BLASTX 7.6.2
Query= UN22370 /QuerySize=926
(925 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S... 413 1e-115
TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S... 243 1e-064
>TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S8 (RPS8A) |
chr5:6851695-6853012 REVERSE
Length = 223
Score = 413 bits (1059), Expect = 1e-115
Identities = 208/226 (92%), Positives = 215/226 (95%), Gaps = 3/226 (1%)
Frame = -1
Query: 889 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 710
MGISRDSIHKRRATGGKQK WRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 709 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLQHYGV 530
LDTGNYSWGSEA TRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 529 EVGRKKKSAPAAAKKEGEDGEDAAPAAAAPEEVKKSNHVLRKIESRQEGRSLDSHIEDQF 350
E+GRKKKSA ++ KK+GE+GE+A A AAPEEVKKSNH+LRKI SRQEGRSLDSHIEDQF
Sbjct: 121 ELGRKKKSA-SSTKKDGEEGEEA--AVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQF 177
Query: 349 ASGRLLACISSRPGQCGRADGYILEGKELEFYQKKIQKKKGKGAA* 212
ASGRLLACISSRPGQCGRADGYILEGKELEFY KKIQKKKGKGAA*
Sbjct: 178 ASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 223
>TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S8 (RPS8B) |
chr5:23902626-23903670 REVERSE
Length = 211
Score = 243 bits (620), Expect = 1e-064
Identities = 118/127 (92%), Positives = 124/127 (97%)
Frame = -1
Query: 889 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 710
MGISRDSIHKRRATGGKQK WRKKRKYE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 709 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLQHYGV 530
LDTGN+SWGSEAVTRKTR+LDV YNASNNELVRT+TLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 529 EVGRKKK 509
++GRKKK
Sbjct: 121 DIGRKKK 127
Score = 136 bits (342), Expect = 2e-032
Identities = 64/78 (82%), Positives = 71/78 (91%)
Frame = -1
Query: 451 AAAPEEVKKSNHVLRKIESRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEG 272
A EEVKKSNHV RK+E RQEGR+LDSH+E+QF+SGRLLACI+SRPGQCGRADGYILEG
Sbjct: 130 AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEG 189
Query: 271 KELEFYQKKIQKKKGKGA 218
KELEFY KK+QKKKGK A
Sbjct: 190 KELEFYMKKLQKKKGKNA 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,607,844,451
Number of Sequences: 33410
Number of Extensions: 11607844451
Number of Successful Extensions: 375721606
Number of sequences better than 0.0: 0
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