BLASTX 7.6.2
Query= UN22521 /QuerySize=625
(624 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G16740.1 | Symbols: | ribosomal protein L20 f... 250 8e-067
TAIR9_protein||ATCG00660.1 | Symbols: RPL20 | encodes a chloropl... 66 1e-011
>TAIR9_protein||AT1G16740.1 | Symbols: | ribosomal protein L20 family protein |
chr1:5727773-5728950 FORWARD
Length = 127
Score = 250 bits (636), Expect = 8e-067
Identities = 124/127 (97%)
Frame = +3
Query: 75 MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQ 254
MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQ
Sbjct: 1 MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQ 60
Query: 255 HGVNYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRNSFPGNKNVVQAPRKVD 434
HGVNYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSR SFPGNKNVVQA RKVD
Sbjct: 61 HGVNYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRKSFPGNKNVVQASRKVD 120
Query: 435 ISSINA* 455
ISSINA*
Sbjct: 121 ISSINA* 127
>TAIR9_protein||ATCG00660.1 | Symbols: RPL20 | encodes a chloroplast ribosomal
protein L20, a constituent of the large subunit of the ribosomal
complex | chrC:68512-68865 REVERSE
Length = 118
Score = 66 bits (160), Expect = 1e-011
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Frame = +3
Query: 51 RGRGRGRKMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIE 230
RG R+ K +F A FRG R ++ +AL ++RDR +KR+ R LWI
Sbjct: 6 RGYIARRRRTKLRLF--ASSFRGAHSRLTRTMTQQRIRALVSAHRDRGKRKRDFRRLWIT 63
Query: 231 RINAGSRQHGV--NYGNFIHGLMKENIQLNRKVLSELSM 341
RINA + GV +Y FIH L K+ + LNRK+L+++++
Sbjct: 64 RINAVIHEMGVFYSYNEFIHNLYKKQLLLNRKILAQIAL 102
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,650,243,680
Number of Sequences: 33410
Number of Extensions: 11650243680
Number of Successful Extensions: 375726486
Number of sequences better than 0.0: 0
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