BLASTX 7.6.2
Query= UN22101 /QuerySize=864
(863 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S... 299 2e-081
TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S... 207 1e-053
>TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S8 (RPS8A) |
chr5:6851695-6853012 REVERSE
Length = 223
Score = 299 bits (765), Expect = 2e-081
Identities = 153/171 (89%), Positives = 157/171 (91%), Gaps = 4/171 (2%)
Frame = +1
Query: 205 KTLRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLQ 384
+ LRLDTGNYSWGSEA TRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYL
Sbjct: 57 RALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLS 116
Query: 385 HYGVEVGRKKKSAASVAAKKDGEEGEEAAPAAAAPEETKKSNHVLRKIESRQEGRSLDSH 564
HYGVE+GRKKKSA+S KKDGEEGEEA A AAPEE KKSNH+LRKI SRQEGRSLDSH
Sbjct: 117 HYGVELGRKKKSASS--TKKDGEEGEEA--AVAAPEEVKKSNHLLRKIASRQEGRSLDSH 172
Query: 565 IEDQFASGRLLACISFRPGQCGRADGYILEGKELEFYQKKIQKKKGKGAA* 717
IEDQFASGRLLACIS RPGQCGRADGYILEGKELEFY KKIQKKKGKGAA*
Sbjct: 173 IEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 223
Score = 94 bits (231), Expect = 1e-019
Identities = 46/56 (82%), Positives = 48/56 (85%), Gaps = 3/56 (5%)
Frame = +1
Query: 82 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKT---LRLDTGNYSW 240
MGISRDSIHKRRATGGKQK WRKKRKYEMGRQPANTKLSSNKT +R+ GN W
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKW 56
>TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S8 (RPS8B) |
chr5:23902626-23903670 REVERSE
Length = 211
Score = 207 bits (525), Expect = 1e-053
Identities = 121/222 (54%), Positives = 140/222 (63%), Gaps = 27/222 (12%)
Frame = +1
Query: 82 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKT---LRLDTGNYSWGSEA 252
MGISRDSIHKRRATGGKQK WRKKRKYE+GRQPANTKLSSNKT +R+ GN W
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKW---- 56
Query: 253 VTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPF--KQWYLQHYGVEV-------G 405
+ LD + +E V KT + Q ++ V+V G
Sbjct: 57 ---RALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQG 113
Query: 406 RKKKSAASVAAKKDGEEGEEAAPAAAAPEETKKSNHVLRKIESRQEGRSLDSHIEDQFAS 585
+ + KK GE A EE KKSNHV RK+E RQEGR+LDSH+E+QF+S
Sbjct: 114 YLQHYGVDIGRKKKGE--------AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSS 165
Query: 586 GRLLACISFRPGQCGRADGYILEGKELEFYQKKIQKKKGKGA 711
GRLLACI+ RPGQCGRADGYILEGKELEFY KK+QKKKGK A
Sbjct: 166 GRLLACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNA 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,480,057,333
Number of Sequences: 33410
Number of Extensions: 11480057333
Number of Successful Extensions: 375622710
Number of sequences better than 0.0: 0
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