BLASTX 7.6.2
Query= UN22519 /QuerySize=906
(905 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic OS... 330 7e-090
sp|B7JWV1|RS20_CYAP8 30S ribosomal protein S20 OS=Cyanothece sp.... 80 2e-014
sp|B1WZT9|RS20_CYAA5 30S ribosomal protein S20 OS=Cyanothece sp.... 75 4e-013
sp|B7KG02|RS20_CYAP7 30S ribosomal protein S20 OS=Cyanothece sp.... 74 1e-012
sp|Q8YWL3|RS20_ANASP 30S ribosomal protein S20 OS=Anabaena sp. (... 72 5e-012
sp|Q3M5D2|RS20_ANAVT 30S ribosomal protein S20 OS=Anabaena varia... 72 5e-012
sp|Q8DJN4|RS20_THEEB 30S ribosomal protein S20 OS=Thermosynechoc... 72 5e-012
sp|P73336|RS20_SYNY3 30S ribosomal protein S20 OS=Synechocystis ... 71 8e-012
sp|Q318Q5|RS20_PROM9 30S ribosomal protein S20 OS=Prochlorococcu... 71 1e-011
sp|A8G6Y8|RS20_PROM2 30S ribosomal protein S20 OS=Prochlorococcu... 70 2e-011
sp|B0JGK4|RS20_MICAN 30S ribosomal protein S20 OS=Microcystis ae... 69 3e-011
sp|B0C2C8|RS20_ACAM1 30S ribosomal protein S20 OS=Acaryochloris ... 69 4e-011
sp|Q2JVV4|RS20_SYNJA 30S ribosomal protein S20 OS=Synechococcus ... 68 7e-011
sp|Q2JI48|RS20_SYNJB 30S ribosomal protein S20 OS=Synechococcus ... 67 2e-010
sp|Q3AZA6|RS20_SYNS9 30S ribosomal protein S20 OS=Synechococcus ... 66 3e-010
sp|A2C4N4|RS20_PROM1 30S ribosomal protein S20 OS=Prochlorococcu... 65 4e-010
sp|Q31N19|RS20_SYNE7 30S ribosomal protein S20 OS=Synechococcus ... 64 1e-009
sp|Q5MZ25|RS20_SYNP6 30S ribosomal protein S20 OS=Synechococcus ... 64 1e-009
sp|Q1XDN4|RR20_PORYE 30S ribosomal protein S20, chloroplastic OS... 64 2e-009
sp|P51253|RR20_PORPU 30S ribosomal protein S20, chloroplastic OS... 60 2e-008
>sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic OS=Arabidopsis
thaliana GN=RPS20 PE=1 SV=1
Length = 202
Score = 330 bits (846), Expect = 7e-090
Identities = 181/207 (87%), Positives = 187/207 (90%), Gaps = 6/207 (2%)
Frame = +2
Query: 62 MATIVQCLSSCATLNSKFKVLSLKGASSSSSSSPTSSSLSTRRGASATVCSSLGFSQSVS 241
MATIVQCLSSCATL S+FKVLSLKG S SS SSS S RRGASAT+ SSL FSQSVS
Sbjct: 1 MATIVQCLSSCATLESQFKVLSLKGISCSS----PSSSFSNRRGASATLSSSLSFSQSVS 56
Query: 242 QCVAFSSGNLWVQKNPARQLIVCE-AAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRM 418
QCVAFS+GNLWVQK P RQLIVCE AAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRM
Sbjct: 57 QCVAFSTGNLWVQK-PMRQLIVCEAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRM 115
Query: 419 KKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYSAIDKAVKVRALHKNTGARRKSRLARRK 598
KKVLEAL+GLKKK DAQ DEIVTVEKLIGEAYSAIDKAVKV+ALHKNTGARRKSRLARRK
Sbjct: 116 KKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRK 175
Query: 599 KAVEIHHGWYVPDTAAAAATEAVTMAA 679
KAVEIHHGWYVPD AAAA +EAV MAA
Sbjct: 176 KAVEIHHGWYVPDAAAAAPSEAVPMAA 202
>sp|B7JWV1|RS20_CYAP8 30S ribosomal protein S20 OS=Cyanothece sp. (strain PCC
8801) GN=rpsT PE=3 SV=1
Length = 97
Score = 80 bits (196), Expect = 2e-014
Identities = 44/90 (48%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR AE+ R++NK+ KS RT MKK EA+ P PD + VE+ + AYS
Sbjct: 6 SALKRIAVAERNRLHNKAYKSAVRTLMKKYFEAVQAYGNNP--TPDNLSVVEQCMSAAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKAV 607
IDKAVK LH+N GAR+K+RLA+ K V
Sbjct: 64 KIDKAVKRHVLHRNNGARKKARLAKALKQV 93
>sp|B1WZT9|RS20_CYAA5 30S ribosomal protein S20 OS=Cyanothece sp. (strain ATCC
51142) GN=rpsT PE=3 SV=1
Length = 97
Score = 75 bits (184), Expect = 4e-013
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR R +E+ R+ NKS KS RT MKK L+A++ P P+ V++ + AYS
Sbjct: 6 SALKRIRTSERNRLRNKSYKSAVRTLMKKYLQAVEEYAASP--TPENKAVVDQRMSAAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKAV 607
IDKAVK LH+N GAR+K+RLA+ + V
Sbjct: 64 KIDKAVKRSVLHRNNGARKKARLAKALQQV 93
>sp|B7KG02|RS20_CYAP7 30S ribosomal protein S20 OS=Cyanothece sp. (strain PCC
7424) GN=rpsT PE=3 SV=1
Length = 97
Score = 74 bits (181), Expect = 1e-012
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NKS KS +T MKK A++ K P + + V++ + AYS
Sbjct: 6 SAIKRIQIAERNRLRNKSYKSAVKTLMKKYYAAVEDYKANPSEEAKK--AVDQAMSAAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKAV 607
IDKAVK R LH+N GAR+KS+LA K V
Sbjct: 64 KIDKAVKCRILHRNNGARKKSQLANALKQV 93
>sp|Q8YWL3|RS20_ANASP 30S ribosomal protein S20 OS=Anabaena sp. (strain PCC
7120) GN=rpsT PE=3 SV=1
Length = 97
Score = 72 bits (175), Expect = 5e-012
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KRA+ AE+ RV NK+ KS +T MK L A+ P P+ + + AYS
Sbjct: 6 SALKRAQIAERNRVRNKTYKSSVKTLMKNYLSAVQAYAANP--TPESKQEAQTRLAAAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKAVE 610
IDKAVK LH N GAR+KSRLA + K +E
Sbjct: 64 RIDKAVKRGILHPNNGARKKSRLASKLKPIE 94
>sp|Q3M5D2|RS20_ANAVT 30S ribosomal protein S20 OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=rpsT PE=3 SV=2
Length = 98
Score = 72 bits (175), Expect = 5e-012
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KRA+ AE+ RV NK+ KS +T MK L A+ P P+ + + AYS
Sbjct: 7 SALKRAQIAERNRVRNKTYKSSVKTLMKNYLSAVQAYAANP--TPESKQEAQTRLAAAYS 64
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKAVE 610
IDKAVK LH N GAR+KSRLA + K +E
Sbjct: 65 RIDKAVKRGILHPNNGARKKSRLASKLKPIE 95
>sp|Q8DJN4|RS20_THEEB 30S ribosomal protein S20 OS=Thermosynechococcus elongatus
(strain BP-1) GN=rpsT PE=3 SV=1
Length = 98
Score = 72 bits (175), Expect = 5e-012
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SAAKRA+ AE+ R+ NK+ +S RT +K L A+ + D P+++ V + A+S
Sbjct: 6 SAAKRAQIAERNRLRNKAYRSAVRTLIKNYLNAIS--QYSTDPTPEKLAEVHHRLNLAFS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLAR 592
IDKAVK LH+NTGARRK+RL R
Sbjct: 64 KIDKAVKRGVLHRNTGARRKARLTR 88
>sp|P73336|RS20_SYNY3 30S ribosomal protein S20 OS=Synechocystis sp. (strain PCC
6803) GN=rpsT PE=3 SV=1
Length = 97
Score = 71 bits (173), Expect = 8e-012
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR AE+ R+ NKS KS +T MKK ++++ P+ P+++ T+ + A+S
Sbjct: 6 SALKRIEIAERNRLQNKSYKSAIKTLMKKTFQSVEAYASDPN--PEKLDTINTSMAAAFS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLAR 592
IDKAVK + +HKN AR+K+RLA+
Sbjct: 64 KIDKAVKCKVIHKNNAARKKARLAK 88
>sp|Q318Q5|RS20_PROM9 30S ribosomal protein S20 OS=Prochlorococcus marinus
(strain MIT 9312) GN=rpsT PE=3 SV=1
Length = 97
Score = 71 bits (172), Expect = 1e-011
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NKS KS RT KK LE + KK P+ + ++V + +A+S
Sbjct: 6 SAKKRIKIAERNRLINKSYKSTVRTLTKKTLENCEKYKKDPNDENKDLVKTS--LNKAFS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRL 586
IDKAVK LHKN GA RKS++
Sbjct: 64 LIDKAVKKNVLHKNNGANRKSKI 86
>sp|A8G6Y8|RS20_PROM2 30S ribosomal protein S20 OS=Prochlorococcus marinus
(strain MIT 9215) GN=rpsT PE=3 SV=1
Length = 97
Score = 70 bits (169), Expect = 2e-011
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NKS KS RT KK LE + KK+P+ D + V+ + +A+S
Sbjct: 6 SAKKRIQIAERNRLNNKSYKSTVRTLTKKTLENCEKYKKEPN--EDNMNLVKTSLNKAFS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRL 586
IDKAVK LHKN GA +KS++
Sbjct: 64 LIDKAVKKNVLHKNNGANKKSKI 86
>sp|B0JGK4|RS20_MICAN 30S ribosomal protein S20 OS=Microcystis aeruginosa
(strain NIES-843) GN=rpsT PE=3 SV=1
Length = 97
Score = 69 bits (168), Expect = 3e-011
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + +E+ R+ NK+ KS RT +KK L A+ P P+ + + ++ + EAYS
Sbjct: 6 SALKRVQISERNRLRNKAYKSAVRTLIKKCLVAVSAYGANP--SPEGLESAQQALSEAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKAV 607
IDKAVK LH+N GAR+K+ LA+ + V
Sbjct: 64 KIDKAVKRNVLHRNNGARKKAGLAKALQKV 93
>sp|B0C2C8|RS20_ACAM1 30S ribosomal protein S20 OS=Acaryochloris marina (strain
MBIC 11017) GN=rpsT PE=3 SV=1
Length = 94
Score = 69 bits (167), Expect = 4e-011
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR AE+ R+ NK+ KS +T K+ A+D K P D++ ++ + YS
Sbjct: 6 SAKKRILIAERNRLQNKAYKSAIKTFTKRFQAAVDDYKSNP--SDDQLAAIQNEMSVTYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLARRKKA 604
IDKAVKV H+NTGAR+K+ LAR KA
Sbjct: 64 KIDKAVKVGVFHRNTGARKKAGLARILKA 92
>sp|Q2JVV4|RS20_SYNJA 30S ribosomal protein S20 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=rpsT PE=3 SV=1
Length = 100
Score = 68 bits (165), Expect = 7e-011
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NK+ K+ R MKKV P QP+ + ++ + A+S
Sbjct: 6 SAIKRVKIAERNRLRNKATKAMVRALMKKVTSLSSAYAANP--QPETLQEIQAAMSAAFS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLAR 592
IDKA K LHKNT ARRK+RL+R
Sbjct: 64 RIDKAAKTGVLHKNTAARRKARLSR 88
>sp|Q2JI48|RS20_SYNJB 30S ribosomal protein S20 OS=Synechococcus sp. GN=rpsT
PE=3 SV=1
Length = 109
Score = 67 bits (161), Expect = 2e-010
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NK+ K+ R MKKV+ P Q + + ++ + A+S
Sbjct: 6 SAIKRVQIAERNRLRNKATKAMVRALMKKVISLSTAYAANP--QQETLQEIQAAMSAAFS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLAR 592
IDKA K LHKNT ARRK+RLAR
Sbjct: 64 RIDKAAKTGVLHKNTAARRKARLAR 88
>sp|Q3AZA6|RS20_SYNS9 30S ribosomal protein S20 OS=Synechococcus sp. (strain
CC9902) GN=rpsT PE=3 SV=1
Length = 98
Score = 66 bits (160), Expect = 3e-010
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 335 DSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAY 514
+SA KR AE+ R+ N++ KS RT MK+ A D P + +V+ + EA+
Sbjct: 5 NSAKKRIEIAERNRLRNRTYKSSMRTLMKRCFSACDAYGSAPGEEAK--ASVQASLREAF 62
Query: 515 SAIDKAVKVRALHKNTGARRKSRLARRKKAV 607
S IDKAVKV LH+N GA +KSRL+ + V
Sbjct: 63 SKIDKAVKVGVLHRNNGANQKSRLSSAVRKV 93
>sp|A2C4N4|RS20_PROM1 30S ribosomal protein S20 OS=Prochlorococcus marinus
(strain NATL1A) GN=rpsT PE=3 SV=1
Length = 98
Score = 65 bits (158), Expect = 4e-010
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +2
Query: 335 DSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAY 514
+SA KR + AE+ R+ NK+ KS RT MK+ A +K+P + ++K A+
Sbjct: 5 NSAKKRIQIAERNRLENKNYKSTVRTLMKRCFVACGIFEKEPG--DESKADLQKTFNLAF 62
Query: 515 SAIDKAVKVRALHKNTGARRKSRLARRKKAV 607
S IDKAVK LHKNTGA +KSRL+ K V
Sbjct: 63 SKIDKAVKKGVLHKNTGANQKSRLSVALKKV 93
>sp|Q31N19|RS20_SYNE7 30S ribosomal protein S20 OS=Synechococcus elongatus
(strain PCC 7942) GN=rpsT PE=3 SV=1
Length = 98
Score = 64 bits (155), Expect = 1e-009
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NK+ KS +T +K A D P+ + V + + AYS
Sbjct: 6 SAIKRVQIAERNRLRNKAYKSAVKTLVKHCFTAFDAYAADPNETARQ--AVNERLSAAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLAR 592
IDKAVK LH NTGAR+K+RLA+
Sbjct: 64 KIDKAVKRGVLHANTGARKKARLAK 88
>sp|Q5MZ25|RS20_SYNP6 30S ribosomal protein S20 OS=Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsT PE=3 SV=1
Length = 98
Score = 64 bits (155), Expect = 1e-009
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 338 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYS 517
SA KR + AE+ R+ NK+ KS +T +K A D P+ + V + + AYS
Sbjct: 6 SAIKRVQIAERNRLRNKAYKSAVKTLVKHCFTAFDAYAADPNETARQ--AVNERLSAAYS 63
Query: 518 AIDKAVKVRALHKNTGARRKSRLAR 592
IDKAVK LH NTGAR+K+RLA+
Sbjct: 64 KIDKAVKRGVLHANTGARKKARLAK 88
>sp|Q1XDN4|RR20_PORYE 30S ribosomal protein S20, chloroplastic OS=Porphyra
yezoensis GN=rps20 PE=3 SV=1
Length = 95
Score = 64 bits (153), Expect = 2e-009
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +2
Query: 341 AAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYSA 520
A KR + +E+ R+ N+ KS +T K+ L +D L + D V+ I + YS
Sbjct: 7 AIKRIKTSERNRLINRKYKSVVKTLTKRCLLNIDNL------ESDNFNDVQSSISQVYSK 60
Query: 521 IDKAVKVRALHKNTGARRKSRLAR 592
IDKAVK A H NTGAR+K+RLAR
Sbjct: 61 IDKAVKKGAFHPNTGARKKARLAR 84
>sp|P51253|RR20_PORPU 30S ribosomal protein S20, chloroplastic OS=Porphyra
purpurea GN=rps20 PE=3 SV=1
Length = 94
Score = 60 bits (143), Expect = 2e-008
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +2
Query: 341 AAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKPDAQPDEIVTVEKLIGEAYSA 520
A KR + +E+ R+ N+ KS +T K+ L ++ L+ + V+ I + YS
Sbjct: 7 AIKRIKTSERNRLINRKYKSVVKTLTKRCLMNIENLEN------SNLNDVQLSISQVYSK 60
Query: 521 IDKAVKVRALHKNTGARRKSRLAR 592
IDKA+K A H NTGAR+K+RLAR
Sbjct: 61 IDKAIKKGAFHPNTGARKKARLAR 84
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,892,683,958
Number of Sequences: 518415
Number of Extensions: 92892683958
Number of Successful Extensions: 611291351
Number of sequences better than 0.0: 0
|
