BLASTX 7.6.2
Query= UN22249 /QuerySize=1022
(1021 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus... 60 2e-008
sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=G... 60 3e-008
sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN... 59 4e-008
sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN... 59 5e-008
sp|Q7T320|GORAB_DANRE RAB6-interacting golgin OS=Danio rerio GN=... 52 8e-006
>sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus GN=Gorab PE=2
SV=2
Length = 368
Score = 60 bits (145), Expect = 2e-008
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 289 RAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVALVRKKIDSV 468
R EE+ ++KK + + + + R + ET +L I++EL+ L D + ++ ++R +ID
Sbjct: 154 RLMEEKNKRKKALLAQAIAERSRRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 213
Query: 469 NKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITKLMELVGESEKVRMKKLEELSKN 648
+ E + E EY A K K QL L ++ ++E + +KLEEL +
Sbjct: 214 SLEYSYARKRFDRAEAEYVTAKLDLQRKTETKEQLTEHLCTIIQQNELRKAQKLEELMRQ 273
Query: 649 ID 654
+D
Sbjct: 274 LD 275
>sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=GORAB PE=2 SV=2
Length = 370
Score = 60 bits (143), Expect = 3e-008
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 289 RAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVALVRKKIDSV 468
R EE+ ++KK + + + + R + ET +L I++EL+ L D + ++ ++R +ID
Sbjct: 151 RLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 210
Query: 469 NKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITKLMELVGESEKVRMKKLEELSKN 648
+ + + E EY A K K QL L ++ ++E + KKLEEL +
Sbjct: 211 SLDYSYARKRFDRAEAEYVTAKLELQRKTELKEQLTEHLCTIIQQNELRKAKKLEELMQQ 270
Query: 649 ID 654
+D
Sbjct: 271 LD 272
>sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN=Gorab PE=1
SV=1
Length = 368
Score = 59 bits (142), Expect = 4e-008
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 289 RAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVALVRKKIDSV 468
R EE+ ++KK + + + + + + ET +L I++EL+ L D + ++ ++R +ID
Sbjct: 154 RLMEEKNKRKKALLAQAIAERSKKTQAETIKLKRIQKELQALDDMVSADIGILRNRIDQA 213
Query: 469 NKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITKLMELVGESEKVRMKKLEELSKN 648
+ E + E EY A K K QL L ++ ++E + KKLEEL +
Sbjct: 214 SLEYSYARKRFDRAEAEYITAKLDLQRKTETKEQLTEHLCTIIQQNELRKAKKLEELMQQ 273
Query: 649 ID 654
+D
Sbjct: 274 LD 275
>sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN=GORAB PE=1
SV=1
Length = 394
Score = 59 bits (141), Expect = 5e-008
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 289 RAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVALVRKKIDSV 468
R EE+ ++KK + + + + R + ET +L I++EL+ L D + ++ ++R +ID
Sbjct: 179 RLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 238
Query: 469 NKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITKLMELVGESEKVRMKKLEELSKN 648
+ + + E EY A K K QL L ++ ++E + KKLEEL +
Sbjct: 239 SLDYSYARKRFDRAEAEYIAAKLDIQRKTEIKEQLTEHLCTIIQQNELRKAKKLEELMQQ 298
Query: 649 ID 654
+D
Sbjct: 299 LD 300
>sp|Q7T320|GORAB_DANRE RAB6-interacting golgin OS=Danio rerio GN=gorab PE=2
SV=1
Length = 336
Score = 52 bits (122), Expect = 8e-006
Identities = 31/122 (25%), Positives = 61/122 (50%)
Frame = +1
Query: 289 RAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVALVRKKIDSV 468
R EE+ +K+K + + + + + + E +L I+ EL+ L D + ++ ++RK I+
Sbjct: 144 RIMEEKNKKRKALLTKTIAEKSKQTQAEAIKLKKIQRELQVLDDSVSSDIGVLRKLIEQS 203
Query: 469 NKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITKLMELVGESEKVRMKKLEELSKN 648
+ + +K E EY A + K K QL L ++ ++E + +KLEEL
Sbjct: 204 SMDYSLAWKRFEKAEAEYVAAKMDLHRKTEVKEQLTEHLCAIIQQNELRKARKLEELMLQ 263
Query: 649 ID 654
++
Sbjct: 264 LE 265
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,892,683,958
Number of Sequences: 518415
Number of Extensions: 92892683958
Number of Successful Extensions: 611291351
Number of sequences better than 0.0: 0
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