BLASTX 7.6.2
Query= UN22362 /QuerySize=1023
(1022 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G16840.3 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 416 1e-116
TAIR9_protein||AT5G16840.1 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 413 2e-115
TAIR9_protein||AT5G16840.2 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 408 4e-114
TAIR9_protein||AT4G17720.1 | Symbols: | RNA recognition motif (... 259 2e-069
TAIR9_protein||AT1G67950.1 | Symbols: | RNA recognition motif (... 195 7e-050
TAIR9_protein||AT1G67950.2 | Symbols: | RNA recognition motif (... 195 7e-050
TAIR9_protein||AT1G67950.3 | Symbols: | RNA recognition motif (... 192 4e-049
TAIR9_protein||AT5G46870.1 | Symbols: | RNA recognition motif (... 181 6e-046
TAIR9_protein||AT1G67950.4 | Symbols: | RNA recognition motif (... 168 7e-042
TAIR9_protein||AT5G32450.1 | Symbols: | RNA recognition motif (... 135 5e-032
TAIR9_protein||AT3G01210.1 | Symbols: | nucleic acid binding / ... 132 3e-031
TAIR9_protein||AT1G14340.1 | Symbols: | RNA recognition motif (... 104 2e-022
>TAIR9_protein||AT5G16840.3 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 258
Score = 416 bits (1068), Expect = 1e-116
Identities = 217/256 (84%), Positives = 233/256 (91%), Gaps = 3/256 (1%)
Frame = +2
Query: 77 MAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEYSAYVTFKDPQGAETAVLLSG 256
MA+RSVKV NLSSGATEH IKEFFSFSGEVESIDIQ NE+SAYVTFK+ QGAETAVLLSG
Sbjct: 1 MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLLSG 60
Query: 257 ASIADQSVIIEMAPNYTPPTAPHTETQSGGGGVAESDAQKAEDVVSSMLAKGFILGKDAV 436
ASIADQSVIIE+APNY+PP APH ETQS G AES QKAEDVVSSMLAKGFILGKDAV
Sbjct: 61 ASIADQSVIIELAPNYSPPAAPHAETQSSG---AESVVQKAEDVVSSMLAKGFILGKDAV 117
Query: 437 GKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSA 616
GKAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS
Sbjct: 118 GKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSV 177
Query: 617 FATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQ 796
+A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q
Sbjct: 178 YAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQ 237
Query: 797 TEHQPPEGYFPIHSFE 844
++ Q PEGY PIHS E
Sbjct: 238 SQQQLPEGYSPIHSSE 253
>TAIR9_protein||AT5G16840.1 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 260
Score = 413 bits (1059), Expect = 2e-115
Identities = 215/254 (84%), Positives = 231/254 (90%), Gaps = 3/254 (1%)
Frame = +2
Query: 83 IRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEYSAYVTFKDPQGAETAVLLSGAS 262
+RSVKV NLSSGATEH IKEFFSFSGEVESIDIQ NE+SAYVTFK+ QGAETAVLLSGAS
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLLSGAS 64
Query: 263 IADQSVIIEMAPNYTPPTAPHTETQSGGGGVAESDAQKAEDVVSSMLAKGFILGKDAVGK 442
IADQSVIIE+APNY+PP APH ETQS G AES QKAEDVVSSMLAKGFILGKDAVGK
Sbjct: 65 IADQSVIIELAPNYSPPAAPHAETQSSG---AESVVQKAEDVVSSMLAKGFILGKDAVGK 121
Query: 443 AKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAFA 622
AKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS +A
Sbjct: 122 AKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYA 181
Query: 623 TAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQTE 802
AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q++
Sbjct: 182 AAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQSQ 241
Query: 803 HQPPEGYFPIHSFE 844
Q PEGY PIHS E
Sbjct: 242 QQLPEGYSPIHSSE 255
>TAIR9_protein||AT5G16840.2 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 261
Score = 408 bits (1047), Expect = 4e-114
Identities = 215/255 (84%), Positives = 231/255 (90%), Gaps = 4/255 (1%)
Frame = +2
Query: 83 IRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQ-GNEYSAYVTFKDPQGAETAVLLSGA 259
+RSVKV NLSSGATEH IKEFFSFSGEVESIDIQ NE+SAYVTFK+ QGAETAVLLSGA
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHSAYVTFKETQGAETAVLLSGA 64
Query: 260 SIADQSVIIEMAPNYTPPTAPHTETQSGGGGVAESDAQKAEDVVSSMLAKGFILGKDAVG 439
SIADQSVIIE+APNY+PP APH ETQS G AES QKAEDVVSSMLAKGFILGKDAVG
Sbjct: 65 SIADQSVIIELAPNYSPPAAPHAETQSSG---AESVVQKAEDVVSSMLAKGFILGKDAVG 121
Query: 440 KAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAF 619
KAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS +
Sbjct: 122 KAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVY 181
Query: 620 ATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQT 799
A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q+
Sbjct: 182 AAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQS 241
Query: 800 EHQPPEGYFPIHSFE 844
+ Q PEGY PIHS E
Sbjct: 242 QQQLPEGYSPIHSSE 256
>TAIR9_protein||AT4G17720.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:9862660-9864498 REVERSE
Length = 314
Score = 259 bits (661), Expect = 2e-069
Identities = 142/237 (59%), Positives = 174/237 (73%), Gaps = 7/237 (2%)
Frame = +2
Query: 77 MAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEYS---AYVTFKDPQGAETAVL 247
M + +VKVSN+S GAT+ +KEFFSFSG++ ++ Q AYVTFKD QGAETAVL
Sbjct: 1 MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60
Query: 248 LSGASIADQSVIIEMAPNY--TPPTAPHTETQSGGGGVAESDA--QKAEDVVSSMLAKGF 415
LSGA+I D SVI+ MAP+Y +P E + D+ +KAEDVVSSMLAKGF
Sbjct: 61 LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120
Query: 416 ILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQV 595
ILGKDA+ KAK+ DEK TSTA+A VAS D+KIG T KI GT +V EK++ VDQ +QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180
Query: 596 TERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKV 766
+E+TKSA A AEQTVS+AG+A+MKNR+VLTG +W GAFN+VAKAA EV QK KEKV
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKV 237
>TAIR9_protein||AT1G67950.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480420 REVERSE
Length = 279
Score = 195 bits (493), Expect = 7e-050
Identities = 109/239 (45%), Positives = 159/239 (66%), Gaps = 14/239 (5%)
Frame = +2
Query: 65 RSISMAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEYS---AYVTFKDPQGAE 235
+S +++VK+SN+S ++ +KEFFSFSG+++ ++++ AYVTFKD QGAE
Sbjct: 22 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 81
Query: 236 TAVLLSGASIADQSVIIEMAPNY-TPPTAPHTETQSGGGGVAESDAQKAEDVVSSMLAKG 412
TA+LL+GA IAD V I A NY PP A +++ G + +KAEDVV+ M+ +G
Sbjct: 82 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS---VKKAEDVVNIMVGRG 138
Query: 413 FILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQ 592
+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+ +Q
Sbjct: 139 YALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQ 198
Query: 593 VTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVE 769
V E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKVE
Sbjct: 199 VREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKVE 250
>TAIR9_protein||AT1G67950.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480072 REVERSE
Length = 280
Score = 195 bits (493), Expect = 7e-050
Identities = 109/239 (45%), Positives = 159/239 (66%), Gaps = 14/239 (5%)
Frame = +2
Query: 65 RSISMAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEYS---AYVTFKDPQGAE 235
+S +++VK+SN+S ++ +KEFFSFSG+++ ++++ AYVTFKD QGAE
Sbjct: 23 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 82
Query: 236 TAVLLSGASIADQSVIIEMAPNY-TPPTAPHTETQSGGGGVAESDAQKAEDVVSSMLAKG 412
TA+LL+GA IAD V I A NY PP A +++ G + +KAEDVV+ M+ +G
Sbjct: 83 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS---VKKAEDVVNIMVGRG 139
Query: 413 FILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQ 592
+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+ +Q
Sbjct: 140 YALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQ 199
Query: 593 VTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVE 769
V E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKVE
Sbjct: 200 VREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKVE 251
>TAIR9_protein||AT1G67950.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480420 REVERSE
Length = 280
Score = 192 bits (486), Expect = 4e-049
Identities = 109/239 (45%), Positives = 157/239 (65%), Gaps = 13/239 (5%)
Frame = +2
Query: 65 RSISMAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQGNEYS---AYVTFKDPQGAE 235
+S +++VK+SN+S ++ +KEFFSFSG+++ ++++ AYVTFKD QGAE
Sbjct: 22 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 81
Query: 236 TAVLLSGASIADQSVIIEMAPNY-TPPTAPHTETQSGGGGVAESDAQKAEDVVSSMLAKG 412
TA+LL+GA IAD V I A NY PP A ++Q +KAEDVV+ M+ +G
Sbjct: 82 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSQE--HSFNGFSVKKAEDVVNIMVGRG 139
Query: 413 FILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQ 592
+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+ +Q
Sbjct: 140 YALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQ 199
Query: 593 VTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVE 769
V E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKVE
Sbjct: 200 VREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKVE 251
>TAIR9_protein||AT5G46870.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:19015486-19016990 FORWARD
Length = 296
Score = 181 bits (459), Expect = 6e-046
Identities = 89/132 (67%), Positives = 110/132 (83%)
Frame = +2
Query: 371 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTS 550
+KAEDVVS M++KGF+LGKDA+ KAK+ DEK TSTA+A V S D++IG T+KI GT+
Sbjct: 110 RKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTT 169
Query: 551 LVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKA 730
+V+EK+K VDQ FQVTE+TKSA A AEQTVS+AG+A+MKNR+VLTG +W GAFNRV+KA
Sbjct: 170 VVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKA 229
Query: 731 AGEVSQKTKEKV 766
A EV QK KEKV
Sbjct: 230 AEEVGQKAKEKV 241
Score = 85 bits (208), Expect = 8e-017
Identities = 48/85 (56%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = +2
Query: 77 MAIRSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQG-NEYS--AYVTFKDPQGAETAVL 247
M++ +VKVSN+S ATE +KEFFSFSG++ ++ Q N+ S AYVTFKD QGAETAVL
Sbjct: 1 MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60
Query: 248 LSGASIADQSVIIEMAPNY-TPPTA 319
L+G++I D SV + M+P+Y PP A
Sbjct: 61 LTGSTIVDSSVTVTMSPDYQLPPDA 85
>TAIR9_protein||AT1G67950.4 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25479778 REVERSE
Length = 220
Score = 168 bits (424), Expect = 7e-042
Identities = 95/191 (49%), Positives = 129/191 (67%), Gaps = 11/191 (5%)
Frame = +2
Query: 200 AYVTFKDPQGAETAVLLSGASIADQSVIIEMAPNY-TPPTAPHTETQSGGGGVAESDAQK 376
AYVTFKD QGAETA+LL+GA IAD V I A NY PP A +++ G + +K
Sbjct: 11 AYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS---VKK 67
Query: 377 AEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLV 556
AEDVV+ M+ +G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V
Sbjct: 68 AEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVV 127
Query: 557 TEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAG 736
EK++ +D+ +QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA
Sbjct: 128 NEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-- 185
Query: 737 EVSQKTKEKVE 769
KEKVE
Sbjct: 186 -----VKEKVE 191
>TAIR9_protein||AT5G32450.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:12079707-12081317 FORWARD
Length = 268
Score = 135 bits (339), Expect = 5e-032
Identities = 66/146 (45%), Positives = 101/146 (69%)
Frame = +2
Query: 326 TETQSGGGGVAESDAQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASI 505
T+T++ G + + KA+DVV+++LAKG LG+DAV KAKAFDEK + A+A V+S
Sbjct: 105 TQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSF 164
Query: 506 DQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLT 685
D+++GLT+K++ G S V EK+K VDQ QV+++T +A AE+ ++ G+AV +R+V
Sbjct: 165 DKRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTA 224
Query: 686 GVSWAAGAFNRVAKAAGEVSQKTKEK 763
G +W +GAF++VA+ KTKEK
Sbjct: 225 GAAWFSGAFSKVARVGQVAGSKTKEK 250
Score = 78 bits (190), Expect = 9e-015
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +2
Query: 86 RSVKVSNLSSGATEHGIKEFFSFSGEVESIDIQ---GNEYSAYVTFKDPQGAETAVLLSG 256
RSV+V+N+S ATE I EFFSFSG++E I+IQ G A+VTF DP+ E A+LLSG
Sbjct: 5 RSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSG 64
Query: 257 ASIADQSVIIEMAPNY 304
A+I DQ V I A NY
Sbjct: 65 ATIVDQIVTITRAENY 80
>TAIR9_protein||AT3G01210.1 | Symbols: | nucleic acid binding / oxidoreductase
| chr3:72182-73159 FORWARD
Length = 250
Score = 132 bits (332), Expect = 3e-031
Identities = 89/239 (37%), Positives = 127/239 (53%), Gaps = 27/239 (11%)
Frame = +2
Query: 95 KVSNLSSGATEHGIKEFFSFSGEVESIDI---QGNEYSAYVTFKDPQGAETAVLLSGASI 265
+V+NLS ATE + FFS G VE ++I QG+ +AYVTF+D + AVLLSGA+I
Sbjct: 9 QVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMAVLLSGATI 68
Query: 266 ADQSVIIEMAPNYTPPTAPHTETQSGGGGVAESDA---------QKAEDVVSSMLAKGFI 418
DQ+V I + Y + + + V SDA A+ VV +MLAKG++
Sbjct: 69 VDQTVWISVYGVYLHESNNLRQEEDYSVTVTRSDAFASSPGEAITVAQQVVQTMLAKGYV 128
Query: 419 LGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVT 598
L KDA+GKAKA DE F+S +A I +GLTQ I + LV + D+ + +
Sbjct: 129 LSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELV----RSADEKYHFS 184
Query: 599 ERTKSAF------ATAEQTV-----SSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEV 742
+ TKSA A A T+ ++A T+V+ +R+ G W + A R AKAA +
Sbjct: 185 DFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHI 243
>TAIR9_protein||AT1G14340.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:4897709-4898776 FORWARD
Length = 245
Score = 104 bits (257), Expect = 2e-022
Identities = 53/126 (42%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = +2
Query: 374 KAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSL 553
KA++VV MLA GF+LGKDA+ KAKAFDE G ++ A A V+ ++Q+IGLT KI G
Sbjct: 119 KAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTG--- 175
Query: 554 VTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAA 733
E ++ DQ + V++ KSA +T ++A T+V+ + + +G W +GA R AKAA
Sbjct: 176 -LEAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAA 234
Query: 734 GEVSQK 751
++ +
Sbjct: 235 SDLGTR 240
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,607,844,451
Number of Sequences: 33410
Number of Extensions: 11607844451
Number of Successful Extensions: 375721606
Number of sequences better than 0.0: 0
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