BLASTX 7.6.2
Query= UN22259 /QuerySize=1758
(1757 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis... 264 2e-069
sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis... 257 3e-067
sp|Q962T2|RL28_SPOFR 60S ribosomal protein L28 OS=Spodoptera fru... 80 3e-014
sp|Q3T0L7|RL28_BOVIN 60S ribosomal protein L28 OS=Bos taurus GN=... 74 3e-012
sp|P46779|RL28_HUMAN 60S ribosomal protein L28 OS=Homo sapiens G... 73 5e-012
sp|P41105|RL28_MOUSE 60S ribosomal protein L28 OS=Mus musculus G... 73 5e-012
sp|P17702|RL28_RAT 60S ribosomal protein L28 OS=Rattus norvegicu... 68 2e-010
>sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis thaliana
GN=RPL28C PE=2 SV=1
Length = 143
Score = 264 bits (673), Expect = 2e-069
Identities = 131/143 (91%), Positives = 136/143 (95%)
Frame = -3
Query: 1689 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 1510
M TVPGQL+WEIVKRNNCFLVKQFGRGNAKVQFSKESNNL N+NSYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 1509 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 1330
A KDQGVVLGTTKTK+QNKPKLSVNKS+LKKEF RM+K VANQVVDNYYRPDLKKAALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 1329 RLSVISKGLRVAKSGPKRRNRQA 1261
RLS ISKGLRVAKSGPKRRNRQA
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143
>sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis thaliana
GN=RPL28A PE=1 SV=1
Length = 143
Score = 257 bits (654), Expect = 3e-067
Identities = 127/143 (88%), Positives = 135/143 (94%)
Frame = -3
Query: 1689 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 1510
M TVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE+NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 1509 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 1330
ADKDQ VVL TTKTKKQNKPKLSVNKS+LKKEFPRM+KAVANQVVDNYYRPDLKKAALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 1329 RLSVISKGLRVAKSGPKRRNRQA 1261
RLS ISKGLRVAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143
>sp|Q962T2|RL28_SPOFR 60S ribosomal protein L28 OS=Spodoptera frugiperda
GN=RpL28 PE=2 SV=1
Length = 139
Score = 80 bits (197), Expect = 3e-014
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Frame = -3
Query: 1668 LVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPADKDQG 1489
L W I++ NN FLVK + N K FSKE NN+ NLNSY+++GL KK V + +G
Sbjct: 5 LNWMIIRNNNAFLVK---KRNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRKG 61
Query: 1488 VVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALARLSVISK 1309
+ K K NKP + + K R V + N+YR DL KA L R S I +
Sbjct: 62 FTVVYKKAKATNKPAKNAVRRQFKAGARRSLYKVKRLLKANHYRTDLSKATLRRASAILR 121
Query: 1308 GLRVAKS 1288
R K+
Sbjct: 122 SQRPIKA 128
>sp|Q3T0L7|RL28_BOVIN 60S ribosomal protein L28 OS=Bos taurus GN=RPL28 PE=2
SV=3
Length = 137
Score = 74 bits (180), Expect = 3e-012
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Frame = -3
Query: 1662 WEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPADKDQGVV 1483
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++PA +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 61
Query: 1482 LGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALARLSVISKGL 1303
+ + Q KP S ++ + K ++ + + N YRPDL+ AA+ R S I +
Sbjct: 62 VVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQ 121
Query: 1302 R--VAKSGPKRRNRQA 1261
+ + K P R + +
Sbjct: 122 KPVMVKRKPSRPTKSS 137
>sp|P46779|RL28_HUMAN 60S ribosomal protein L28 OS=Homo sapiens GN=RPL28 PE=1
SV=3
Length = 137
Score = 73 bits (178), Expect = 5e-012
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Frame = -3
Query: 1662 WEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPADKDQGVV 1483
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++PA +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 61
Query: 1482 LGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALARLSVISKGL 1303
+ + Q KP S ++ + K ++ + + N YRPDL+ AA+ R S I +
Sbjct: 62 VVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQ 121
Query: 1302 RVAKSGPKR 1276
+ KR
Sbjct: 122 KPVMVKRKR 130
>sp|P41105|RL28_MOUSE 60S ribosomal protein L28 OS=Mus musculus GN=Rpl28 PE=1
SV=2
Length = 137
Score = 73 bits (178), Expect = 5e-012
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Frame = -3
Query: 1662 WEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPADKDQGVV 1483
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++PA +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 61
Query: 1482 LGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALARLSVISKGL 1303
+ + Q KP S ++ + K ++ + + N YRPDL+ AA+ R S I L
Sbjct: 62 VVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI---L 118
Query: 1302 RVAKSGPKRRNR 1267
R K +R R
Sbjct: 119 RSQKPVVVKRKR 130
>sp|P17702|RL28_RAT 60S ribosomal protein L28 OS=Rattus norvegicus GN=Rpl28 PE=1
SV=4
Length = 137
Score = 68 bits (164), Expect = 2e-010
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Frame = -3
Query: 1662 WEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPADKDQGVV 1483
W +V+ + FL+K+ K +S E NNL NS++++GL ++KTV ++ +GVV
Sbjct: 7 WMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEAWPDGKGVV 61
Query: 1482 LGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALARLSVISKGL 1303
+ + Q KP S ++ + K ++ + + N YRPDL+ AA+ R S I L
Sbjct: 62 VVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI---L 118
Query: 1302 RVAKSGPKRRNR 1267
R K +R R
Sbjct: 119 RSQKPVVVKRKR 130
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,892,683,958
Number of Sequences: 518415
Number of Extensions: 92892683958
Number of Successful Extensions: 611291351
Number of sequences better than 0.0: 0
|
