BLASTX 7.6.2
Query= UN22287 /QuerySize=1193
(1192 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 503 1e-142
TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 439 2e-123
TAIR9_protein||AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 345 5e-095
TAIR9_protein||AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 345 5e-095
TAIR9_protein||AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 334 7e-092
TAIR9_protein||AT4G02430.2 | Symbols: | pre-mRNA splicing facto... 321 8e-088
TAIR9_protein||AT4G02430.1 | Symbols: | pre-mRNA splicing facto... 253 3e-067
TAIR9_protein||AT1G09140.1 | Symbols: | SF2/ASF-like splicing m... 173 2e-043
TAIR9_protein||AT1G09140.2 | Symbols: | SF2/ASF-like splicing m... 161 1e-039
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 62 5e-010
>TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334829 FORWARD
Length = 301
Score = 503 bits (1293), Expect = 1e-142
Identities = 258/299 (86%), Positives = 267/299 (89%), Gaps = 16/299 (5%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYN DG RLRVELAHGGRGQSS DRRGG G G G GG GGGGGSARFGVSRHS
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 572 DTEFRNPWARGYIRVKKYES--------SQSRSPSRSRSRSRGRGR--SPSRSVSRSRSP 423
DTEFRNPWARG+IRVKKYES S+SRS SRSRSRSRGRGR S SRS+SRS+SP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240
Query: 422 RKDLSKSPRRSLSRSLSKSRSPSPDRKKSPPRAM------SRSRSRSLSKSPAKVQEGT 264
RKDLSKSPRRSLSRS+SKSRSPSPD+KKSPPRAM SRSRSRS SKSP KV+EG+
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSRSRSRSPSKSPPKVREGS 299
>TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334617 FORWARD
Length = 298
Score = 439 bits (1128), Expect = 2e-123
Identities = 222/274 (81%), Positives = 232/274 (84%), Gaps = 2/274 (0%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MSGRFSRSIYVGNLPGDIRE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGYN DG RLRVELAHGGRGQSS DRRGG G G G GG GGGGGSARFGVSRHS
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 572 DTEFRNPWARGYIRVKKYES--SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DTEFRNPWARG+IRVKKYES S+SRSPSRSRSRSR R RS R S SRS SKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240
Query: 398 RRSLSRSLSKSRSPSPDRKKSPPRAMSRSRSRSL 297
R+ LS+S +S S S + +SP +S R +
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRQV 274
Score = 104 bits (259), Expect = 1e-022
Identities = 56/71 (78%), Positives = 62/71 (87%), Gaps = 2/71 (2%)
Frame = -3
Query: 533 RVKKYESSQSRSPSRSRSRSRGRGR--SPSRSVSRSRSPRKDLSKSPRRSLSRSLSKSRS 360
R + S+SRS SRSRSRSRGRGR S SRS+SRS+SPRKDLSKSPRRSLSRS+SKSRS
Sbjct: 202 RSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRS 261
Query: 359 PSPDRKKSPPR 327
PSPD+KKSPPR
Sbjct: 262 PSPDKKKSPPR 272
>TAIR9_protein||AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-629583 FORWARD
Length = 304
Score = 345 bits (883), Expect = 5e-095
Identities = 187/289 (64%), Positives = 220/289 (76%), Gaps = 10/289 (3%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R SR++YVGNLPGDIRE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGG-GGGYGGGGGSARFGVSRH 756
AI GRDGY+FDG RLRVELAHGGR +SS D R G + GGG GGG G G G +R G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTR--GSFNGGGRGGGRGRGDGGSR-GPSRR 116
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT Y+DMKYA++KL
Sbjct: 117 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 176
Query: 575 DDTEFRNPWARGYIRVKKYES-SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DDTEFRN ++ GY+RV++Y+S SRSPSR RS S+ R RS RSVSRSRS + S+SP
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 398 RRSLSR---SLSKSRSPSPDRKKSPPRAMSRSRSRSLSKSPAKVQEGTE 261
+ SR + S SRSP P R KS + RSRSRS S P+ +EG++
Sbjct: 237 KAKSSRRSPAKSTSRSPGP-RSKSRSPSPRRSRSRSRSPLPSVQKEGSK 284
>TAIR9_protein||AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-629583 FORWARD
Length = 304
Score = 345 bits (883), Expect = 5e-095
Identities = 187/289 (64%), Positives = 220/289 (76%), Gaps = 10/289 (3%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R SR++YVGNLPGDIRE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGG-GGGYGGGGGSARFGVSRH 756
AI GRDGY+FDG RLRVELAHGGR +SS D R G + GGG GGG G G G +R G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTR--GSFNGGGRGGGRGRGDGGSR-GPSRR 116
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT Y+DMKYA++KL
Sbjct: 117 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 176
Query: 575 DDTEFRNPWARGYIRVKKYES-SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DDTEFRN ++ GY+RV++Y+S SRSPSR RS S+ R RS RSVSRSRS + S+SP
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 398 RRSLSR---SLSKSRSPSPDRKKSPPRAMSRSRSRSLSKSPAKVQEGTE 261
+ SR + S SRSP P R KS + RSRSRS S P+ +EG++
Sbjct: 237 KAKSSRRSPAKSTSRSPGP-RSKSRSPSPRRSRSRSRSPLPSVQKEGSK 284
>TAIR9_protein||AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-628995 FORWARD
Length = 286
Score = 334 bits (856), Expect = 7e-092
Identities = 179/272 (65%), Positives = 209/272 (76%), Gaps = 12/272 (4%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R SR++YVGNLPGDIRE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGG-GGGYGGGGGSARFGVSRH 756
AI GRDGY+FDG RLRVELAHGGR +SS D R G + GGG GGG G G G +R G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTR--GSFNGGGRGGGRGRGDGGSR-GPSRR 116
Query: 755 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 576
SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT Y+DMKYA++KL
Sbjct: 117 SEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKL 176
Query: 575 DDTEFRNPWARGYIRVKKYES-SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSP 399
DDTEFRN ++ GY+RV++Y+S SRSPSR RS S+ R RS RSVSRSRS + S+SP
Sbjct: 177 DDTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 398 RRSLSRSLSKSRSPSPDRKKSP-PRAMSRSRS 306
+ SR RSP+ +SP PR+ SRS S
Sbjct: 237 KAKSSR-----RSPAKSTSRSPGPRSKSRSPS 263
>TAIR9_protein||AT4G02430.2 | Symbols: | pre-mRNA splicing factor, putative /
SR1 protein, putative | chr4:1069186-1071313 FORWARD
Length = 279
Score = 321 bits (821), Expect = 8e-088
Identities = 177/270 (65%), Positives = 208/270 (77%), Gaps = 12/270 (4%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R SR+IYVGNLPGDIRE E+EDLF KYG +V I+LK+PPRPP Y FVEFE RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGY+FDG LRVELAHGGR +SS D RG RG GG G G GGG R G SR S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRER-GPSRRS 118
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 573
E+RV+V GLPSSASWQDLKDHMRK G+VCF++V RD GT G+VDYT+Y+DMKYA LD
Sbjct: 119 EYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LD 175
Query: 572 DTEFRNPWARGYIRVKKYESSQ-SRSPSRSR--SRSRGRGRSPSRSVSRSRSPRKDLSKS 402
DTEFRN ++ Y+RV++Y+S + SRSPSR R S+SR RGRSPSRS SRSRS K S+S
Sbjct: 176 DTEFRNAFSHEYVRVREYDSRRDSRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSK--SRS 233
Query: 401 PR-RSLSRSLSKSRSPSP-DRKKSPPRAMS 318
P+ +SL RS +KS S SP R +S R++S
Sbjct: 234 PKAKSLRRSPAKSTSRSPRSRSRSKSRSLS 263
>TAIR9_protein||AT4G02430.1 | Symbols: | pre-mRNA splicing factor, putative /
SR1 protein, putative | chr4:1069186-1070543 FORWARD
Length = 179
Score = 253 bits (644), Expect = 3e-067
Identities = 126/178 (70%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R SR+IYVGNLPGDIRE E+EDLF KYG +V I+LK+PPRPP Y FVEFE RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGY+FDG LRVELAHGGR +SS D RG RG GG G G GGG R G SR S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRER-GPSRRS 118
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRK 579
E+RV+V GLPSSASWQDLKDHMRK G+VCF++V RD GT G+VDYT+Y+DMKYAI+K
Sbjct: 119 EYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 176
>TAIR9_protein||AT1G09140.1 | Symbols: | SF2/ASF-like splicing modulator
(SRP30) | chr1:2942887-2945818 REVERSE
Length = 269
Score = 173 bits (438), Expect = 2e-043
Identities = 104/166 (62%), Positives = 118/166 (71%), Gaps = 6/166 (3%)
Frame = -3
Query: 782 SARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYD 603
SA SR S++RV+V GLP SASWQDLKDHMRKAGDVCF+EV D G GVVDY+NYD
Sbjct: 98 SASRAPSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYD 157
Query: 602 DMKYAIRKLDDTEFRNPWARGYIRVKKYES-SQSRSPSRSRS-RSRGRGRSPSRSV-SRS 432
DMKYAIRKLD TEFRN ++ YIRV++YES S SRSP S+S RSR R R PS S S+S
Sbjct: 158 DMKYAIRKLDATEFRNAFSSAYIRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKS 217
Query: 431 RSPRKDLSKSPRRSLSRSLSKSRSPSPDRKKSPPRAMSRSRSRSLS 294
RS S SPR SR LS+SRS +S R+ SRSRSRS S
Sbjct: 218 RSVSPARSISPR---SRPLSRSRSLYSSVSRSQSRSKSRSRSRSNS 260
Score = 161 bits (407), Expect = 8e-040
Identities = 111/264 (42%), Positives = 149/264 (56%), Gaps = 7/264 (2%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R++R+IYVGNLPGDIR+ E+EDLFYKYG IVDI+LK+PPRPP Y FVEFE PRDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGY+FDG RLRVE+AHGGR S R Y G+ +
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGV--VDYTNY-DDMKYAIR 582
++ + + + + + G + + D Y + +D T + + A
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 581 KLDDTEFRNPWARGYIRVKKYES-SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSK 405
++ + E R+ +R K Y S S+SR PS S S S+ R SP+RS+S RS S+
Sbjct: 181 RVREYESRSV-SRSPDDSKSYRSRSRSRGPSCSYS-SKSRSVSPARSIS-PRSRPLSRSR 237
Query: 404 SPRRSLSRSLSKSRSPSPDRKKSP 333
S S+SRS S+S+S S R SP
Sbjct: 238 SLYSSVSRSQSRSKSRSRSRSNSP 261
>TAIR9_protein||AT1G09140.2 | Symbols: | SF2/ASF-like splicing modulator
(SRP30) | chr1:2943528-2945818 REVERSE
Length = 257
Score = 161 bits (406), Expect = 1e-039
Identities = 94/144 (65%), Positives = 106/144 (73%), Gaps = 6/144 (4%)
Frame = -3
Query: 782 SARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYD 603
SA SR S++RV+V GLP SASWQDLKDHMRKAGDVCF+EV D G GVVDY+NYD
Sbjct: 98 SASRAPSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYD 157
Query: 602 DMKYAIRKLDDTEFRNPWARGYIRVKKYES-SQSRSPSRSRS-RSRGRGRSPSRSV-SRS 432
DMKYAIRKLD TEFRN ++ YIRV++YES S SRSP S+S RSR R R PS S S+S
Sbjct: 158 DMKYAIRKLDATEFRNAFSSAYIRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKS 217
Query: 431 RSPRKDLSKSPRRSLSRSLSKSRS 360
RS S SPR SR LS+SRS
Sbjct: 218 RSVSPARSISPR---SRPLSRSRS 238
Score = 152 bits (383), Expect = 5e-037
Identities = 107/255 (41%), Positives = 144/255 (56%), Gaps = 11/255 (4%)
Frame = -3
Query: 1112 MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHPRDAED 933
MS R++R+IYVGNLPGDIR+ E+EDLFYKYG IVDI+LK+PPRPP Y FVEFE PRDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 932 AIDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGGGYRGGGGGGYGGGGGSARFGVSRHS 753
AI GRDGY+FDG RLRVE+AHGGR S R Y G+ +
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 752 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGV--VDYTNY-DDMKYAIR 582
++ + + + + + G + + D Y + +D T + + A
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 581 KLDDTEFRNPWARGYIRVKKYES-SQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSK 405
++ + E R+ +R K Y S S+SR PS S S S+ R SP+RS+S P LS+
Sbjct: 181 RVREYESRSV-SRSPDDSKSYRSRSRSRGPSCSYS-SKSRSVSPARSISPRSRP---LSR 235
Query: 404 SPRRSLSRSLSKSRS 360
S RSL S+S+S S
Sbjct: 236 S--RSLYSSVSRSGS 248
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 62 bits (150), Expect = 5e-010
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Frame = -3
Query: 533 RVKKYESSQSRSPSRSRSRSRGRGRSPSRSVSRSRSPRKDLSKSPRRSLSRSLSKSRSPS 354
R ++Y+ +S S S + SRGR +P R SRS SP SPRRS+SRS +SRSPS
Sbjct: 179 REERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSP------SPRRSISRSPRRSRSPS 232
Query: 353 PDRKK--SPPRAMSRSRSRSLS 294
P R + SP R++SRS RS S
Sbjct: 233 PKRNRSVSPRRSISRSPRRSRS 254
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,564,658,743
Number of Sequences: 33410
Number of Extensions: 11564658743
Number of Successful Extensions: 375709350
Number of sequences better than 0.0: 0
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