BLASTX 7.6.2
Query= UN22722 /QuerySize=908
(907 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 396 2e-110
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 346 2e-095
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 314 7e-086
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 278 3e-075
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 54 2e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 51 8e-007
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 396 bits (1015), Expect = 2e-110
Identities = 194/221 (87%), Positives = 203/221 (91%), Gaps = 9/221 (4%)
Frame = +1
Query: 67 MEEEEHEVYGGEIPDVGEMDGDM-------DMTAADDDAAKELDEMKKRLKEIEDEAAAL 225
MEEEEHEVYGGEIPDVGEMDGDM DM AADDDA KELDEMKKRLKE+EDEAAAL
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60
Query: 226 REMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHR 405
REMQAKVEK+MG QD ++AA+QAGKEEVDARSVFVGNVDYACTPEEVQQHFQ+CGTVHR
Sbjct: 61 REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 120
Query: 406 VTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRR 585
VTILTDKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV+ KRTNVPGLKQFRGRR
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRR 180
Query: 586 FNPYMG--FRRPFMSPYMYSPYGYGKVPRFRRPMRYMPYQ* 702
FNPYMG FRRPFMSPYMYSPYGYGK PRFRRPMRYMPYQ*
Sbjct: 181 FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPYQ* 221
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 346 bits (885), Expect = 2e-095
Identities = 171/218 (78%), Positives = 191/218 (87%), Gaps = 6/218 (2%)
Frame = +1
Query: 67 MEEEEHEVYGGEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALREMQ 237
MEEEEHEVYGGEIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAAALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 238 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTI 414
AKVEK+MG QD ++AA+Q GKEEVDARSV+VGNVDYACTPEEVQ HFQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 415 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRRFNP 594
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV PKRTNVPG+KQ+ RFNP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180
Query: 595 YMG--FRRPFMSPYMYSPYGYGKVPRFRRPMRYMPYQ* 702
MG FRRPF+ PY YSPYGYGK PRFRRPMRYMPYQ*
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPYQ* 218
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 314 bits (803), Expect = 7e-086
Identities = 157/202 (77%), Positives = 177/202 (87%), Gaps = 6/202 (2%)
Frame = +1
Query: 67 MEEEEHEVYGGEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALREMQ 237
MEEEEHEVYGGEIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAAALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 238 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTI 414
AKVEK+MG QD ++AA+Q GKEEVDARSV+VGNVDYACTPEEVQ HFQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 415 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRRFNP 594
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV PKRTNVPG+KQ+ RFNP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180
Query: 595 YMG--FRRPFMSPYMYSPYGYG 654
MG FRRPF+ PY YSPYGYG
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 278 bits (711), Expect = 3e-075
Identities = 147/228 (64%), Positives = 171/228 (75%), Gaps = 24/228 (10%)
Frame = +1
Query: 70 EEEEHEVYGGEIP--DVGEMD--------GDMDMTAADDD-----AAKELDEMKKRLKEI 204
+E+EHEVYGGEIP + GEMD G+ A D++ ++++L++MKKR+KEI
Sbjct: 5 DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64
Query: 205 EDEAAALREMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQHFQ 384
E+EA ALREMQAK EKDMG + A KEEVD+RS++VGNVDYACTPEEVQQHFQ
Sbjct: 65 EEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQ 124
Query: 385 SCGTVHRVTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGL 564
SCGTV+RVTILTDKFGQPKGFAYVEFVE EA+Q +L LNESELHGRQIKV KRTNVPG+
Sbjct: 125 SCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGM 184
Query: 565 KQF--RGRRFNPYMGFRR--PFMSPYMYSPYGYGKVPRFRRPMRYMPY 696
+QF RGR F P GF PF Y PY YG+VPRFRRPMRY PY
Sbjct: 185 RQFRGRGRPFRPMRGFMPGVPF-----YPPYAYGRVPRFRRPMRYRPY 227
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 54 bits (127), Expect = 2e-007
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +1
Query: 322 SVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDKF-GQPKGFAYVEFVEAEAIQEALQ- 495
S+ V N+ C PEE+++ F+ G V V I D + GQP+GFA+VEFV+A EA +
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRS 107
Query: 496 LNESELHGRQIKVM 537
+N GR+I V+
Sbjct: 108 MNRRSFAGREITVV 121
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 51 bits (121), Expect = 8e-007
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 310 VDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDK-FGQPKGFAYVEFVEAEAIQE 486
+ + +FVG + Y+ +++ F G V I+ D+ G+ +GFA+V F E
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 487 ALQLNESELHGRQIKV 534
A+QL+ +LHGR+I+V
Sbjct: 91 AMQLDGQDLHGRRIRV 106
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,787,811,215
Number of Sequences: 33410
Number of Extensions: 11787811215
Number of Successful Extensions: 381176948
Number of sequences better than 0.0: 0
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