNRDDGSFRGFGHVEFASSEEAQKALEFHGRPLLGREIRLDIAQER 375
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 74 bits (179), Expect = 2e-013
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Frame = +1
Query: 406 LEKFFKEVGEIVDV--------RLAKGFAHVEFASEEAAHKALELNGKPLLGRNILLDFA 561
L K F GEI + ++ K + + E A KAL+L+G + G +++
Sbjct: 44 LTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGGWTVIV--- 100
Query: 562 KARPASRPGNKVKTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGV 741
K +P P + + TI V G++ S+ + ++ L HF +CGEI+ + +P E G K V
Sbjct: 101 KPKPKHEPPSPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSV 160
Query: 742 AYLDLNEDGF-NKALELNGSALGGRNIVVIEARPKEKNADGNSGRGNDTT 888
A+L + +G +KAL+L+G+ + G ++V +P E D NS R TT
Sbjct: 161 AFLRIEGEGAEDKALQLSGTDVVGWTVIV---KPSEIFYD-NSSRAPATT 206
Score = 60 bits (144), Expect = 3e-009
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Frame = +1
Query: 457 KGFAHVEFASEEAAHKALELNGKPLLGRNILL-------DFAKARPASRP-GNKVKTIFV 612
K A + E A KAL+L+G ++G +++ D + PA+ P +K+ V
Sbjct: 158 KSVAFLRIEGEGAEDKALQLSGTDVVGWTVIVKPSEIFYDNSSRAPATTPEASKIHRFRV 217
Query: 613 TGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDL-NEDGFNKALEL 789
TG++ S+ E D++ +L HF +CGEI ++++ A++ L E +KALEL
Sbjct: 218 TGYDASLPEIDIQMALCKHFSSCGEIWQVTV--------LSSTAFVSLRGERCVDKALEL 269
Query: 790 NGSALGGRNIVVIE 831
+G +G R +VV E
Sbjct: 270 SGCNMGERTLVVNE 283
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 66 bits (160), Expect = 4e-011
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = +1
Query: 598 KTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLNEDGFNK 777
++ VTGF+ S+ DD+K++L +F + GEI R+ +P TG S G AY+DL E G K
Sbjct: 234 RSFSVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGSLGYAYIDLKE-GAEK 292
Query: 778 ALELNGSALGGRNIVVIEARPKEKNAD-------GNSGR 873
ALEL +GG ++VV +A P + GN GR
Sbjct: 293 ALELGRHDVGGWDLVVGKAEPIRSGSTWPFPGRCGNQGR 331
>TAIR9_protein||AT1G45100.1 | Symbols: | polyadenylate-binding protein,
putative / PABP, putative | chr1:17050631-17052189 FORWARD
Length = 498
Score = 59 bits (141), Expect = 6e-009
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Frame = +1
Query: 328 AEQKSIAKEPKTLFAGHLPFQIEKSDLEKFFKEVGEIVDVRLA-------KGFAHVEFAS 486
AE+ +I KTLF +L I+ SD+ FFK+VGE+V VRL G+ VEFAS
Sbjct: 240 AEEAAIT---KTLFVANLRDSIQISDIINFFKDVGEVVHVRLIVNSQGKHAGWGFVEFAS 296
Query: 487 EEAAHKALELNGKPLLGRNILLDFAKARPASRP 585
A KAL NG+ L I LD AK P P
Sbjct: 297 ANEAEKALVKNGEYLHNYKISLDGAKTAPHRPP 329
>TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding /
nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins
in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
- 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr5:21011418-21013657 FORWARD
Length = 413
Score = 53 bits (126), Expect = 3e-007
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Frame = +1
Query: 601 TIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLD----LNEDG 768
TIFV G++ S+ E+D+ +L HF CG I RI Y +T D+ G A L + G
Sbjct: 194 TIFVKGYDSSLGENDLARALLEHFSPCGMISRI----YFQTNDA-GEAVLKHVFIVMLQG 248
Query: 769 FNKALELNGSALGGRNIVVIEARPKEK 849
AL+LNGS +GG N+ V +A +++
Sbjct: 249 TEDALKLNGSDMGGCNLEVHDATERDE 275
>TAIR9_protein||AT5G41690.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr5:16670126-16674189 REVERSE
Length = 568
Score = 52 bits (122), Expect = 9e-007
Identities = 41/105 (39%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Frame = +1
Query: 295 NKKNTNGEMVEAEQKSIAKEPKTLFAGHLPFQIEKSDLEKFFKEVGEIVDVRLA------ 456
++ T E VEA + KTLF HL + E + + FFK+VGE+V VRL
Sbjct: 291 DEDETPPEFVEA----VGVRKKTLFVAHLSRKTEITHIINFFKDVGEVVHVRLILNHTGK 346
Query: 457 -KGFAHVEFASEEAAHKALEL-NGKPLLGRNILLDFAKARPASRP 585
G A VEF S A ALE NG+ L I L+ AK P P
Sbjct: 347 HVGCAFVEFGSANEAKMALETKNGEYLNDCKIFLEVAKMVPYPPP 391
Score = 50 bits (117), Expect = 3e-006
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Frame = +1
Query: 337 KSIAKEPKTLFAGHLPFQIEKSDLEKFFKEVGEIVDVRL-------AKGFAHVEFASEEA 495
K A KTLF +LP++ + ++ FFK+VGE+V V+L G VEFAS
Sbjct: 61 KEAAVREKTLFVANLPYETKIPNIIDFFKKVGEVVRVQLIVNLKGKLVGCGFVEFASVNE 120
Query: 496 AHKALE-LNGKPLLGRNILLDFAKARPASRP 585
A +AL+ NG+ L I LD A + P
Sbjct: 121 AEEALQKKNGECLDNNKIFLDVANKKATYLP 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,480,057,333
Number of Sequences: 33410
Number of Extensions: 11480057333
Number of Successful Extensions: 375622710
Number of sequences better than 0.0: 0
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