BLASTX 7.6.2
Query= UN22465 /QuerySize=1021
(1020 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G16840.3 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 429 2e-120
TAIR9_protein||AT5G16840.1 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 426 2e-119
TAIR9_protein||AT5G16840.2 | Symbols: BPA1 | BPA1 (BINDINGPARTNE... 421 4e-118
TAIR9_protein||AT4G17720.1 | Symbols: | RNA recognition motif (... 268 4e-072
TAIR9_protein||AT1G67950.1 | Symbols: | RNA recognition motif (... 200 2e-051
TAIR9_protein||AT1G67950.2 | Symbols: | RNA recognition motif (... 200 2e-051
TAIR9_protein||AT1G67950.3 | Symbols: | RNA recognition motif (... 197 1e-050
TAIR9_protein||AT5G46870.1 | Symbols: | RNA recognition motif (... 184 9e-047
TAIR9_protein||AT1G67950.4 | Symbols: | RNA recognition motif (... 169 2e-042
TAIR9_protein||AT5G32450.1 | Symbols: | RNA recognition motif (... 136 4e-032
TAIR9_protein||AT3G01210.1 | Symbols: | nucleic acid binding / ... 127 1e-029
TAIR9_protein||AT1G14340.1 | Symbols: | RNA recognition motif (... 106 4e-023
>TAIR9_protein||AT5G16840.3 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 258
Score = 429 bits (1102), Expect = 2e-120
Identities = 223/256 (87%), Positives = 239/256 (93%), Gaps = 3/256 (1%)
Frame = +1
Query: 76 MAIRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHSAYVTFKDPQGAETAVLLSG 255
MA+RSVKV NLSSGATEH IKEFFSFSG+VESIDIQSNEHSAYVTFK+ QGAETAVLLSG
Sbjct: 1 MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLLSG 60
Query: 256 ASIADQSVIIEMAPNYTPPTAPHAETQSGGGGVAESVVQKAEDVVSSMLAKGFILGKDAV 435
ASIADQSVIIE+APNY+PP APHAETQS G AESVVQKAEDVVSSMLAKGFILGKDAV
Sbjct: 61 ASIADQSVIIELAPNYSPPAAPHAETQSSG---AESVVQKAEDVVSSMLAKGFILGKDAV 117
Query: 436 GKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSA 615
GKAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS
Sbjct: 118 GKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSV 177
Query: 616 FATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQ 795
+A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q
Sbjct: 178 YAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQ 237
Query: 796 TEHQPPEGYSPIHSSE 843
++ Q PEGYSPIHSSE
Sbjct: 238 SQQQLPEGYSPIHSSE 253
>TAIR9_protein||AT5G16840.1 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 260
Score = 426 bits (1093), Expect = 2e-119
Identities = 221/254 (87%), Positives = 237/254 (93%), Gaps = 3/254 (1%)
Frame = +1
Query: 82 IRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHSAYVTFKDPQGAETAVLLSGAS 261
+RSVKV NLSSGATEH IKEFFSFSG+VESIDIQSNEHSAYVTFK+ QGAETAVLLSGAS
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLLSGAS 64
Query: 262 IADQSVIIEMAPNYTPPTAPHAETQSGGGGVAESVVQKAEDVVSSMLAKGFILGKDAVGK 441
IADQSVIIE+APNY+PP APHAETQS G AESVVQKAEDVVSSMLAKGFILGKDAVGK
Sbjct: 65 IADQSVIIELAPNYSPPAAPHAETQSSG---AESVVQKAEDVVSSMLAKGFILGKDAVGK 121
Query: 442 AKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAFA 621
AKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS +A
Sbjct: 122 AKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYA 181
Query: 622 TAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQTE 801
AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q++
Sbjct: 182 AAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQSQ 241
Query: 802 HQPPEGYSPIHSSE 843
Q PEGYSPIHSSE
Sbjct: 242 QQLPEGYSPIHSSE 255
>TAIR9_protein||AT5G16840.2 | Symbols: BPA1 | BPA1 (BINDINGPARTNEROFACD11 1);
nucleic acid binding / nucleotide binding / oxidoreductase |
chr5:5536042-5538026 FORWARD
Length = 261
Score = 421 bits (1081), Expect = 4e-118
Identities = 221/255 (86%), Positives = 237/255 (92%), Gaps = 4/255 (1%)
Frame = +1
Query: 82 IRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQ-SNEHSAYVTFKDPQGAETAVLLSGA 258
+RSVKV NLSSGATEH IKEFFSFSG+VESIDIQ SNEHSAYVTFK+ QGAETAVLLSGA
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHSAYVTFKETQGAETAVLLSGA 64
Query: 259 SIADQSVIIEMAPNYTPPTAPHAETQSGGGGVAESVVQKAEDVVSSMLAKGFILGKDAVG 438
SIADQSVIIE+APNY+PP APHAETQS G AESVVQKAEDVVSSMLAKGFILGKDAVG
Sbjct: 65 SIADQSVIIELAPNYSPPAAPHAETQSSG---AESVVQKAEDVVSSMLAKGFILGKDAVG 121
Query: 439 KAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAF 618
KAKAFDEK GFTSTATAGVAS+DQKIGL+QK+TAGTSLV EKIK VDQ+FQVTERTKS +
Sbjct: 122 KAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVY 181
Query: 619 ATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAEQPPQPSQT 798
A AEQTVSSAG+AVMKNR+VLTGVSWAAGAFNRVA+AAGEV QKTKEKVEAEQP QP+Q+
Sbjct: 182 AAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAEQPSQPAQS 241
Query: 799 EHQPPEGYSPIHSSE 843
+ Q PEGYSPIHSSE
Sbjct: 242 QQQLPEGYSPIHSSE 256
>TAIR9_protein||AT4G17720.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:9862660-9864498 REVERSE
Length = 314
Score = 268 bits (685), Expect = 4e-072
Identities = 149/264 (56%), Positives = 189/264 (71%), Gaps = 11/264 (4%)
Frame = +1
Query: 76 MAIRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHS---AYVTFKDPQGAETAVL 246
M + +VKVSN+S GAT+ +KEFFSFSGD+ ++ QS AYVTFKD QGAETAVL
Sbjct: 1 MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60
Query: 247 LSGASIADQSVIIEMAPNY--TPPTAPHAETQSGGGG--VAESVVQKAEDVVSSMLAKGF 414
LSGA+I D SVI+ MAP+Y +P E + +SV++KAEDVVSSMLAKGF
Sbjct: 61 LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120
Query: 415 ILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQV 594
ILGKDA+ KAK+ DEK TSTA+A VAS D+KIG T KI GT +V EK++ VDQ +QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180
Query: 595 TERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVEAE 774
+E+TKSA A AEQTVS+AG+A+MKNR+VLTG +W GAFN+VAKAA EV QK KEKV
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240
Query: 775 QPPQPSQTEHQPPEGYSPIHSSES 846
+ + + + + ++ +H SES
Sbjct: 241 E----EEDKRKVVDEFARVHLSES 260
>TAIR9_protein||AT1G67950.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480420 REVERSE
Length = 279
Score = 200 bits (506), Expect = 2e-051
Identities = 112/239 (46%), Positives = 161/239 (67%), Gaps = 14/239 (5%)
Frame = +1
Query: 64 RSISMAIRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHS---AYVTFKDPQGAE 234
+S +++VK+SN+S ++ +KEFFSFSGD++ ++++S AYVTFKD QGAE
Sbjct: 22 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 81
Query: 235 TAVLLSGASIADQSVIIEMAPNY-TPPTAPHAETQSGGGGVAESVVQKAEDVVSSMLAKG 411
TA+LL+GA IAD V I A NY PP A +++ G + V+KAEDVV+ M+ +G
Sbjct: 82 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS---VKKAEDVVNIMVGRG 138
Query: 412 FILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQ 591
+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+ +Q
Sbjct: 139 YALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQ 198
Query: 592 VTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVE 768
V E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKVE
Sbjct: 199 VREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKVE 250
>TAIR9_protein||AT1G67950.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480072 REVERSE
Length = 280
Score = 200 bits (506), Expect = 2e-051
Identities = 112/239 (46%), Positives = 161/239 (67%), Gaps = 14/239 (5%)
Frame = +1
Query: 64 RSISMAIRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHS---AYVTFKDPQGAE 234
+S +++VK+SN+S ++ +KEFFSFSGD++ ++++S AYVTFKD QGAE
Sbjct: 23 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 82
Query: 235 TAVLLSGASIADQSVIIEMAPNY-TPPTAPHAETQSGGGGVAESVVQKAEDVVSSMLAKG 411
TA+LL+GA IAD V I A NY PP A +++ G + V+KAEDVV+ M+ +G
Sbjct: 83 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS---VKKAEDVVNIMVGRG 139
Query: 412 FILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQ 591
+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+ +Q
Sbjct: 140 YALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQ 199
Query: 592 VTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVE 768
V E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKVE
Sbjct: 200 VREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKVE 251
>TAIR9_protein||AT1G67950.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25480420 REVERSE
Length = 280
Score = 197 bits (499), Expect = 1e-050
Identities = 113/240 (47%), Positives = 161/240 (67%), Gaps = 15/240 (6%)
Frame = +1
Query: 64 RSISMAIRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHS---AYVTFKDPQGAE 234
+S +++VK+SN+S ++ +KEFFSFSGD++ ++++S AYVTFKD QGAE
Sbjct: 22 QSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAE 81
Query: 235 TAVLLSGASIADQSVIIEMAPNY-TPPTAPHAETQSGG-GGVAESVVQKAEDVVSSMLAK 408
TA+LL+GA IAD V I A NY PP A ++Q G + V+KAEDVV+ M+ +
Sbjct: 82 TAMLLTGAVIADLRVSITPAVNYQLPPEALALDSQEHSFNGFS---VKKAEDVVNIMVGR 138
Query: 409 GFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSF 588
G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V EK++ +D+ +
Sbjct: 139 GYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERY 198
Query: 589 QVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEVSQKTKEKVE 768
QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA KEKVE
Sbjct: 199 QVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-------VKEKVE 251
>TAIR9_protein||AT5G46870.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:19015486-19016990 FORWARD
Length = 296
Score = 184 bits (466), Expect = 9e-047
Identities = 91/135 (67%), Positives = 112/135 (82%)
Frame = +1
Query: 361 SVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITA 540
SV +KAEDVVS M++KGF+LGKDA+ KAK+ DEK TSTA+A V S D++IG T+KI
Sbjct: 107 SVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINT 166
Query: 541 GTSLVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRV 720
GT++V+EK+K VDQ FQVTE+TKSA A AEQTVS+AG+A+MKNR+VLTG +W GAFNRV
Sbjct: 167 GTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRV 226
Query: 721 AKAAGEVSQKTKEKV 765
+KAA EV QK KEKV
Sbjct: 227 SKAAEEVGQKAKEKV 241
Score = 89 bits (218), Expect = 5e-018
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Frame = +1
Query: 76 MAIRSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQSNEHS---AYVTFKDPQGAETAVL 246
M++ +VKVSN+S ATE +KEFFSFSGD+ ++ QS AYVTFKD QGAETAVL
Sbjct: 1 MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60
Query: 247 LSGASIADQSVIIEMAPNYTPPTAPHAETQS 339
L+G++I D SV + M+P+Y P A +S
Sbjct: 61 LTGSTIVDSSVTVTMSPDYQLPPDALASIES 91
>TAIR9_protein||AT1G67950.4 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:25478884-25479778 REVERSE
Length = 220
Score = 169 bits (428), Expect = 2e-042
Identities = 96/191 (50%), Positives = 130/191 (68%), Gaps = 11/191 (5%)
Frame = +1
Query: 199 AYVTFKDPQGAETAVLLSGASIADQSVIIEMAPNY-TPPTAPHAETQSGGGGVAESVVQK 375
AYVTFKD QGAETA+LL+GA IAD V I A NY PP A +++ G + V+K
Sbjct: 11 AYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALDSEHSFNGFS---VKK 67
Query: 376 AEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLV 555
AEDVV+ M+ +G+ LGKDA+ KAKAFD++ S A+A +AS+D K+GL++K++ GT++V
Sbjct: 68 AEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVV 127
Query: 556 TEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAG 735
EK++ +D+ +QV E TKSA A AE+T SA TA+M N +V +G SW + AF V KA
Sbjct: 128 NEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKA-- 185
Query: 736 EVSQKTKEKVE 768
KEKVE
Sbjct: 186 -----VKEKVE 191
>TAIR9_protein||AT5G32450.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:12079707-12081317 FORWARD
Length = 268
Score = 136 bits (340), Expect = 4e-032
Identities = 66/145 (45%), Positives = 101/145 (69%)
Frame = +1
Query: 328 ETQSGGGGVAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASID 507
+T++ G + + V KA+DVV+++LAKG LG+DAV KAKAFDEK + A+A V+S D
Sbjct: 106 QTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFD 165
Query: 508 QKIGLTQKITAGTSLVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTG 687
+++GLT+K++ G S V EK+K VDQ QV+++T +A AE+ ++ G+AV +R+V G
Sbjct: 166 KRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAG 225
Query: 688 VSWAAGAFNRVAKAAGEVSQKTKEK 762
+W +GAF++VA+ KTKEK
Sbjct: 226 AAWFSGAFSKVARVGQVAGSKTKEK 250
Score = 78 bits (190), Expect = 9e-015
Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Frame = +1
Query: 85 RSVKVSNLSSGATEHGIKEFFSFSGDVESIDIQ---SNEHSAYVTFKDPQGAETAVLLSG 255
RSV+V+N+S ATE I EFFSFSGD+E I+IQ A+VTF DP+ E A+LLSG
Sbjct: 5 RSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSG 64
Query: 256 ASIADQSVIIEMAPNY 303
A+I DQ V I A NY
Sbjct: 65 ATIVDQIVTITRAENY 80
>TAIR9_protein||AT3G01210.1 | Symbols: | nucleic acid binding / oxidoreductase
| chr3:72182-73159 FORWARD
Length = 250
Score = 127 bits (318), Expect = 1e-029
Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 27/239 (11%)
Frame = +1
Query: 94 KVSNLSSGATEHGIKEFFSFSGDVESIDI---QSNEHSAYVTFKDPQGAETAVLLSGASI 264
+V+NLS ATE + FFS G VE ++I Q + +AYVTF+D + AVLLSGA+I
Sbjct: 9 QVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMAVLLSGATI 68
Query: 265 ADQSVIIEM------APNYTPPTAPHAETQSGGGGVAES---VVQKAEDVVSSMLAKGFI 417
DQ+V I + N ++ T + A S + A+ VV +MLAKG++
Sbjct: 69 VDQTVWISVYGVYLHESNNLRQEEDYSVTVTRSDAFASSPGEAITVAQQVVQTMLAKGYV 128
Query: 418 LGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKITAGTSLVTEKIKGVDQSFQVT 597
L KDA+GKAKA DE F+S +A I +GLTQ I + LV + D+ + +
Sbjct: 129 LSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELV----RSADEKYHFS 184
Query: 598 ERTKSAF------ATAEQTV-----SSAGTAVMKNRFVLTGVSWAAGAFNRVAKAAGEV 741
+ TKSA A A T+ ++A T+V+ +R+ G W + A R AKAA +
Sbjct: 185 DFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHI 243
>TAIR9_protein||AT1G14340.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:4897709-4898776 FORWARD
Length = 245
Score = 106 bits (262), Expect = 4e-023
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
Frame = +1
Query: 355 AESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKLGFTSTATAGVASIDQKIGLTQKI 534
A V KA++VV MLA GF+LGKDA+ KAKAFDE G ++ A A V+ ++Q+IGLT KI
Sbjct: 113 AGEAVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKI 172
Query: 535 TAGTSLVTEKIKGVDQSFQVTERTKSAFATAEQTVSSAGTAVMKNRFVLTGVSWAAGAFN 714
G E ++ DQ + V++ KSA +T ++A T+V+ + + +G W +GA
Sbjct: 173 FTG----LEAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALE 228
Query: 715 RVAKAAGEVSQK 750
R AKAA ++ +
Sbjct: 229 RAAKAASDLGTR 240
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,650,243,680
Number of Sequences: 33410
Number of Extensions: 11650243680
Number of Successful Extensions: 375726486
Number of sequences better than 0.0: 0
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