BLASTX 7.6.2
Query= UN22287 /QuerySize=1193
(1192 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsi... 345 6e-094
sp|Q6DII2|SFRS1_XENTR Splicing factor, arginine/serine-rich 1 OS... 256 3e-067
sp|Q7SXP4|SFR1A_DANRE Splicing factor, arginine/serine-rich 1A O... 250 1e-065
sp|Q9NEW6|RSP3_CAEEL Probable splicing factor, arginine/serine-r... 244 1e-063
sp|Q6NYA0|SFR1B_DANRE Splicing factor, arginine/serine-rich 1B O... 151 9e-036
sp|Q0VCY7|SFRS1_BOVIN Splicing factor, arginine/serine-rich 1 OS... 149 6e-035
sp|Q07955|SFRS1_HUMAN Splicing factor, arginine/serine-rich 1 OS... 149 6e-035
sp|Q6PDM2|SFRS1_MOUSE Splicing factor, arginine/serine-rich 1 OS... 149 6e-035
sp|Q3YLA6|SFRS1_PIG Splicing factor, arginine/serine-rich 1 OS=S... 149 6e-035
sp|Q5R7H2|SFRS1_PONAB Splicing factor, arginine/serine-rich 1 OS... 148 1e-034
sp|Q5ZML3|SFRS1_CHICK Splicing factor, arginine/serine-rich 1 OS... 127 1e-028
sp|Q13242|SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 OS... 114 1e-024
>sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana
GN=SF2 PE=1 SV=1
Length = 303
Score = 345 bits (883), Expect = 6e-094
Identities = 187/289 (64%), Positives = 220/289 (76%), Gaps = 10/289 (3%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R SR++YVGNLPGDIRE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGG-GGGYGGGGGSARFGVSRH 756
AI GRDGY+FDG RLRVELAHGGR +SS D R G + GGG GGG G G G +R G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTR--GSFNGGGRGGGRGRGDGGSR-GPSRR 116
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT Y+DMKYA++KL
Sbjct: 117 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 176
Query: 575 DDTEFRNPWARGYIRVKKYES-SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DDTEFRN ++ GY+RV++Y+S SRSPSR RS S+ R RS RSVSRSRS + S+SP
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 398 RRSLSR---SLSKSRSPSPDRKKSPPRAMSRSRSRSLSKSPAKVQEGTE 261
+ SR + S SRSP P R KS + RSRSRS S P+ +EG++
Sbjct: 237 KAKSSRRSPAKSTSRSPGP-RSKSRSPSPRRSRSRSRSPLPSVQKEGSK 284
>sp|Q6DII2|SFRS1_XENTR Splicing factor, arginine/serine-rich 1 OS=Xenopus
tropicalis GN=sfrs1 PE=2 SV=1
Length = 267
Score = 256 bits (652), Expect = 3e-067
Identities = 152/255 (59%), Positives = 177/255 (69%), Gaps = 17/255 (6%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAH-----GGRGQSSGDRRGGGGYRGGGGGGYGGGGGSA---RFG-VSRH 756
++DG RLRVE GGRG G GGGG GGGGGG GGGGG A R+G SR
Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
SE+RV+V GLP S SWQDLKDHMR+AGDVC+A+V R DGT GVV++ +DM YA+RKL
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGT-GVVEFVRKEDMTYAVRKL 194
Query: 575 DDTEFR-NPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR--SPRKDLSK 405
D+T+FR + YIRV K + +S S RSRSRSR R RS SRS SRSR SPR+
Sbjct: 195 DNTKFRSHEGETAYIRV-KVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRG- 252
Query: 404 SPRRSLSRSLSKSRS 360
SPR S S S+SR+
Sbjct: 253 SPRYSPRHSRSRSRT 267
Score = 169 bits (426), Expect = 6e-041
Identities = 107/190 (56%), Positives = 123/190 (64%), Gaps = 14/190 (7%)
Frame = -3
Query: 917 DGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSA---RFG-VSRHSE 750
DGY R GGRG G GGGG GGGGGG GGGGG A R+G SR SE
Sbjct: 80 DGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSE 139
Query: 749 FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD 570
+RV+V GLP S SWQDLKDHMR+AGDVC+A+V R DGT GVV++ +DM YA+RKLD+
Sbjct: 140 YRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGT-GVVEFVRKEDMTYAVRKLDN 196
Query: 569 TEFR-NPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR--SPRKDLSK-- 405
T+FR + YIRV K + +S S RSRSRSR R RS SRS SRSR SPR+
Sbjct: 197 TKFRSHEGETAYIRV-KVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPR 255
Query: 404 -SPRRSLSRS 378
SPR S SRS
Sbjct: 256 YSPRHSRSRS 265
>sp|Q7SXP4|SFR1A_DANRE Splicing factor, arginine/serine-rich 1A OS=Danio rerio
GN=sfrs1a PE=2 SV=2
Length = 257
Score = 250 bits (638), Expect = 1e-065
Identities = 146/246 (59%), Positives = 170/246 (69%), Gaps = 12/246 (4%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE PRDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVR 732
++DG RLRVE GRG G GGGG GGGGGG GGG R+G SR SE+RVIV
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGG-GGGGGGGGGGGAPRGRYGPPSRRSEYRVIVS 135
Query: 731 GLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-N 555
GLP S SWQDLKDHMR+AGDVC+A+V R DGT GVV++ +DM YA+RKLD+T+FR +
Sbjct: 136 GLPPSGSWQDLKDHMREAGDVCYADVFR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSH 192
Query: 554 PWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR--SPRKDLSK---SPRRS 390
YIRV K + +S S RSRSRSR R RS SRS +RSR SPR+ SPR S
Sbjct: 193 EGETAYIRV-KVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSRGSPQYSPRHS 251
Query: 389 LSRSLS 372
SRS S
Sbjct: 252 RSRSRS 257
>sp|Q9NEW6|RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3
OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2
Length = 258
Score = 244 bits (621), Expect = 1e-063
Identities = 136/259 (52%), Positives = 165/259 (63%), Gaps = 19/259 (7%)
Frame = -3
Query: 1106 GRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAI 927
G + +YVGNLPGD+RE E+ED+F+KYGRI +++K R P + FVEFE RDAEDA+
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAV 63
Query: 926 DGRDGYNFDGSRLRVELAH-------GGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFG 768
RDGY FDG R+RVE GGR G GG +RGG GGG GG G
Sbjct: 64 RARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGG-------G 116
Query: 767 VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYA 588
R + +RVIV GLP + SWQDLKDHMR AGDVC+A+V R DGT GVV++T Y+D+KYA
Sbjct: 117 PQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVAR--DGT-GVVEFTRYEDVKYA 173
Query: 587 IRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDL 411
+RKLDDT+FR + YIRV++ SS S R RSR R R S SPR+
Sbjct: 174 VRKLDDTKFRSHEGETAYIRVREDNSSGGGSGGGGRDRSRSRSPRAERRASPKYSPRRSR 233
Query: 410 SKSPRRSLSRSLSKSRSPS 354
S+S RS SRS S SRSPS
Sbjct: 234 SRSRSRSRSRSRSASRSPS 252
>sp|Q6NYA0|SFR1B_DANRE Splicing factor, arginine/serine-rich 1B OS=Danio rerio
GN=sfrs1b PE=2 SV=1
Length = 245
Score = 151 bits (381), Expect = 9e-036
Identities = 94/160 (58%), Positives = 109/160 (68%), Gaps = 10/160 (6%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G GG RGGGGGG G G R+G SR SE+RVIV GLP S SWQDLKDHMR+AGDVC
Sbjct: 89 RSGRGGGRGGGGGG-GVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVC 147
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSR 489
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRV K + +S S R
Sbjct: 148 YADVFR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-KVDGPRSPSYGR 203
Query: 488 SRSRSRGRGRSPSRSVSRSRSPRKDLSK---SPRRSLSRS 378
SRSRSR R RS S S SRS SPR+ SPR S SRS
Sbjct: 204 SRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 243
Score = 130 bits (326), Expect = 2e-029
Identities = 98/239 (41%), Positives = 121/239 (50%), Gaps = 22/239 (9%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARF-----GVSRHSEFR 744
++DG RLRVE GRG G GGGG G G YG + + G+ ++
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGG--GGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQ 134
Query: 743 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTE 564
+ + A D R V E R D TY V D+ K+ + +
Sbjct: 135 DL-KDHMREAGDVCYADVFRDGTGV--VEFVRKEDMTYAV---RKLDNTKFRSHEGETAY 188
Query: 563 FR----NPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR-SPRKDLSKS 402
R P + Y R + S+SRS SRSRS SR R SP RS R SPR S+S
Sbjct: 189 IRVKVDGPRSPSYGRSR----SRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 243
>sp|Q0VCY7|SFRS1_BOVIN Splicing factor, arginine/serine-rich 1 OS=Bos taurus
GN=SFRS1 PE=2 SV=1
Length = 248
Score = 149 bits (374), Expect = 6e-035
Identities = 95/162 (58%), Positives = 110/162 (67%), Gaps = 12/162 (7%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G G RGGGGGG GGG R+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC
Sbjct: 90 RSGRGTGRGGGGGG-GGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC 148
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSR 489
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRV K + +S S R
Sbjct: 149 YADVYR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-KVDGPRSPSYGR 204
Query: 488 SRSRSRGRGRSPSRSVSRSR--SPRKDLSK---SPRRSLSRS 378
SRSRSR R RS SRS SRSR SPR+ SPR S SRS
Sbjct: 205 SRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 246
Score = 134 bits (337), Expect = 1e-030
Identities = 105/241 (43%), Positives = 123/241 (51%), Gaps = 24/241 (9%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSR-------HSE 750
++DG RLRVE GRG G GGGG GGGG G G +R +R S
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRG---GGGG--GGGGAPRGRYGPPSRRSENRVVVSGLPPSG 132
Query: 749 FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD 570
++ A D R V E R D TY V D+ K+ + +
Sbjct: 133 SWQDLKDHMREAGDVCYADVYRDGTGV--VEFVRKEDMTYAV---RKLDNTKFRSHE-GE 186
Query: 569 TEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR-----SPRKDLSK 405
T + G R Y S+SRS SRSRSRSR RS S S RSR SPR S+
Sbjct: 187 TAYIRVKVDG-PRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSR 245
Query: 404 S 402
S
Sbjct: 246 S 246
>sp|Q07955|SFRS1_HUMAN Splicing factor, arginine/serine-rich 1 OS=Homo sapiens
GN=SFRS1 PE=1 SV=2
Length = 248
Score = 149 bits (374), Expect = 6e-035
Identities = 95/162 (58%), Positives = 110/162 (67%), Gaps = 12/162 (7%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G G RGGGGGG GGG R+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC
Sbjct: 90 RSGRGTGRGGGGGG-GGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC 148
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSR 489
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRV K + +S S R
Sbjct: 149 YADVYR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-KVDGPRSPSYGR 204
Query: 488 SRSRSRGRGRSPSRSVSRSR--SPRKDLSK---SPRRSLSRS 378
SRSRSR R RS SRS SRSR SPR+ SPR S SRS
Sbjct: 205 SRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 246
Score = 134 bits (337), Expect = 1e-030
Identities = 105/241 (43%), Positives = 123/241 (51%), Gaps = 24/241 (9%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSR-------HSE 750
++DG RLRVE GRG G GGGG GGGG G G +R +R S
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRG---GGGG--GGGGAPRGRYGPPSRRSENRVVVSGLPPSG 132
Query: 749 FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD 570
++ A D R V E R D TY V D+ K+ + +
Sbjct: 133 SWQDLKDHMREAGDVCYADVYRDGTGV--VEFVRKEDMTYAV---RKLDNTKFRSHE-GE 186
Query: 569 TEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR-----SPRKDLSK 405
T + G R Y S+SRS SRSRSRSR RS S S RSR SPR S+
Sbjct: 187 TAYIRVKVDG-PRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSR 245
Query: 404 S 402
S
Sbjct: 246 S 246
>sp|Q6PDM2|SFRS1_MOUSE Splicing factor, arginine/serine-rich 1 OS=Mus musculus
GN=Sfrs1 PE=1 SV=3
Length = 248
Score = 149 bits (374), Expect = 6e-035
Identities = 95/162 (58%), Positives = 110/162 (67%), Gaps = 12/162 (7%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G G RGGGGGG GGG R+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC
Sbjct: 90 RSGRGTGRGGGGGG-GGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC 148
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSR 489
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRV K + +S S R
Sbjct: 149 YADVYR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-KVDGPRSPSYGR 204
Query: 488 SRSRSRGRGRSPSRSVSRSR--SPRKDLSK---SPRRSLSRS 378
SRSRSR R RS SRS SRSR SPR+ SPR S SRS
Sbjct: 205 SRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 246
Score = 134 bits (337), Expect = 1e-030
Identities = 105/241 (43%), Positives = 123/241 (51%), Gaps = 24/241 (9%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSR-------HSE 750
++DG RLRVE GRG G GGGG GGGG G G +R +R S
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRG---GGGG--GGGGAPRGRYGPPSRRSENRVVVSGLPPSG 132
Query: 749 FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD 570
++ A D R V E R D TY V D+ K+ + +
Sbjct: 133 SWQDLKDHMREAGDVCYADVYRDGTGV--VEFVRKEDMTYAV---RKLDNTKFRSHE-GE 186
Query: 569 TEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR-----SPRKDLSK 405
T + G R Y S+SRS SRSRSRSR RS S S RSR SPR S+
Sbjct: 187 TAYIRVKVDG-PRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSR 245
Query: 404 S 402
S
Sbjct: 246 S 246
>sp|Q3YLA6|SFRS1_PIG Splicing factor, arginine/serine-rich 1 OS=Sus scrofa
GN=SFRS1 PE=2 SV=3
Length = 248
Score = 149 bits (374), Expect = 6e-035
Identities = 95/162 (58%), Positives = 110/162 (67%), Gaps = 12/162 (7%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G G RGGGGGG GGG R+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC
Sbjct: 90 RSGRGTGRGGGGGG-GGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC 148
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSR 489
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRV K + +S S R
Sbjct: 149 YADVYR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-KVDGPRSPSYGR 204
Query: 488 SRSRSRGRGRSPSRSVSRSR--SPRKDLSK---SPRRSLSRS 378
SRSRSR R RS SRS SRSR SPR+ SPR S SRS
Sbjct: 205 SRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 246
Score = 134 bits (337), Expect = 1e-030
Identities = 105/241 (43%), Positives = 123/241 (51%), Gaps = 24/241 (9%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSR-------HSE 750
++DG RLRVE GRG G GGGG GGGG G G +R +R S
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRG---GGGG--GGGGAPRGRYGPPSRRSENRVVVSGLPPSG 132
Query: 749 FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD 570
++ A D R V E R D TY V D+ K+ + +
Sbjct: 133 SWQDLKDHMREAGDVCYADVYRDGTGV--VEFVRKEDMTYAV---RKLDNTKFRSHE-GE 186
Query: 569 TEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR-----SPRKDLSK 405
T + G R Y S+SRS SRSRSRSR RS S S RSR SPR S+
Sbjct: 187 TAYIRVKVDG-PRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSR 245
Query: 404 S 402
S
Sbjct: 246 S 246
>sp|Q5R7H2|SFRS1_PONAB Splicing factor, arginine/serine-rich 1 OS=Pongo abelii
GN=SFRS1 PE=2 SV=3
Length = 248
Score = 148 bits (372), Expect = 1e-034
Identities = 94/161 (58%), Positives = 107/161 (66%), Gaps = 10/161 (6%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G G RGGGGGG GGG R+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC
Sbjct: 90 RSGRGTGRGGGGGG-GGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC 148
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVK-KYESSQSRSPS 492
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRVK S S S
Sbjct: 149 YADVYR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRS 205
Query: 491 RSRSRSRGRGRSPSRSVSRSRSPRKDLSK---SPRRSLSRS 378
RSRSRSR R RS S S SRS SPR+ SPR S SRS
Sbjct: 206 RSRSRSRSRNRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRS 246
Score = 133 bits (334), Expect = 3e-030
Identities = 104/241 (43%), Positives = 123/241 (51%), Gaps = 24/241 (9%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSR-------HSE 750
++DG RLRVE GRG G GGGG GGGG G G +R +R S
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRG---GGGG--GGGGAPRGRYGPPSRRSENRVVVSGLPPSG 132
Query: 749 FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD 570
++ A D R V E R D TY V D+ K+ + +
Sbjct: 133 SWQDLKDHMREAGDVCYADVYRDGTGV--VEFVRKEDMTYAV---RKLDNTKFRSHE-GE 186
Query: 569 TEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSR-----SPRKDLSK 405
T + G R Y S+SRS SRSR+RSR RS S S RSR SPR S+
Sbjct: 187 TAYIRVKVDG-PRSPSYGRSRSRSRSRSRNRSRSNSRSRSYSPRRSRGSPRYSPRHSRSR 245
Query: 404 S 402
S
Sbjct: 246 S 246
>sp|Q5ZML3|SFRS1_CHICK Splicing factor, arginine/serine-rich 1 OS=Gallus gallus
GN=SFRS1 PE=1 SV=3
Length = 257
Score = 127 bits (319), Expect = 1e-028
Identities = 76/126 (60%), Positives = 88/126 (69%), Gaps = 9/126 (7%)
Frame = -3
Query: 842 RRGGGGYRGGGGGGYGGGGGSARFG-VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 666
R G G RGGGGGG GGG R+G SR SE+RVIV GLP S SWQDLKDHMR+AGDVC
Sbjct: 90 RSGRGTGRGGGGGG-GGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVC 148
Query: 665 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSR 489
+A+V R DGT GVV++ +DM YA+RKLD+T+FR + YIRVK RSPS
Sbjct: 149 YADVFR--DGT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK---VDGPRSPSY 202
Query: 488 SRSRSR 471
RSRSR
Sbjct: 203 GRSRSR 208
Score = 117 bits (293), Expect = 1e-025
Identities = 63/102 (61%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Frame = -3
Query: 1088 IYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAEDAIDGRDGY 909
IYVGNLP DIR +IED+FYKYG I DI+LK P + FVEFE PRDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 908 NFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGG 783
++DG RLRVE GRG RGGGG GGGGG G G
Sbjct: 78 DYDGYRLRVEFPRSGRGTG----RGGGG--GGGGGAPRGRYG 113
>sp|Q13242|SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 OS=Homo sapiens
GN=SFRS9 PE=1 SV=1
Length = 221
Score = 114 bits (285), Expect = 1e-024
Identities = 69/124 (55%), Positives = 84/124 (67%), Gaps = 10/124 (8%)
Frame = -3
Query: 800 YGGGGGSARFG----VSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGT 633
YGG GG R G +R S+FRV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 90 YGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--- 146
Query: 632 YGVVDYTNYDDMKYAIRKLDDTEFR-NPWARGYIRVKKYESSQSRSPSRSRSRSRGRGRS 456
G+V+Y +DM+YA+RKLDDT+FR + YIRV E S S SRSRS SRGR S
Sbjct: 147 VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP-ERSTSYGYSRSRSGSRGRD-S 204
Query: 455 PSRS 444
P +S
Sbjct: 205 PYQS 208
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,892,683,958
Number of Sequences: 518415
Number of Extensions: 92892683958
Number of Successful Extensions: 611291351
Number of sequences better than 0.0: 0
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