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SwissProt blast output of UN22568


BLASTX 7.6.2

Query= UN22568 /QuerySize=1200
        (1199 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q29RH4|THOC3_BOVIN THO complex subunit 3 OS=Bos taurus GN=THO...    320   2e-086
sp|Q8VE80|THOC3_MOUSE THO complex subunit 3 OS=Mus musculus GN=T...    320   2e-086
sp|Q96J01|THOC3_HUMAN THO complex subunit 3 OS=Homo sapiens GN=T...    319   3e-086
sp|Q9USL1|YJKA_SCHPO Uncharacterized WD repeat-containing protei...    229   5e-059
sp|P14197|AAC3_DICDI WD repeat-containing protein AAC3 OS=Dictyo...    206   3e-052
sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing prote...    107   3e-022
sp|Q8YV57|Y2124_ANASP Uncharacterized WD repeat-containing prote...     74   1e-012
sp|O61585|KTNB1_STRPU Katanin p80 WD40-containing subunit B1 OS=...     74   2e-012
sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subun...     60   3e-008
sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subun...     60   4e-008
sp|Q90ZL4|LIS1B_XENLA Lissencephaly-1 homolog B OS=Xenopus laevi...     58   1e-007
sp|Q6DE72|LIS1A_XENLA Lissencephaly-1 homolog A OS=Xenopus laevi...     57   2e-007
sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase ...     57   2e-007
sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase ...     57   2e-007
sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase ...     57   2e-007
sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB...     57   2e-007
sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropical...     57   2e-007
sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase ...     57   2e-007
sp|Q9PTR5|LIS1_CHICK Platelet-activating factor acetylhydrolase ...     57   2e-007

>sp|Q29RH4|THOC3_BOVIN THO complex subunit 3 OS=Bos taurus GN=THOC3 PE=2 SV=1

          Length = 351

 Score =  320 bits (818), Expect = 2e-086
 Identities = 155/308 (50%), Positives = 212/308 (68%), Gaps = 11/308 (3%)
 Frame = -3

Query: 1107 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARVWTIEPHGHSKVKDLELKGHTDSVDQL 928
            +RE+  H  KVHSVAW+ +G +LASGS D+TA V+ +E      VK+   +GH DSVDQL
Sbjct:   48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEK--DRLVKENNYRGHGDSVDQL 105

Query:  927 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYRPDGTHIAVGNRDDEL 748
            CW P + DL  TASGDK++R+WD R+ KC       GENINI + PDG  IAVGN+DD +
Sbjct:  106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165

Query:  747 TILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSYPLEKMQNDLKPVD 568
            T +D  K ++S  + +F +EVNEI+WN   ++FFLT G G + +LSYP      +LKPV 
Sbjct:  166 TFIDA-KTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYP------ELKPVQ 218

Query:  567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
            ++ AH + C CI  DP G+YFA GSAD+LVSLWD+ +++C+R F++LD PVRT+SF+H G
Sbjct:  219 SINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDG 278

Query:  387 EYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKSAKYYG--D 214
            + +ASASED FIDIA V+TG  + ++ C +   +V W+PK  LLA+A DDK  KY    +
Sbjct:  279 KMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSRE 338

Query:  213 EGVFRIFG 190
             G  ++FG
Sbjct:  339 AGTVKLFG 346

>sp|Q8VE80|THOC3_MOUSE THO complex subunit 3 OS=Mus musculus GN=Thoc3 PE=2 SV=1

          Length = 351

 Score =  320 bits (818), Expect = 2e-086
 Identities = 155/308 (50%), Positives = 212/308 (68%), Gaps = 11/308 (3%)
 Frame = -3

Query: 1107 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARVWTIEPHGHSKVKDLELKGHTDSVDQL 928
            +RE+  H  KVHSVAW+ +G +LASGS D+TA V+ +E      VK+   +GH DSVDQL
Sbjct:   48 TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEK--DRLVKENNYRGHGDSVDQL 105

Query:  927 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYRPDGTHIAVGNRDDEL 748
            CW P + DL  TASGDK++R+WD R+ KC       GENINI + PDG  IAVGN+DD +
Sbjct:  106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165

Query:  747 TILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSYPLEKMQNDLKPVD 568
            T +D  K ++S  + +F +EVNEI+WN   ++FFLT G G + +LSYP      +LKPV 
Sbjct:  166 TFIDA-KTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYP------ELKPVQ 218

Query:  567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
            ++ AH + C CI  DP G+YFA GSAD+LVSLWD+ +++C+R F++LD PVRT+SF+H G
Sbjct:  219 SINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDG 278

Query:  387 EYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKSAKYYG--D 214
            + +ASASED FIDIA V+TG  + ++ C +   +V W+PK  LLA+A DDK  KY    +
Sbjct:  279 KMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSRE 338

Query:  213 EGVFRIFG 190
             G  ++FG
Sbjct:  339 AGTVKLFG 346

>sp|Q96J01|THOC3_HUMAN THO complex subunit 3 OS=Homo sapiens GN=THOC3 PE=1 SV=1

          Length = 351

 Score =  319 bits (817), Expect = 3e-086
 Identities = 155/308 (50%), Positives = 212/308 (68%), Gaps = 11/308 (3%)
 Frame = -3

Query: 1107 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARVWTIEPHGHSKVKDLELKGHTDSVDQL 928
            +RE+  H  KVHSVAW+ +G +LASGS D+TA V+ +E      VK+   +GH DSVDQL
Sbjct:   48 TREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEK--DRLVKENNYRGHGDSVDQL 105

Query:  927 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYRPDGTHIAVGNRDDEL 748
            CW P + DL  TASGDK++R+WD R+ KC       GENINI + PDG  IAVGN+DD +
Sbjct:  106 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 165

Query:  747 TILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSYPLEKMQNDLKPVD 568
            T +D  K ++S  + +F +EVNEI+WN   ++FFLT G G + +LSYP      +LKPV 
Sbjct:  166 TFIDA-KTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYP------ELKPVQ 218

Query:  567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
            ++ AH + C CI  DP G+YFA GSAD+LVSLWD+ +++C+R F++LD PVRT+SF+H G
Sbjct:  219 SINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDG 278

Query:  387 EYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKSAKYYG--D 214
            + +ASASED FIDIA V+TG  + ++ C +   +V W+PK  LLA+A DDK  KY    +
Sbjct:  279 KMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSRE 338

Query:  213 EGVFRIFG 190
             G  ++FG
Sbjct:  339 AGTVKLFG 346

>sp|Q9USL1|YJKA_SCHPO Uncharacterized WD repeat-containing protein C18B5.10c
        OS=Schizosaccharomyces pombe GN=SPCC18B5.10c PE=2 SV=1

          Length = 309

 Score =  229 bits (582), Expect = 5e-059
 Identities = 111/292 (38%), Positives = 172/292 (58%), Gaps = 8/292 (2%)
 Frame = -3

Query: 1122 FKNLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARVWTIEPHGHSKVKDLELKGHTD 943
            F  L +R+ QG +  + S+ WN +G++LAS S   +  VW  +        +L  +G+  
Sbjct:   12 FPELKTRDLQGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNSDRLDFKFTTELGNRGY-G 70

Query:  942 SVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYRPDGTHIAVGN 763
             V+QL WDP HSD +      K +R WD RS K   + E + ENI  T+ P G +    +
Sbjct:   71 LVEQLVWDPTHSDRLMAVYAGKMIRFWDFRSAKPIAEIESNYENIYATWSPSGNYCCASS 130

Query:  762 RDDELTILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSYPLEKMQND 583
            RDD L+ +D R+  + +   +   E NE  W+ S DLFF+TTGLGTV+++ +P       
Sbjct:  131 RDDMLSFIDARE-RRIMETFQQPCETNECCWSFSEDLFFMTTGLGTVQIMEWP------S 183

Query:  582 LKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTIS 403
            LK V  + AH + C+CI   P  R+ A+G AD++ SLWD  +++C R+ T++D P+RT+S
Sbjct:  184 LKRVYDIKAHNSNCFCIEFSPDNRHLAIGGADAITSLWDPQELICERSITRMDYPIRTLS 243

Query:  402 FNHSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYA 247
            F++   Y+AS SED ++DIA+ +TG  + +IP    +N V W+P  ++LAYA
Sbjct:  244 FSYDSRYLASGSEDRYVDIADTKTGDQIWKIPTNGPLNKVAWHPTKHILAYA 295

>sp|P14197|AAC3_DICDI WD repeat-containing protein AAC3 OS=Dictyostelium
        discoideum GN=AAC3 PE=2 SV=2

          Length = 478

 Score =  206 bits (523), Expect = 3e-052
 Identities = 99/257 (38%), Positives = 162/257 (63%), Gaps = 10/257 (3%)
 Frame = -3

Query: 966 LELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYRPD 787
           +ELKGH  S++++ W PK++DL+A+A  DK +++WD + GKC      + ENI++ + PD
Sbjct: 222 IELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVSTNSENIDVRWSPD 281

Query: 786 GTHIAVGNRDDELTILDVRKFNKSLYKRKFS-YEVNEIAWNMSGDLFFLTTGLGTVEVLS 610
           G  I    RDD L ++D+    K+L   KF+  E+N++ W+ +GDL  +   +G +E   
Sbjct: 282 GQFIVACTRDDHLALIDLPTI-KTLKIYKFNGEELNQVGWDNNGDLILMANSMGNIEAYK 340

Query: 609 YPLEKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTK 430
           + L K    +K + TL  HTA  YC+  DP G+Y A GSADS+VSLWD+ DM+C++TF K
Sbjct: 341 F-LPKSTTHVKHLKTLYGHTASIYCMEFDPTGKYLAAGSADSIVSLWDIEDMMCVKTFIK 399

Query: 429 LDSPVRTISFNHSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAY 250
              P R++SF+  G++IA++S +  I+I ++++ + +H I C + ++S+ W+P   LLAY
Sbjct: 400 STFPCRSVSFSFDGQFIAASSFESTIEIFHIESSQPIHTIEC-SGVSSLMWHPTLPLLAY 458

Query: 249 AGD------DKSAKYYG 217
           A +      D S + +G
Sbjct: 459 APEINENNKDPSIRVFG 475

>sp|Q8YTC2|Y2800_ANASP Uncharacterized WD repeat-containing protein alr2800
        OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1

          Length = 1258

 Score =  107 bits (265), Expect = 3e-022
 Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 35/321 (10%)
 Frame = -3

Query: 1137 EETIPFKNLHSRE----YQGHKKKVHSVAWNSNGTKLASGSVDQTARVWTIEPHGHSKVK 970
            + TI   N H+ E    Y GH   V+S+A++ +   L SGS D+T ++W  + H   K  
Sbjct:  831 DRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKT- 889

Query:  969 DLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGE-NINITYR 793
               L GHT+ V  + + P    L A  S D+SVRLW+ R+G+C +    + +  + + + 
Sbjct:  890 ---LHGHTNEVCSVAFSPDGQTL-ACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFS 945

Query:  792 PDGTHIAVGNRDDELTILD--VRKFNKSL-------YKRKFSYEVNEIAWNMSGDLFFLT 640
            PD   +A G+ D  + + D    K+  SL       Y   FS +   +A + S D     
Sbjct:  946 PDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLA-SASTDSSVRL 1004

Query:  639 TGLGTVEVLSYPLEKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMS 460
              + T +     LE              HT   Y +   P+G+  A GSAD  V LW++S
Sbjct: 1005 WNISTGQCFQILLE--------------HTDWVYAVVFHPQGKIIATGSADCTVKLWNIS 1050

Query:  459 DMLCLRTFTKLDSPVRTISFNHSGEYIASASEDLFIDIANVQTGRTVHQIPCRA-AMNSV 283
               CL+T ++    +  ++++  G+ +ASAS D  + + +  TGR V  +   +  + S 
Sbjct: 1051 TGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSA 1110

Query:  282 EWNPKYNLLAYAGDDKSAKYY 220
             ++P   ++A    D++ K +
Sbjct: 1111 IFSPNGEIIATCSTDQTVKIW 1131


 Score =  89 bits (218), Expect = 7e-017
 Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
 Frame = -3

Query: 903 LVATASGDKSVRLWDARSGKCTQQAELSGENIN-ITYRPDGTHIAVGNRDDELTILDVRK 727
           L+AT   D  VR+W+ +SGK           +  + + PDG  +A    D+ + +  VR 
Sbjct: 656 LLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRD 715

Query: 726 FNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSYPLEKMQNDLKPVDTLTAHTA 547
                      +EV  +A++  G+     +G  T+++          D   + TLT HT 
Sbjct: 716 GVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDI------QDGTCLQTLTGHTD 769

Query: 546 GCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSGEYIASAS 367
              C+A  P G   A  +AD  + LWD+S   CLRT       VR+++F+  G+ +AS S
Sbjct: 770 WVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGS 829

Query: 366 EDLFIDIANVQTGRTVH-QIPCRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
            D  I I N  TG  +   I    ++ S+ ++P   +L     D++ K +
Sbjct: 830 GDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLW 879

>sp|Q8YV57|Y2124_ANASP Uncharacterized WD repeat-containing protein all2124
        OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1

          Length = 1683

 Score =  74 bits (181), Expect = 1e-012
 Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
 Frame = -3

Query:  960 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGEN---INITYRP 790
            L+GH D V  +    +    +A+ S DK+++LW +R G+  +   L+G      ++++ P
Sbjct: 1068 LEGHKDGVISISIS-RDGQTIASGSLDKTIKLW-SRDGRLFR--TLNGHEDAVYSVSFSP 1123

Query:  789 DGTHIAVGNRDDELTILDVRKFNKSLYKRKFSYE--VNEIAWNMSGDLFFLTTGLGTVEV 616
            DG  IA G  D  + +      + +L K    +E  VN + ++  G      +   ++++
Sbjct: 1124 DGQTIASGGSDKTIKLWQTS--DGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKL 1181

Query:  615 LSYPLEKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTF 436
                  ++      + TLT H+AG   +   P G+  A GS D  V LW   D   L+T 
Sbjct: 1182 WDTTSGQL------LMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTL 1235

Query:  435 TKLDSPVRTISFNHSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYN-- 262
                  V ++SF+  G+ +ASAS D  I +  +  G+ V  +      N   W+  ++  
Sbjct: 1236 NGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTL---KGHNDSVWDVNFSSD 1292

Query:  261 --LLAYAGDDKSAKYYGDEGV 205
               +A A  D + K +   G+
Sbjct: 1293 GKAIASASRDNTIKLWNRHGI 1313

>sp|O61585|KTNB1_STRPU Katanin p80 WD40-containing subunit B1
        OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1

          Length = 690

 Score =  74 bits (180), Expect = 2e-012
 Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 7/190 (3%)
 Frame = -3

Query: 786 GTHIAVGNRDDELTILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVLSY 607
           G  +  G  D ++ +  V K N  +     +  V+ + +N S +L    +  GT+++  Y
Sbjct:  29 GRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKI--Y 86

Query: 606 PLEKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKL 427
            LE      K V TLT H     C+   P G + A GS D+ V LWD+    C+ T+   
Sbjct:  87 DLE----PAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGH 142

Query: 426 DSPVRTISFNHSGEYIASASEDLFIDIANVQTGRTVHQIPCR-AAMNSVEWNPKYNLLAY 250
              V  I F+  G+++ +ASED  I + ++  G+   +       +  +E++P   LLA 
Sbjct: 143 SDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLAS 202

Query: 249 AGDDKSAKYY 220
              D++ +++
Sbjct: 203 GSSDRTVQFW 212

>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo
        sapiens GN=TAF5 PE=1 SV=3

          Length = 800

 Score =  60 bits (144), Expect = 3e-008
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
 Frame = -3

Query: 822 SGENINITYRPDGTHIAVGNRDDELTILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFL 643
           SG     ++ PD  ++   + D  + +  ++ F   +  +  +Y V +  ++  G  +F+
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG-YYFV 601

Query: 642 TTGLGTVEVLSYPLEKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDM 463
           + G   V  L        +  +P+     H A   C    P   Y A GSAD  V LWD+
Sbjct: 602 SGGHDRVARL-----WATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656

Query: 462 SDMLCLRTFTKLDSPVRTISFNHSGEYIASASED 361
            +  C+R FT    P+ +++F+ +G ++A+ + D
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 690

>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus
        musculus GN=Taf5 PE=2 SV=1

          Length = 801

 Score =  60 bits (143), Expect = 4e-008
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
 Frame = -3

Query: 822 SGENINITYRPDGTHIAVGNRDDELTILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFL 643
           SG     ++ PD  ++   + D  + +  ++ F   +  +  +Y V +  ++  G  +F+
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG-YYFV 602

Query: 642 TTGLGTVEVLSYPLEKMQNDLKPVDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDM 463
           + G   V  L        +  +P+     H A   C    P   Y A GSAD  V LWD+
Sbjct: 603 SGGHDRVARL-----WATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657

Query: 462 SDMLCLRTFTKLDSPVRTISFNHSGEYIASASED 361
            +  C+R FT    P+ +++F+ +G ++A+ + D
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 691

>sp|Q90ZL4|LIS1B_XENLA Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-b
        PE=2 SV=3

          Length = 410

 Score =  58 bits (139), Expect = 1e-007
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     CLRT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|Q6DE72|LIS1A_XENLA Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-a
        PE=2 SV=3

          Length = 410

 Score =  57 bits (137), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit
        alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2

          Length = 410

 Score =  57 bits (137), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit
        alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2

          Length = 410

 Score =  57 bits (137), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit
        alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3

          Length = 410

 Score =  57 bits (137), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
        OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2

          Length = 410

 Score =  57 bits (137), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1
        PE=2 SV=3

          Length = 410

 Score =  57 bits (137), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit
        alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2

          Length = 410

 Score =  57 bits (136), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>sp|Q9PTR5|LIS1_CHICK Platelet-activating factor acetylhydrolase IB subunit
        alpha OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3

          Length = 410

 Score =  57 bits (136), Expect = 2e-007
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 567 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDMSDMLCLRTFTKLDSPVRTISFNHSG 388
           TL  HT     I+ D  G+  A  SAD  + LWD     C+RT    D  V +++   +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 387 EYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKSAKYY 220
           ++I SAS D  I +  VQTG  V      R  +  V  N    L+A   +D++ + +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,892,683,958
Number of Sequences: 518415
Number of Extensions: 92892683958
Number of Successful Extensions: 611291351
Number of sequences better than 0.0: 0