BLASTX 7.6.2
Query= UN22478 /QuerySize=921
(920 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 274 6e-074
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 274 bits (700), Expect = 6e-074
Identities = 154/203 (75%), Positives = 164/203 (80%), Gaps = 22/203 (10%)
Frame = +2
Query: 71 MAVSSVTSFSLSSLANP------TRQKVSLLSLFPSSSTHVSSTGFGSSVLNKPSSLFTT 232
MAVS+V+SF L S P TR KVSLL PSSSTH G S VL KP S+ T
Sbjct: 1 MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLL---PSSSTH---GGLSSCVLTKP-SVSLT 53
Query: 233 KIFAAPETL-----TIDQPSSEEFSEVPSSSSINVDADKMAPKQKIRIKLRSYWVPIIED 397
K+FA P+TL +D+P+ SEVPSSSSI+VDADKMAPKQKIRIKLRSYWVP+IED
Sbjct: 54 KVFAVPDTLDPTPEILDEPA----SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIED 109
Query: 398 SCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAMFHFEIRTHQRMIDILYPT 577
SCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDA FHFEIRTHQRMIDILYPT
Sbjct: 110 SCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPT 169
Query: 578 AQTIDSLMQLDLPAGVDVEVKL* 646
AQTIDSLMQLDLPAGVDVEVKL*
Sbjct: 170 AQTIDSLMQLDLPAGVDVEVKL* 192
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (118), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 350 KIRIKLRSYWVPIIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDAMF 526
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 527 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 643
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 50 bits (118), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 350 KIRIKLRSYWVPIIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDAMF 526
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 527 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 643
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (118), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 350 KIRIKLRSYWVPIIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDAMF 526
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 527 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 643
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (118), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 350 KIRIKLRSYWVPIIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDAMF 526
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 527 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 643
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (118), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 350 KIRIKLRSYWVPIIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDAMF 526
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 527 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 643
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (118), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 350 KIRIKLRSYWVPIIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDAMF 526
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 527 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 643
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,650,243,680
Number of Sequences: 33410
Number of Extensions: 11650243680
Number of Successful Extensions: 375726486
Number of sequences better than 0.0: 0
|
