BLASTX 7.6.2
Query= UN22287 /QuerySize=1193
(1192 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT... 450 2e-124
gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor S... 445 9e-123
gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; ... 445 9e-123
gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing fact... 439 5e-121
gi|224120944|ref|XP_002318458.1| predicted protein [Populus tric... 428 1e-117
gi|255648057|gb|ACU24484.1| unknown [Glycine max] 399 6e-109
gi|255636783|gb|ACU18725.1| unknown [Glycine max] 398 2e-108
gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing f... 397 2e-108
gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein... 389 6e-106
gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like pro... 341 1e-091
gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare ... 341 2e-091
gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sati... 319 8e-085
gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 ... 253 5e-065
gi|224132592|ref|XP_002321360.1| predicted protein [Populus tric... 225 2e-056
gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT... 210 7e-052
gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF... 206 9e-051
gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japo... 206 9e-051
gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triti... 199 1e-048
gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 ... 188 2e-045
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222
[Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 450 bits (1157), Expect = 2e-124
Identities = 231/285 (81%), Positives = 245/285 (85%), Gaps = 9/285 (3%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGY---GGGGGSARFGVS 762
AI GRDGYNFDG RLRVELAHGGRGQSS DRR GGY GGGGGGY GGGGGSARFGVS
Sbjct: 61 AIKGRDGYNFDGCRLRVELAHGGRGQSSSDRR--GGYGGGGGGGYGGGGGGGGSARFGVS 118
Query: 761 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR 582
RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIR 178
Query: 581 KLDDTEFRNPWARGYIRVKKYES--SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDL- 411
KLDDTEFRNPWARG+IRVKKYES S+SRSPSRSRSRSR R RS SR RSRS + L
Sbjct: 179 KLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRSRGRGRSRSRSRSLS 238
Query: 410 -SKSPRRSLSRSLSKSRSPSPDRKKSPPRAMSRSRSRSLSKSPAK 279
SKSPR+ LS+S +S S S + +SP +S R++S+S ++
Sbjct: 239 RSKSPRKDLSKSPKRSLSRSISKSRSPSPDNKKSSPRAMSRSRSR 283
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis
thaliana]
Length = 300
Score = 445 bits (1143), Expect = 9e-123
Identities = 229/282 (81%), Positives = 238/282 (84%), Gaps = 4/282 (1%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYN DG RLRVELAHGGRGQSS DRRGG G G G GG GGGGGSARFGVSRHS
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 572 DTEFRNPWARGYIRVKKYES--SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DTEFRNPWARG+IRVKKYES S+SRSPSRSRSRSR R RS R S SRS SKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240
Query: 398 RRSLSRS--LSKSRSPSPDRKKSPPRAMSRSRSRSLSKSPAK 279
R+ LS+S S SRS S R SP + S R+ S SKS ++
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSR 282
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514
[Arabidopsis thaliana]
Length = 295
Score = 445 bits (1143), Expect = 9e-123
Identities = 229/282 (81%), Positives = 238/282 (84%), Gaps = 4/282 (1%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYN DG RLRVELAHGGRGQSS DRRGG G G G GG GGGGGSARFGVSRHS
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 572 DTEFRNPWARGYIRVKKYES--SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DTEFRNPWARG+IRVKKYES S+SRSPSRSRSRSR R RS R S SRS SKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240
Query: 398 RRSLSRS--LSKSRSPSPDRKKSPPRAMSRSRSRSLSKSPAK 279
R+ LS+S S SRS S R SP + S R+ S SKS ++
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSR 282
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2
[Arabidopsis thaliana]
Length = 297
Score = 439 bits (1128), Expect = 5e-121
Identities = 222/274 (81%), Positives = 232/274 (84%), Gaps = 2/274 (0%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYN DG RLRVELAHGGRGQSS DRRGG G G G GG GGGGGSARFGVSRHS
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 572 DTEFRNPWARGYIRVKKYES--SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DTEFRNPWARG+IRVKKYES S+SRSPSRSRSRSR R RS R S SRS SKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240
Query: 398 RRSLSRSLSKSRSPSPDRKKSPPRAMSRSRSRSL 297
R+ LS+S +S S S + +SP +S R +
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRQV 274
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 428 bits (1099), Expect = 1e-117
Identities = 216/281 (76%), Positives = 237/281 (84%), Gaps = 11/281 (3%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSR+IYVGNLP DIRES++EDLFYKYGRI+D+ELK+PPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRG--GGGYRGGGGGGYGGGGGSARFGVSR 759
AI GRDGYNFDGSRLRVELAHGGRG SS DRRG GGG GGGGGG GGGGG R G+SR
Sbjct: 61 AIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGISR 120
Query: 758 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRK 579
HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRD DGT G+VDYTN++DMKYAIRK
Sbjct: 121 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRK 180
Query: 578 LDDTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
LDDTEF+NPWAR YIRVK+YE S SRS SR RSRSR R SRSRSPR++ SKS
Sbjct: 181 LDDTEFKNPWARAYIRVKQYEGSPSRSRSRGRSRSRSR--------SRSRSPRRNRSKSL 232
Query: 398 RRSLSRSLSKSRSPSPDRKKSPPR-AMSRSRSRSLSKSPAK 279
RS+SRS S+SRS S R SP + + +SRSRS S+SP K
Sbjct: 233 ERSVSRSRSRSRSRSKTRSASPLKSSRPKSRSRSRSESPTK 273
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 399 bits (1024), Expect = 6e-109
Identities = 209/275 (76%), Positives = 226/275 (82%), Gaps = 17/275 (6%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSR+IYVGNLP DIRESEIEDLFYKYGRI+DIELKVPPRPPCYCFVEF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYNFDG RLRVELAHGGRG SS DRRG GG GGG GG GGG RFG+SRHS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGG--GGGNGGAGGG----RFGISRHS 114
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLD
Sbjct: 115 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLD 174
Query: 572 DTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSP--------SRSVSRSRSPRK 417
D EFRNPWAR YIRV+KYESS+SRS SRS SRS R RSP RSVS+SRS +
Sbjct: 175 DAEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRSRSLERSVSKSRS--R 232
Query: 416 DLSKSPRRSLSRSLSKSRSPSPDRKKSPPRAMSRS 312
S SP +S SR S+SRS S SP + +S S
Sbjct: 233 SQSASPIKS-SRPRSRSRSRSRSGSGSPHQVLSGS 266
>gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 398 bits (1020), Expect = 2e-108
Identities = 210/275 (76%), Positives = 225/275 (81%), Gaps = 17/275 (6%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSR+IYVGNLP DIRESEIEDLFYKYGRI+DIELKVPPRPPCYCFVEF++ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYNFDG RLRVELAHGGRG SS DRRG GG GGG GG GGG RFG+SRHS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGG--GGGNGGAGGG----RFGISRHS 114
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT G+VDYTNYDDMKYAIRKLD
Sbjct: 115 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLD 174
Query: 572 DTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSP--------SRSVSRSRSPRK 417
DTEFRNPWA YIRV+KYESS+SRS SRS SRS R RSP RSVSRSRS +
Sbjct: 175 DTEFRNPWAIAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRSRSLERSVSRSRS--R 232
Query: 416 DLSKSPRRSLSRSLSKSRSPSPDRKKSPPRAMSRS 312
S SP +S SR S+SRS S SP + +S S
Sbjct: 233 SQSASPIKS-SRPRSRSRSRSRSGSGSPHQVLSGS 266
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative
[Ricinus communis]
Length = 264
Score = 397 bits (1019), Expect = 2e-108
Identities = 206/269 (76%), Positives = 224/269 (83%), Gaps = 8/269 (2%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSR+IYVGNLP DIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYNFDG RLRVELAHGGRGQSS DRR GGY G GGGG G GG R+ +SRHS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRR--GGYGGSGGGGSGSGG---RYCISRHS 115
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDSDGT+G+VDYTNY+DMKYAIRKLD
Sbjct: 116 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLD 175
Query: 572 DTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSR--SRSPRKDLSKSP 399
DTEFRNPWAR YIRVK YE+S SRS SRSRSRSR R+ S+S+ R SRS K S SP
Sbjct: 176 DTEFRNPWARAYIRVKMYENSPSRSRSRSRSRSRSPRRNRSKSLERSPSRSVSKSRSASP 235
Query: 398 RRSLSRSLSKSRSPSPDRKKSPPRAMSRS 312
+S SR+ S SRS S SP +A S S
Sbjct: 236 VKS-SRAKSGSRSRSRSVSGSPNKAPSGS 263
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum
tuberosum]
Length = 269
Score = 389 bits (998), Expect = 6e-106
Identities = 197/271 (72%), Positives = 221/271 (81%), Gaps = 10/271 (3%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLP DI+E E+EDLFYKYGRI+DIELK+PPRPPCYCFVEFE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRG-QSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRH 756
AI GRDGYNFDG RLRVELAHGGRG SS DRRG G GGGGGG G R G+SRH
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGG------RHGISRH 114
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
S++RVI+RGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNY+DMKYAIRKL
Sbjct: 115 SDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKL 174
Query: 575 DDTEFRNPWARGYIRVKKYESSQSRSPSRSRSRS---RGRGRSPSRSVSRSRSPRKDLSK 405
DDTEFRNPW R YIRV++Y+ S SRS SRSRSRS R RSP+RSVSRS P+ +
Sbjct: 175 DDTEFRNPWTRTYIRVREYKGSPSRSRSRSRSRSRTPRKSRRSPARSVSRSPPPKSRSAS 234
Query: 404 SPRRSLSRSLSKSRSPSPDRKKSPPRAMSRS 312
+ + SRSLS+S S S R +SP R+ S S
Sbjct: 235 PVKSTRSRSLSRSMSRSRSRSRSPSRSRSAS 265
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein
[Arabidopsis thaliana]
Length = 243
Score = 341 bits (874), Expect = 1e-091
Identities = 164/179 (91%), Positives = 166/179 (92%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYN DG RLRVELAHGGRGQSS DRRGG G G G GG GGGGGSARFGVSRHS
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYA+R L
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAVRNL 179
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 294
Score = 341 bits (872), Expect = 2e-091
Identities = 179/278 (64%), Positives = 208/278 (74%), Gaps = 10/278 (3%)
Frame = -3
Query: 1100 FSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDG 921
+SR+IYVGNLPGDIRE +EDLFYKYGRIVDI+LKVPPRPP Y FVEFE PRDAEDA G
Sbjct: 5 WSRTIYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAG 64
Query: 920 RDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHSEFRV 741
RDGYNFDG+RLRVE AHGGRG G + GGG G GGGS R GVSRH+++RV
Sbjct: 65 RDGYNFDGNRLRVEPAHGGRGSGGPSHDRSGSFGGGG----GAGGGSGRRGVSRHTDYRV 120
Query: 740 IVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEF 561
+V GLPSSASWQDLKDHMR+AGDVCF+EV R+ GT G+ DYTNYDDMKYAI+KLDDTEF
Sbjct: 121 LVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYAIKKLDDTEF 180
Query: 560 RNPWARGYIRVKKYESSQSRSPSRSR--SRSRGRGRSPSRSVSRSRSPRKDLSKSPRRSL 387
+N +++GYIRVK+Y+ + RS SRSR SRSR + RSPS+S R+RS + S+S S
Sbjct: 181 KNAFSKGYIRVKEYDGKRGRSYSRSRSPSRSRSKSRSPSKS-PRARSASRSRSRS-LSSR 238
Query: 386 SRSLSKSRSP--SPDRKKSPPRAMSRSRSRSLSKSPAK 279
SRS SK R P SP R KSP + + S SP K
Sbjct: 239 SRSASKGRFPSRSPARSKSPIASPANGVVTSSRASPKK 276
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica
Group]
Length = 247
Score = 319 bits (816), Expect = 8e-085
Identities = 165/245 (67%), Positives = 189/245 (77%), Gaps = 20/245 (8%)
Frame = -3
Query: 1070 PGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGYNFDGSR 891
PGDIRE E+EDLFYKYGRIVDI+LK+PPRPP + FVEFE PRDAEDAI GRDGYNFDG+R
Sbjct: 15 PGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNR 74
Query: 890 LRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHSEFRVIVRGLPSSAS 711
LRVELAHGGRG SS GGG R G GVSRH+E+RV+V GLPSSAS
Sbjct: 75 LRVELAHGGRGNSSSFNNSGGGGRRG--------------GVSRHTEYRVLVTGLPSSAS 120
Query: 710 WQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGYIR 531
WQDLKDHMR AGDVC++EV R+ GT G+VDYTNYDDMKYAIRKLDD+EF+N +++ YIR
Sbjct: 121 WQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIR 180
Query: 530 VKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRS---RSPRKDLSKSPRRSL---SRSLSK 369
VK+Y+ +SRS SRSRSRSRGR S SRS S+S +S R+ S+S RS SRS SK
Sbjct: 181 VKEYDGKRSRSYSRSRSRSRGRSYSRSRSPSKSPKGKSSRRSASRSRSRSASSRSRSESK 240
Query: 368 SRSPS 354
RSPS
Sbjct: 241 GRSPS 245
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis
vinifera]
Length = 267
Score = 253 bits (645), Expect = 5e-065
Identities = 149/264 (56%), Positives = 169/264 (64%), Gaps = 17/264 (6%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSR+IYVGNLP DIRE EIEDLFYKYGRI+D+ELK+PPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQ-SSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRH 756
AI GRDGYNFDG RLRVELAHGGRGQ SS DRRGG G GGGG +G S G
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHG--SGGGGRFGVSRHSEYRGAYEI 118
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
+ + + + + G + T D Y + ++ IRKL
Sbjct: 119 GRYCWNLDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAQLTCSSLSQ----IRKL 174
Query: 575 DDTEFRNPWARGYIRVKKYE-----SSQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDL 411
DDTEFRNPWAR YIRVK+Y+ S+S SPSRSRS R R +S RSVSRS S K
Sbjct: 175 DDTEFRNPWARAYIRVKRYDVSPRSRSRSHSPSRSRSLKRNRSKSLERSVSRSAS--KSR 232
Query: 410 SKSPRRSLSRSLSKSRSPSPDRKK 339
S SP R RS S+S SP PD K
Sbjct: 233 SPSPVR---RSRSRSASPRPDFSK 253
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 225 bits (571), Expect = 2e-056
Identities = 112/142 (78%), Positives = 124/142 (87%), Gaps = 1/142 (0%)
Frame = -3
Query: 806 GGYGGGGGS-ARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTY 630
GGYGGGGGS RFG+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDSDGT+
Sbjct: 93 GGYGGGGGSGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTF 152
Query: 629 GVVDYTNYDDMKYAIRKLDDTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPS 450
GVVDYTN++DMKYAIRKLDDTEFRNPWAR YIRVK++ESS SRS SRSRSRSR R+ S
Sbjct: 153 GVVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKQHESSPSRSRSRSRSRSRSSRRNRS 212
Query: 449 RSVSRSRSPRKDLSKSPRRSLS 384
+S+ RS S + S+S RS S
Sbjct: 213 KSLERSVSRSRSRSRSKSRSAS 234
Score = 206 bits (524), Expect = 6e-051
Identities = 122/245 (49%), Positives = 146/245 (59%), Gaps = 21/245 (8%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSR+IYVGNLP DIRESEIEDLFYKYGRI+D+ELK+PPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARF------ 771
AI GRDGYNFDG RLRVELAHGGRG SS DRRGG GGGGG GG G +R
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGG----YGGGGGSGGRFGISRHSEFRVI 116
Query: 770 --GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDM 597
G+ + ++ + + + + G + T D Y + DD
Sbjct: 117 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAI---RKLDDT 173
Query: 596 KYAIRKLDDTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRK 417
++ + + R S+SRS SRSRS R R +S RSVSRSRS +
Sbjct: 174 EFR------NPWARAYIRVKQHESSPSRSRSRSRSRSRSSRRNRSKSLERSVSRSRSRSR 227
Query: 416 DLSKS 402
S+S
Sbjct: 228 SKSRS 232
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680
[Sorghum bicolor]
Length = 286
Score = 210 bits (532), Expect = 7e-052
Identities = 114/185 (61%), Positives = 134/185 (72%), Gaps = 6/185 (3%)
Frame = -3
Query: 803 GYGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGV 624
G+GGGGG AR GVSRHSE+RV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+
Sbjct: 95 GFGGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGI 154
Query: 623 VDYTNYDDMKYAIRKLDDTEFRNPWARGYIRVKKYESSQSRSPSRSR--SRSRGRGRSPS 450
VDYTNYDDMKYAI+KLDDTEFRN + R YIRVK+Y+ + RS SRSR SRS + RSPS
Sbjct: 155 VDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYDGKRGRSYSRSRSPSRSYSKSRSPS 214
Query: 449 RSVSRSRSPRKDLSKSPRRSLSRSLSKSRSP--SPDRKKSPPRAMSRSRSRSLSK-SPAK 279
+S RS + S+S S SRS SK RSP SP R KSP + + + S K SP +
Sbjct: 215 KSPKTRRSSSRSRSRSV-SSRSRSASKGRSPSRSPARSKSPNASPANGEAASPKKQSPNR 273
Query: 278 VQEGT 264
G+
Sbjct: 274 SPSGS 278
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa
Japonica Group]
Length = 362
Score = 206 bits (522), Expect = 9e-051
Identities = 115/185 (62%), Positives = 135/185 (72%), Gaps = 10/185 (5%)
Frame = -3
Query: 827 GYRGGGGGGYGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTR 648
G RG GGG R GVSRH+E+RV+V GLPSSASWQDLKDHMR AGDVC++EV R
Sbjct: 148 GGRGNSSSFNNSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYR 207
Query: 647 DSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRG 468
+ GT G+VDYTNYDDMKYAIRKLDD+EF+N +++ YIRVK+Y+ +SRS SRSRSRSRG
Sbjct: 208 EGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYDGKRSRSYSRSRSRSRG 267
Query: 467 RGRSPSRSVSRSRSPRKD-LSKSPRRSLSRSLSKSRSPSPDRKKSPPRAMSRS--RSRSL 297
RS SRSRSP K KS RRS SRS S+S S S R +S R+ SRS RS+S
Sbjct: 268 ------RSYSRSRSPSKSPKGKSSRRSASRSRSRSAS-SRSRSESKGRSPSRSPARSQSP 320
Query: 296 SKSPA 282
+ SPA
Sbjct: 321 NTSPA 325
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 206 bits (522), Expect = 9e-051
Identities = 115/185 (62%), Positives = 135/185 (72%), Gaps = 10/185 (5%)
Frame = -3
Query: 827 GYRGGGGGGYGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTR 648
G RG GGG R GVSRH+E+RV+V GLPSSASWQDLKDHMR AGDVC++EV R
Sbjct: 82 GGRGNSSSFNNSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYR 141
Query: 647 DSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRG 468
+ GT G+VDYTNYDDMKYAIRKLDD+EF+N +++ YIRVK+Y+ +SRS SRSRSRSRG
Sbjct: 142 EGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYDGKRSRSYSRSRSRSRG 201
Query: 467 RGRSPSRSVSRSRSPRKD-LSKSPRRSLSRSLSKSRSPSPDRKKSPPRAMSRS--RSRSL 297
RS SRSRSP K KS RRS SRS S+S S S R +S R+ SRS RS+S
Sbjct: 202 ------RSYSRSRSPSKSPKGKSSRRSASRSRSRSAS-SRSRSESKGRSPSRSPARSQSP 254
Query: 296 SKSPA 282
+ SPA
Sbjct: 255 NTSPA 259
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 199 bits (504), Expect = 1e-048
Identities = 118/208 (56%), Positives = 141/208 (67%), Gaps = 17/208 (8%)
Frame = -3
Query: 905 FDGSRLRVELAHGGRGQS-SGDR------RGGGGYRGGGGGGYGGGGGSARFGVSRHSEF 747
F+ R + HG G + G+R GG YGGGG R GVSRH+E+
Sbjct: 52 FEDPRDAEDAIHGRDGYNFDGNRLRVELAHGGRANSSSLPNSYGGGG--RRGGVSRHTEY 109
Query: 746 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDT 567
RV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ GT G+VDYTNYDDMKYAIRKLDDT
Sbjct: 110 RVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDT 169
Query: 566 EFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLS-KSPRRS 390
EF+N ++R IRVK+Y SRS SRSRSRSR S S SRS SP+K S +S RS
Sbjct: 170 EFKNAFSRAPIRVKEYAGKSSRSYSRSRSRSR------SGSYSRSPSPKKKPSRRSASRS 223
Query: 389 LSRSLSKSRSPSPDRKKSPPRAMSRSRS 306
SRS+S S S SP +++SP R+ ++SRS
Sbjct: 224 RSRSVS-SHSRSPSKERSPSRSPAKSRS 250
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis
vinifera]
Length = 720
Score = 188 bits (477), Expect = 2e-045
Identities = 102/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = -3
Query: 836 GGGGYRGGGGGGYGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAE 657
GG G+ G R G SR SE+RV+V GLPSSASWQDLKDHMR+AGDVCF++
Sbjct: 82 GGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 141
Query: 656 VTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGYIRVKKYESSQSRSPSRSRSR 477
V D GT G+VDYTNYDDMK+AIRKLDD+EFRN ++R Y+RVK+Y+SS+S S SRSRS
Sbjct: 142 VFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSSRSFSRSRSRSY 201
Query: 476 SRGRGRSPSRSVSRSRSPRKDLSKSPRRSLSRSLSKSRS-PSPDRKKSPPRAMS 318
SRG+ S SRS SRS S + SKSP+ SR S+SRS S S PR++S
Sbjct: 202 SRGKSASRSRSRSRSYSRSRSQSKSPKAKSSRR-SRSRSVSSRSHSGSKPRSLS 254
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,672,520,567,077
Number of Sequences: 15229318
Number of Extensions: 2672520567077
Number of Successful Extensions: 649898909
Number of sequences better than 0.0: 0
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