BLASTX 7.6.2
Query= UN22432 /QuerySize=1811
(1810 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast... 345 6e-095
TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast... 229 7e-060
TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein | chr1:... 149 5e-036
TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:... 102 1e-021
TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein | chr1:... 86 5e-017
>TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species:
Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr5:12077014-12078396 FORWARD
Length = 265
Score = 345 bits (884), Expect = 6e-095
Identities = 199/276 (72%), Positives = 216/276 (78%), Gaps = 20/276 (7%)
Frame = -1
Query: 958 MSAIVCGSKRSLFEDLSAASPSSSSSPPVSKKLRCFSSSSPPRFPPPPPSSSSLLLNHLA 779
MSAIVCG KRSLFEDL+AA SPPVSKKLRCFSSSS RF PP P SSSLLL+HLA
Sbjct: 1 MSAIVCG-KRSLFEDLAAA------SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLA 53
Query: 778 AIFPDMDHQILERAIEECGDDIDSAIRCLNQLRLESTNKNSESS------IQEEAKVEAP 617
AIFPDMD QILERAIEECGDD+DSAIRCLNQLRLES NKNS+S+ + +E VE P
Sbjct: 54 AIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVE-P 112
Query: 616 QAQQQGKEE--VLNMDGAEWVDLFVREMMSASDMKDAKDRAARALEALEKSIKHVLVVPT 443
Q Q KEE VLN+DG EWV+LFVREMM+ASDMKDAK RAARALEALEKSI T
Sbjct: 113 QQQGSAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSIN--ARTGT 170
Query: 442 RRRAAVSSRDSMLSSS*K-LSSRRQLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQE 266
+ + ML + + LLKRAVVTQQKRQRESEDQSQELQHLRQ+VTQYQE
Sbjct: 171 DAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQE 230
Query: 265 QLRTLEVNNYALTLHLKQAQQNNGSIPGRFHPDVF* 158
QLRTLEVNNYALTLHLKQAQQN+ SIPGR+HPDVF*
Sbjct: 231 QLRTLEVNNYALTLHLKQAQQNS-SIPGRYHPDVF* 265
>TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:12077014-12078091 FORWARD
Length = 188
Score = 229 bits (582), Expect = 7e-060
Identities = 130/172 (75%), Positives = 140/172 (81%), Gaps = 16/172 (9%)
Frame = -1
Query: 958 MSAIVCGSKRSLFEDLSAASPSSSSSPPVSKKLRCFSSSSPPRFPPPPPSSSSLLLNHLA 779
MSAIVCG KRSLFEDL+AA SPPVSKKLRCFSSSS RF PP P SSSLLL+HLA
Sbjct: 1 MSAIVCG-KRSLFEDLAAA------SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLA 53
Query: 778 AIFPDMDHQILERAIEECGDDIDSAIRCLNQLRLESTNKNSESS------IQEEAKVEAP 617
AIFPDMD QILERAIEECGDD+DSAIRCLNQLRLES NKNS+S+ + +E VE P
Sbjct: 54 AIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVE-P 112
Query: 616 QAQQQGKEE--VLNMDGAEWVDLFVREMMSASDMKDAKDRAARALEALEKSI 467
Q Q KEE VLN+DG EWV+LFVREMM+ASDMKDAK RAARALEALEKSI
Sbjct: 113 QQQGSAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSI 164
>TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein |
chr1:30109447-30111051 REVERSE
Length = 249
Score = 149 bits (376), Expect = 5e-036
Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 16/246 (6%)
Frame = -1
Query: 889 SSSPPVSKKLRCFSSSSPPRFPPPPPSSSSLLLNHLAAIFPDMDHQILERAIEECGDDID 710
+SSPP SK+ RCFS S+ P + PP SS L+ L + FP ++ +L +A+E+ G D +
Sbjct: 16 NSSPPSSKRFRCFSPSNSPIWSSPPSSS----LDQLHSAFPHIELTVLVKALEDNGSDFN 71
Query: 709 SAIRCLNQLRLESTNKNSESSIQEEAKVEAPQAQQQGKEEVLNMDGAEWVDLFVREMMSA 530
+A++ L S K +E A + A G G +WV+L VRE++ +
Sbjct: 72 AAMKSLYSF-ASSEEKKAEELAAGGAATQETDAVCGGNPPT---SGDDWVELLVREVLQS 127
Query: 529 SDMKDAKDRAARALEALEKSIKHVLVVPTRRRAAVSSRDSMLSSS*K---LSSRRQLLKR 359
S DAK RAAR LEALEK +L R A ++ ++ + L +LKR
Sbjct: 128 SGTDDAKVRAARVLEALEK----MLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKR 183
Query: 358 AVVTQQKRQRESEDQSQELQHLRQMVTQYQEQLRTLEVNNYALTLHLKQAQQNNGSIPGR 179
AV Q +RQ+ ED + +L L+Q+V QYQE+LR LEVNNYAL + L+Q + N S+P R
Sbjct: 184 AVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGN-SMPAR 242
Query: 178 FHPDVF 161
F+PDVF
Sbjct: 243 FNPDVF 248
>TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:560135-560860
FORWARD
Length = 180
Score = 102 bits (252), Expect = 1e-021
Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Frame = -1
Query: 580 MDGAEWVDLFVREMMSASDMKDAKDRAARALEALEKSIKHVLVVPTRRRAAVSSRDSMLS 401
+DGA+WVD V EM A ++ D + R A LEALE IK + A SM
Sbjct: 45 IDGAKWVDRLVSEMTKAINIDDMRRRVAVILEALESIIKKNTNASKKLEYA-----SMKE 99
Query: 400 SS*KLSSRRQLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQEQLRTLEVNNYALTLH 221
S L + Q+LKR + Q +R E+E++++++ HLR +V QYQEQ+ LE++NYA+ LH
Sbjct: 100 SLQSLINDNQILKRVIANQHQRSSENEEKAKQVLHLRGVVGQYQEQVHKLELSNYAMKLH 159
Query: 220 LKQAQQNNGSIPGRFHPDVF* 158
L+++QQ S G PD++*
Sbjct: 160 LQRSQQQQTSFSGNLPPDIY* 180
>TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein |
chr1:30110059-30111051 REVERSE
Length = 181
Score = 86 bits (212), Expect = 5e-017
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Frame = -1
Query: 889 SSSPPVSKKLRCFSSSSPPRFPPPPPSSSSLLLNHLAAIFPDMDHQILERAIEECGDDID 710
+SSPP SK+ RCFS S+ P + PP SS L+ L + FP ++ +L +A+E+ G D +
Sbjct: 16 NSSPPSSKRFRCFSPSNSPIWSSPPSSS----LDQLHSAFPHIELTVLVKALEDNGSDFN 71
Query: 709 SAIRCLNQLRLESTNKNSESSIQEEAKVEAPQAQQQGKEEVLNMDGAEWVDLFVREMMSA 530
+A++ L S K +E A + A G G +WV+L VRE++ +
Sbjct: 72 AAMKSLYSF-ASSEEKKAEELAAGGAATQETDAVCGGNPPT---SGDDWVELLVREVLQS 127
Query: 529 SDMKDAKDRAARALEALEKSI 467
S DAK RAAR LEALEK +
Sbjct: 128 SGTDDAKVRAARVLEALEKML 148
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,607,844,451
Number of Sequences: 33410
Number of Extensions: 11607844451
Number of Successful Extensions: 375721606
Number of sequences better than 0.0: 0
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