BLASTX 7.6.2
Query= UN22517 /QuerySize=1535
(1534 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens... 78 1e-013
sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus... 78 1e-013
sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens... 76 5e-013
sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus... 76 5e-013
sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus G... 76 7e-013
sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens... 76 7e-013
sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus... 76 7e-013
sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus ... 76 7e-013
sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Ra... 72 7e-012
sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=... 71 2e-011
sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=... 71 2e-011
sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens... 63 5e-009
sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fasci... 57 2e-007
sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rat... 57 3e-007
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=1
SV=2
Length = 371
Score = 78 bits (191), Expect = 1e-013
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGL-L 1208
++VGSIIG+KG+ +KK+ EE+ ARI I +G ER V ++G P ++ + +
Sbjct: 55 KEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKAFAMIAY 109
Query: 1207 RVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLG 1028
+ I++ + + + PP V+ RL+VPASQ GSLIGK G+ +K I+E+ G V+V G
Sbjct: 110 KFEEDIINSMSNSPATSKPP--VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG 167
Query: 1027 SEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
+ +R V + G P ++ + ++ I
Sbjct: 168 D----MLPNSTERAVTISGTPDAIIQCVKQI 194
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2
SV=3
Length = 371
Score = 78 bits (191), Expect = 1e-013
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGL-L 1208
++VGSIIG+KG+ +KK+ EE+ ARI I +G ER V ++G P ++ + +
Sbjct: 55 KEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKAFAMIAY 109
Query: 1207 RVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLG 1028
+ I++ + + + PP V+ RL+VPASQ GSLIGK G+ +K I+E+ G V+V G
Sbjct: 110 KFEEDIINSMSNSPATSKPP--VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG 167
Query: 1027 SEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
+ +R V + G P ++ + ++ I
Sbjct: 168 D----MLPNSTERAVTISGTPDAIIQCVKQI 194
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1
SV=1
Length = 365
Score = 76 bits (186), Expect = 5e-013
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLL- 1208
++VGSIIG+KG+ +KK+ EE+ ARI I +G ER + ++G P +++ + ++
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTNAIFKAFAMIID 77
Query: 1207 RVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLG 1028
++ I + + + PP V+ RL+VPASQ GSLIGK G +K I+E+ G V+V G
Sbjct: 78 KLEEDISSSMTNSTAASRPP--VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG 135
Query: 1027 SEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
+ +R + + G P S+ + ++ I
Sbjct: 136 D----MLPNSTERAITIAGIPQSIIECVKQI 162
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1
SV=1
Length = 362
Score = 76 bits (186), Expect = 5e-013
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLL- 1208
++VGSIIG+KG+ +KK+ EE+ ARI I +G ER + ++G P +++ + ++
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTNAIFKAFAMIID 77
Query: 1207 RVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLG 1028
++ I + + + PP V+ RL+VPASQ GSLIGK G +K I+E+ G V+V G
Sbjct: 78 KLEEDISSSMTNSTAASRPP--VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG 135
Query: 1027 SEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
+ +R + + G P S+ + ++ I
Sbjct: 136 D----MLPNSTERAITIAGIPQSIIECVKQI 162
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 76 bits (185), Expect = 7e-013
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 28/159 (17%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR 1205
++VGSIIG+KG+ +K+I EE+ ARI I +G ER + ++G + + +
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------PTNAIFK 70
Query: 1204 VHMRIVDGLDGE---------ASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAA 1052
I+D L+ + A+ PP V+ RL+VPA+Q GSLIGK G +K I+E+
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPP---VTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 1051 GCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
G V+V G + +R + + G P SV + ++ I
Sbjct: 128 GAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQI 162
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1
SV=2
Length = 356
Score = 76 bits (185), Expect = 7e-013
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 28/159 (17%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR 1205
++VGSIIG+KG+ +K+I EE+ ARI I +G ER + ++G + + +
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------PTNAIFK 70
Query: 1204 VHMRIVDGLDGE---------ASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAA 1052
I+D L+ + A+ PP V+ RL+VPA+Q GSLIGK G +K I+E+
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPP---VTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 1051 GCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
G V+V G + +R + + G P SV + ++ I
Sbjct: 128 GAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQI 162
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1
SV=1
Length = 356
Score = 76 bits (185), Expect = 7e-013
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 28/159 (17%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR 1205
++VGSIIG+KG+ +K+I EE+ ARI I +G ER + ++G + + +
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------PTNAIFK 70
Query: 1204 VHMRIVDGLDGE---------ASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAA 1052
I+D L+ + A+ PP V+ RL+VPA+Q GSLIGK G +K I+E+
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPP---VTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 1051 GCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
G V+V G + +R + + G P SV + ++ I
Sbjct: 128 GAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQI 162
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus
GN=PCBP1 PE=2 SV=1
Length = 356
Score = 76 bits (185), Expect = 7e-013
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 28/159 (17%)
Frame = -1
Query: 1384 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR 1205
++VGSIIG+KG+ +K+I EE+ ARI I +G ER + ++G + + +
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------PTNAIFK 70
Query: 1204 VHMRIVDGLDGE---------ASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKAIQEAA 1052
I+D L+ + A+ PP V+ RL+VPA+Q GSLIGK G +K I+E+
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPP---VTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 1051 GCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELI 935
G V+V G + +R + + G P SV + ++ I
Sbjct: 128 GAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQI 162
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 72 bits (176), Expect = 7e-012
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Frame = -1
Query: 1426 QQNFVANNGDEVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEE 1247
QQ V +VP VG IIGR G+ I +I +E+ +I+I G ER+ M++G E
Sbjct: 91 QQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPE 150
Query: 1246 PESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATVKA 1067
S +D ++ G+ P +++PAS+AG +IGK G T+K
Sbjct: 151 SVQSAKRLLDQIVEKGRPAPGFHHGDG-----PGNAVQEIMIPASKAGLVIGKGGETIKQ 205
Query: 1066 IQEAAGCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELIASHLR 920
+QE AG V+++ +D P D+ + + G+P V ++ E++ +R
Sbjct: 206 LQERAG--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 251
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens
GN=FUBP1 PE=1 SV=3
Length = 644
Score = 71 bits (173), Expect = 2e-011
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Frame = -1
Query: 1432 EDQQNFVANNGDEVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGK 1253
+ Q V +VP VG IIGR G+ I +I +E+ +I+I G ER+ M++G
Sbjct: 94 QQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT 153
Query: 1252 EEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATV 1073
E S +D ++ G+ P +++PAS+AG +IGK G T+
Sbjct: 154 PESVQSAKRLLDQIVEKGRPAPGFHHGDG-----PGNAVQEIMIPASKAGLVIGKGGETI 208
Query: 1072 KAIQEAAGCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELIASHLR 920
K +QE AG V+++ +D P D+ + + G+P V ++ E++ +R
Sbjct: 209 KQLQERAG--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 256
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus
GN=Fubp1 PE=1 SV=1
Length = 651
Score = 71 bits (173), Expect = 2e-011
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Frame = -1
Query: 1432 EDQQNFVANNGDEVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGK 1253
+ Q V +VP VG IIGR G+ I +I +E+ +I+I G ER+ M++G
Sbjct: 90 QQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT 149
Query: 1252 EEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPTKVSTRLLVPASQAGSLIGKQGATV 1073
E S +D ++ G+ P +++PAS+AG +IGK G T+
Sbjct: 150 PESVQSAKRLLDQIVEKGRPAPGFHHGDG-----PGNAVQEIMIPASKAGLVIGKGGETI 204
Query: 1072 KAIQEAAGCIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKSLELIASHLR 920
K +QE AG V+++ +D P D+ + + G+P V ++ E++ +R
Sbjct: 205 KQLQERAG--VKMVMIQDGPQ-NTGADKPLRITGDPYKVQQAKEMVLELIR 252
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1
SV=1
Length = 492
Score = 63 bits (152), Expect = 5e-009
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Frame = -1
Query: 1309 KILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR------VHMRIVDGLDGEASQAPPP 1148
K D PGTTER +V G E +++ + +R +V+ L + + P
Sbjct: 70 KSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDR 129
Query: 1147 TKVSTRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLGSEDLPVFALQDDRVVEVVGE 968
K +L+VP S AG +IGK GATVKA+ E +G V++ P +RVV V GE
Sbjct: 130 AK-QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGE 185
Query: 967 PTSVHKSLELIASHLRK 917
P VHK++ I +++
Sbjct: 186 PEQVHKAVSAIVQKVQE 202
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis
GN=NOVA1 PE=2 SV=1
Length = 483
Score = 57 bits (137), Expect = 2e-007
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Frame = -1
Query: 1309 KILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPTKVS-- 1136
K D PGTTER ++ G E +++ + +R + V + S P T V+
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTE-PVSILQPQTTVNPD 145
Query: 1135 ----TRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLGSEDLPVFALQDDRVVEVVGE 968
+++VP S AG +IGK GATVKAI E +G V++ S+ LQ +RVV V GE
Sbjct: 146 RIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQ-ERVVTVSGE 202
Query: 967 PTSVHKSLELIASHLRK 917
P K++ELI +++
Sbjct: 203 PEQNRKAVELIIQKIQE 219
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus
GN=Nova1 PE=2 SV=1
Length = 474
Score = 57 bits (136), Expect = 3e-007
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Frame = -1
Query: 1309 KILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPTKVS-- 1136
K D PGTTER ++ G E +++ + +R + V + S P T V+
Sbjct: 86 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTE-PVSILQPQTTVNPD 144
Query: 1135 ----TRLLVPASQAGSLIGKQGATVKAIQEAAGCIVRVLGSEDLPVFALQDDRVVEVVGE 968
+++VP S AG +IGK GATVKAI E +G V++ S+ LQ +RVV V GE
Sbjct: 145 RIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQ-ERVVTVSGE 201
Query: 967 PTSVHKSLELIASHLRK 917
P K++ELI +++
Sbjct: 202 PEQNRKAVELIIQKIQE 218
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,892,683,958
Number of Sequences: 518415
Number of Extensions: 92892683958
Number of Successful Extensions: 611291351
Number of sequences better than 0.0: 0
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