BLASTX 7.6.2
Query= UN22355 /QuerySize=1780
(1779 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20600.1 | Symbols: | FUNCTIONS IN: molecular... 798 3e-231
TAIR9_protein||AT3G22142.1 | Symbols: | structural constituent ... 56 6e-008
TAIR9_protein||AT2G28440.1 | Symbols: | proline-rich family pro... 49 7e-006
>TAIR9_protein||AT5G20600.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small
subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING:
13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52
(InterPro:IPR010301); Has 444 Blast hits to 431 proteins in 151
species: Archae - 0; Bacteria - 10; Metazoa - 196; Fungi - 114; Plants
- 27; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). |
chr5:6966345-6967943 REVERSE
Length = 533
Score = 798 bits (2059), Expect = 3e-231
Identities = 419/544 (77%), Positives = 466/544 (85%), Gaps = 23/544 (4%)
Frame = -3
Query: 1759 VKRKQLSEAPQQQQQQPSPAEENCKSLIKKLASCKQTIRDRSLRTLLRTWLPEQTSIPDE 1580
VKR ++ A +Q P EE+CKSLIKKLASCKQ+IRDRSLRT+LRTWLPEQT I DE
Sbjct: 2 VKRNRVPPA-----EQALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDE 56
Query: 1579 DMRKLWQGIFYCMWHADKSLYQSQLIDRLSAALHSLPLPLSVHYFAVFLFTMRREWSRID 1400
DM+KLWQGIFYC+WHADKSLYQS+LIDRLS+AL SLPLPLS+HYF VFLFTMRREWSRID
Sbjct: 57 DMKKLWQGIFYCVWHADKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRID 116
Query: 1399 RLRLDKFYLLIRRFLHGLFALVDSSSWDLDLTRRLVGVLFDGTFLAGDKFQGNGVNYHVA 1220
RLRLDKFYLLIRRFLHG F+L+DS+SWDL+ TRRL+G+LFDGT LA DKFQGNGVNYH+
Sbjct: 117 RLRLDKFYLLIRRFLHGFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHIT 176
Query: 1219 SVFVEEVRSFLPLRKEVLEILFVPFVRVMGVVSDKVLVGKIKSNLFDELLKMGKRLVDVK 1040
S FVEE+R FLPLRKEVLE+LF PFV++MGVV+DK+LVGKIKSNLFDELLKMGK+L+ +K
Sbjct: 177 SAFVEELRPFLPLRKEVLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIK 236
Query: 1039 KSGDGDDEGVAEDDDVVVLGSIALSMEFGKRFYEMGSSPDCHQGNRKVIFALHKEFLQLE 860
+SG D+ V EDDDVVVLGSIALSMEF KRFYE+GSSP+CHQGNRK+IFALHKEFLQLE
Sbjct: 237 QSG---DDAVPEDDDVVVLGSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLE 293
Query: 859 KDMLSSGVVVSITEASR-DKDEVPELVPMTVE--TVVSESKEVVANGSSSKKKKKSLKKC 689
KDM SS + VSI EASR DEVPE VP++ VVS+SK++VANGSSS KKK LKKC
Sbjct: 294 KDMSSSSIEVSIVEASRPGNDEVPESVPVSESNTNVVSKSKKIVANGSSS--KKKGLKKC 351
Query: 688 SNSK----KKGA--DVVVNHGEKDESVDETMISDLREEFEKIASEMGPVKDEVASVCEEA 527
S +K KKGA D VV+ G KDES DETMISDLR+EFEKIASEM P K EVASVC+ A
Sbjct: 352 SKTKKDSVKKGAVMDSVVDLGNKDESFDETMISDLRQEFEKIASEMSPSKSEVASVCDVA 411
Query: 526 EPVPVAIKKNKKRKRENKEVVEQGATVNRDAAEKSLPGPSSEKSSKRVRFAMKNNLVWKP 347
EPV V+ KK KKRKRENK EQ +TVNRDAAE SL GPSSEKSSKRVRFAMKNNLVWKP
Sbjct: 412 EPVSVS-KKTKKRKRENKG-EEQVSTVNRDAAETSLAGPSSEKSSKRVRFAMKNNLVWKP 469
Query: 346 HCPLPPQDLRLPPSATPRGSALKKGIPAGPVRESPSRKTKKKVKPNPRRGVKTIKN--KK 173
HCPLPPQDLR PPSATPRGSALK+GIPAGPVRE SRKTKKKVKP RRGVK+IKN KK
Sbjct: 470 HCPLPPQDLRCPPSATPRGSALKQGIPAGPVRELASRKTKKKVKPAARRGVKSIKNLKKK 529
Query: 172 VSP* 161
+SP*
Sbjct: 530 LSP* 533
>TAIR9_protein||AT3G22142.1 | Symbols: | structural constituent of cell wall |
chr3:7803604-7808046 REVERSE
Length = 1481
Score = 56 bits (134), Expect = 6e-008
Identities = 50/173 (28%), Positives = 65/173 (37%), Gaps = 8/173 (4%)
Frame = +1
Query: 829 KPQHQSSTYPSPTAKTLYEAQISLSYSPDGNQEKNPSHKTSSQTP*TEQ*IPKPQHHHP- 1005
KP S P P A + + P +++P K + P P H HP
Sbjct: 38 KPPKHSVVPPKPPAVKPHPHPKPPTIKPP-PPKRHPHPKPPTVKPHPHPKPPTKPHPHPK 96
Query: 1006 PPLPHHPHPQTS*HQPTSSPS*ATHQTNYS*SSQPKPYH*QPP*PSQKAQTK---SPKPP 1176
PP HPHP+ +P P H + P P P P K TK PKPP
Sbjct: 97 PPTKPHPHPKPPTIKPPPHPKPRPHPKPPNVKPHPHPKPPTKPHPHPKPPTKHHPHPKPP 156
Query: 1177 SSTEETT*PPQRKQTPRGS*PRSPETYPQPETSRRTKHPPTASSDPNPTSSNP 1335
+ + PP K P S P+ P T P P T + H P + P +S P
Sbjct: 157 -TIKPPPKPPSVKPPP--STPKPPTTNPPPSTPQPPTHKPPPCTPTPPVASPP 206
>TAIR9_protein||AT2G28440.1 | Symbols: | proline-rich family protein |
chr2:12161226-12162032 FORWARD
Length = 269
Score = 49 bits (116), Expect = 7e-006
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Frame = +1
Query: 916 GNQEKNPSHKTSS--QTP*TEQ*I-PKPQHHHPPPL-PHHPHPQTS*HQPTSSPS*ATHQ 1083
G QE++PS S + P T+ + P PL P + S P+SSP
Sbjct: 22 GAQEESPSPAAVSPGREPSTDSPLSPSSSPEEDSPLSPSSSPEEDSPLPPSSSPE---ED 78
Query: 1084 TNYS*SSQPKPYH*QPP*PSQKAQTKSPKPPSSTEETT*PPQRKQTPRGS*PRSPETYPQ 1263
+ + SS P+ P PS + SP+PPSS+ E P +P + P+SP + P+
Sbjct: 79 SPLAPSSSPEVD--SPLAPSSSPEVDSPQPPSSSPEADSPLPPSSSPEANSPQSPASSPK 136
Query: 1264 PETSRRTKHPPTASSDPNPTSS 1329
PE+ + PP P SS
Sbjct: 137 PESLADSPSPPPPPPQPESPSS 158
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,607,844,451
Number of Sequences: 33410
Number of Extensions: 11607844451
Number of Successful Extensions: 375721606
Number of sequences better than 0.0: 0
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