BLASTX 7.6.2
Query= UN22100 /QuerySize=672
(671 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01700.1 | Symbols: AGP11, ATAGP11 | AGP11 | c... 186 2e-047
TAIR9_protein||AT5G14380.1 | Symbols: AGP6 | AGP6 (Arabinogalact... 158 4e-039
TAIR9_protein||AT3G27416.1 | Symbols: | unknown protein | chr3:... 74 9e-014
TAIR9_protein||AT5G10430.1 | Symbols: AGP4, ATAGP4 | AGP4 (ARABI... 52 2e-007
TAIR9_protein||AT3G28780.1 | Symbols: | unknown protein | chr3:... 52 3e-007
TAIR9_protein||AT4G09030.1 | Symbols: AGP10, ATAGP10 | AGP10 (AR... 50 1e-006
TAIR9_protein||AT3G27415.1 | Symbols: | unknown protein | chr3:... 49 3e-006
TAIR9_protein||AT3G22142.1 | Symbols: | structural constituent ... 47 7e-006
>TAIR9_protein||AT3G01700.1 | Symbols: AGP11, ATAGP11 | AGP11 |
chr3:258981-259391 FORWARD
Length = 137
Score = 186 bits (470), Expect = 2e-047
Identities = 102/140 (72%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Frame = +1
Query: 94 MARQFVVFGLLALVVATAFAAEAPSAAPTASPTKAPATKAPAAAPKSSTSASAPKASSPV 273
MAR FVV LLAL V T FAA+APSAAPTASPTK+P TKAPAAAPKS SA+APKASSPV
Sbjct: 1 MARLFVVVALLALAVGTVFAADAPSAAPTASPTKSP-TKAPAAAPKS--SAAAPKASSPV 57
Query: 274 AEEPTAEDDYTGNSPTESVEGPTVSSPPAPTPEA---SADGPSSDAPTPGPEVLDGSATN 444
AEEPT EDDY+ SP++S E PTVSSPPAPTPEA S+DGPSSD P G+ TN
Sbjct: 58 AEEPTPEDDYSAASPSDSAEAPTVSSPPAPTPEADGPSSDGPSSDGPAAAESPKSGATTN 117
Query: 445 VKLSIAGTVAALGFFFFSL* 504
VKLSIAGTVAA GFF FSL*
Sbjct: 118 VKLSIAGTVAAAGFFIFSL* 137
>TAIR9_protein||AT5G14380.1 | Symbols: AGP6 | AGP6 (Arabinogalactan proteins 6)
| chr5:4636088-4636540 REVERSE
Length = 151
Score = 158 bits (398), Expect = 4e-039
Identities = 90/154 (58%), Positives = 106/154 (68%), Gaps = 20/154 (12%)
Frame = +1
Query: 94 MARQFVVFGLLALVVATAFAAEAPSA------APTASPTKAPA---------TKAPAAAP 228
MARQFVV LL L +ATAFAA+APSA +PTA+PTKAP TKAPAAAP
Sbjct: 1 MARQFVVLVLLTLTIATAFAADAPSASPKKSPSPTAAPTKAPTATTKAPSAPTKAPAAAP 60
Query: 229 KSSTSASAPKASSPVAEEPTAEDDYTGNSPTESVEGPTVSSPPAPTPE--ASADGPSSDA 402
KSS SAS+PKASSP AE P EDDY+ +SP++S E PTVSSPPAPTP+ ++ADGPS
Sbjct: 61 KSS-SASSPKASSPAAEGPVPEDDYSASSPSDSAEAPTVSSPPAPTPDSTSAADGPSDGP 119
Query: 403 PTPGPEVLDGSATNVKLSIAGTVAALGFFFFSL* 504
P+ G+ T K S+ GTVA +GFFFFS *
Sbjct: 120 TAESPK--SGAVTTAKFSVVGTVATVGFFFFSF* 151
>TAIR9_protein||AT3G27416.1 | Symbols: | unknown protein |
chr3:10147371-10147886 REVERSE
Length = 172
Score = 74 bits (179), Expect = 9e-014
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Frame = +1
Query: 139 ATAFAAEAPSA-APTASPTKAP--ATKAPAAAPKSSTSASAPKASS--PVAEEPTAEDDY 303
A A + ++P+A APT+ PT AP A K P S S+ +PK+SS A P +
Sbjct: 44 AAAASPKSPTASAPTSPPTAAPTMAKKNSTGTPSPSPSSPSPKSSSAKTPASSPDSSSGD 103
Query: 304 TGNSPTESVEGPTVSSPPAPTPEASADGPSSDAPTPGPEVL--DGSATNVKLSIAGTV-A 474
+ PT S + PT SSPPAPTPE S + GPE A+++ +S++G+V A
Sbjct: 104 SSEGPTSSSDAPTASSPPAPTPEMSPSSDDGTGASDGPEASAPAAGASSLVISVSGSVLA 163
Query: 475 ALGFFFF 495
A+ + FF
Sbjct: 164 AVAWLFF 170
>TAIR9_protein||AT5G10430.1 | Symbols: AGP4, ATAGP4 | AGP4 (ARABINOGALACTAN
PROTEIN 4) | chr5:3277828-3278235 REVERSE
Length = 136
Score = 52 bits (124), Expect = 2e-007
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Frame = +1
Query: 94 MARQFVVFGLLALVVATAFAAEAPSAAPTASPTKAPATKAPAAAPKSSTSASAPKASSPV 273
M + V L+ + AT+ A+AP+ PTA+P PAT P A P A+ P A++P
Sbjct: 1 MGSKIVQVFLMLALFATSALAQAPAPTPTATP--PPATPPPVATP--PPVATPPPAATPA 56
Query: 274 -AEEPTAEDDYTGNSPTESVEGPT---VSSPPAP----TPEASADGPSSDAPTPGPEVLD 429
A P A +P P +SPPAP +SA GPS +P P
Sbjct: 57 PATPPPAATPAPATTPPSVAPSPADVPTASPPAPEGPTVSPSSAPGPSDASPAP------ 110
Query: 430 GSATNVKLSIAGTVAA 477
+A + K AGT A
Sbjct: 111 SAAFSNKAFFAGTAFA 126
>TAIR9_protein||AT3G28780.1 | Symbols: | unknown protein |
chr3:10806131-10808369 REVERSE
Length = 675
Score = 52 bits (123), Expect = 3e-007
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Frame = -1
Query: 431 PSSTSGPGVGASDDGPSAEASGVGAGGEETVGPSTDSVGLFPV*SSSAVGSSATGD--DA 258
PS S G G++ GPS + AGGE ++G + S G ++ GS+AT D DA
Sbjct: 237 PSYPSDDGSGSTAGGPSGSTTDGSAGGESSMGGDSSSAG-----AAGESGSAATADSGDA 291
Query: 257 LGAD---AEVEDLGAAAGALVAGALVGEAVGAAEGASAAN 147
GAD A D G AA A GA GE A+ GA+AA+
Sbjct: 292 AGADSGGAAGADSGGAASADSGGAAAGET--ASGGAAAAD 329
>TAIR9_protein||AT4G09030.1 | Symbols: AGP10, ATAGP10 | AGP10 (ARABINOGALACTAN
PROTEIN 10) | chr4:5792249-5792632 FORWARD
Length = 128
Score = 50 bits (118), Expect = 1e-006
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Frame = +1
Query: 121 LLALVVATAFAAEAPSAAPTASPTKAPATKAPAAAPKSSTSASAPKASSPVAEEPTAEDD 300
L ++A++ A+AP APT SP +PA AAP T + P + + PTA
Sbjct: 10 LFLALIASSAIAQAPGPAPTRSPLPSPAQPPRTAAP---TPSITPTPTPTPSATPTA--- 63
Query: 301 YTGNSPTESVEGPTVSSPPAPTPEASADGPSSDAPTPGPEVLDGSATNVKLSIAGTVAA- 477
SP P+ +SPPAP + DG AP GP +T V + A T+AA
Sbjct: 64 -APVSPPAGSPLPSSASPPAPPTSLTPDG----APVAGPT----GSTPVDNNNAATLAAG 114
Query: 478 --LGFFF 492
GF F
Sbjct: 115 SLAGFVF 121
>TAIR9_protein||AT3G27415.1 | Symbols: | unknown protein |
chr3:10147375-10147902 FORWARD
Length = 176
Score = 49 bits (114), Expect = 3e-006
Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Frame = -1
Query: 494 KKKNPRAA-TVPAME--SFTLVALPSSTSGPGVGASDDGPSAEASGVGAGGEETVGPSTD 324
KK + AA T P E S A + SGP + + SGVGAGGEE VG S +
Sbjct: 2 KKSHATAARTEPETEITSDEAPAAGAEASGPSLAPVPSSEDGDISGVGAGGEEAVGASEE 61
Query: 323 SVGLFPV*SS----SAVGSSATGDDALGADAEVEDLGAAAGALVAGALVGEAVGAAEGAS 156
VG P S S + + DD G + E LG + A+VG AVG GA
Sbjct: 62 LVG--PSEESPELESGLEAGVLADDDFGDGEDGEGLGVPVEFFL--AMVGAAVGGEVGAE 117
Query: 155 A 153
A
Sbjct: 118 A 118
>TAIR9_protein||AT3G22142.1 | Symbols: | structural constituent of cell wall |
chr3:7803604-7808046 REVERSE
Length = 1481
Score = 47 bits (111), Expect = 7e-006
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +2
Query: 143 PHSLLRHPQLLPPPPLPR-HPPPRHRLLHPNPPPQHPHPKHRPLWQRNQQPKTITQETAP 319
PH +H + P PP + HP P+ + P PP +HPHPK P + + PK T+
Sbjct: 36 PHKPPKHSVVPPKPPAVKPHPHPKPPTIKPPPPKRHPHPK-PPTVKPHPHPKPPTKP--- 91
Query: 320 LNLSRDPPSPPH-QLLPQRLRLMDH-----HPMHPPLAPRYLMAAPLT*SSPSPALSPPS 481
+ PP+ PH P ++ H HP P + P P + P P PP+
Sbjct: 92 -HPHPKPPTKPHPHPKPPTIKPPPHPKPRPHPKPPNVKPH---PHPKPPTKPHPHPKPPT 147
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,480,057,333
Number of Sequences: 33410
Number of Extensions: 11480057333
Number of Successful Extensions: 375622710
Number of sequences better than 0.0: 0
|
