BLASTX 7.6.2
Query= UN22457 /QuerySize=1038
(1037 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53870.1 | Symbols: | 40S ribosomal protein S... 458 3e-129
TAIR9_protein||AT2G31610.1 | Symbols: | 40S ribosomal protein S... 449 2e-126
TAIR9_protein||AT5G35530.1 | Symbols: | 40S ribosomal protein S... 449 2e-126
>TAIR9_protein||AT3G53870.1 | Symbols: | 40S ribosomal protein S3 (RPS3B) |
chr3:19951547-19952782 FORWARD
Length = 250
Score = 458 bits (1178), Expect = 3e-129
Identities = 234/250 (93%), Positives = 240/250 (96%)
Frame = +2
Query: 50 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 229
M TQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 230 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 409
EKGRRIRELTSLVQKRF+FP DSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 410 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 589
GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 590 VLGIKVKVMLDWDPKGVLGPKTPLPDVVIIHSPKEDDVSSAPAQVAAPAALLPEAPLTAV 769
VLGIKVKVMLDWDPKG+ GPKTPLPDVVIIHSPKE++ APAQVAAPAAL+ +APLTAV
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240
Query: 770 DYPEMIPVA* 799
DYP MIPVA*
Sbjct: 241 DYPAMIPVA* 250
>TAIR9_protein||AT2G31610.1 | Symbols: | 40S ribosomal protein S3 (RPS3A) |
chr2:13450384-13451669 FORWARD
Length = 251
Score = 449 bits (1154), Expect = 2e-126
Identities = 229/247 (92%), Positives = 235/247 (95%)
Frame = +2
Query: 50 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 229
MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 230 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 409
EKGRRIRELTSLVQKRF+FP DSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 410 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 589
GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 590 VLGIKVKVMLDWDPKGVLGPKTPLPDVVIIHSPKEDDVSSAPAQVAAPAALLPEAPLTAV 769
VLGIKVK+MLDWDP G GPKTPLPDVVIIH+PK+D V SAPAQ AAP L+ EAPLT V
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQEAPLTTV 240
Query: 770 DYPEMIP 790
DYPEMIP
Sbjct: 241 DYPEMIP 247
>TAIR9_protein||AT5G35530.1 | Symbols: | 40S ribosomal protein S3 (RPS3C) |
chr5:13710355-13712192 REVERSE
Length = 249
Score = 449 bits (1153), Expect = 2e-126
Identities = 230/249 (92%), Positives = 236/249 (94%), Gaps = 1/249 (0%)
Frame = +2
Query: 50 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 229
MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 230 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 409
EKGRRIRELTSLVQKRF+FPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 410 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 589
GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 590 VLGIKVKVMLDWDPKGVLGPKTPLPDVVIIHSPKEDDVSSAPAQVAAPAALLPEAPLTAV 769
VLG+KVK+MLDWDPKG GP TPLPDVVIIH+PKEDDV APAQV AA +PEAPLT
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVPEAPLTTT 240
Query: 770 DYPEMIPVA 796
DYP M PVA
Sbjct: 241 DYPAM-PVA 248
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,650,243,680
Number of Sequences: 33410
Number of Extensions: 11650243680
Number of Successful Extensions: 375726486
Number of sequences better than 0.0: 0
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