BLASTX 7.6.2
Query= UN22770 /QuerySize=2154
(2153 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 304 2e-081
sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo ... 189 8e-047
sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus m... 189 8e-047
sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos t... 187 4e-046
sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenop... 184 2e-045
sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio... 174 3e-042
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 166 7e-040
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 164 2e-039
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 157 3e-037
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 156 6e-037
sp|Q9UUF1|YNF8_SCHPO Deoxyribonuclease Tat-D OS=Schizosaccharomy... 148 2e-034
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 101 4e-020
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 100 7e-020
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 98 2e-019
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 94 4e-018
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 87 4e-016
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 324
Score = 304 bits (778), Expect = 2e-081
Identities = 155/244 (63%), Positives = 199/244 (81%), Gaps = 4/244 (1%)
Frame = +3
Query: 216 DTEDELPVASEDEEEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGTVVD 395
D E+E+ +++E+EEE EE++ ++ S E GRLYVGNLP+++TSS+LS++F +AGTV +
Sbjct: 84 DDEEEVALSAEEEEEIEEKE-ERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVAN 142
Query: 396 VQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMR 575
V+IVYD+VTDRSRGF FVTMGS+EEAKEAI++F+ SQ+GGRTVKVNFPEVPRGGEREVM
Sbjct: 143 VEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMS 202
Query: 576 AVKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGFG 755
A KIR + +VDSPHKLY NL W LTSQGL+DAFADQPG + AKV+Y+R SGRSRGFG
Sbjct: 203 A-KIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFG 261
Query: 756 FVSFESAQDLQSALRAMNGVEVEGRELRLNLASERATVSRPFVTQVETEEGNGLESSEVL 935
F++F SA+ + SAL MN VE+EGR LRLN+A ++A VS P V VET N ++SE+L
Sbjct: 262 FITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSSPPV--VETSPENDSDNSELL 319
Query: 936 STIS 947
S++S
Sbjct: 320 SSLS 323
>sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo sapiens
GN=TATDN1 PE=1 SV=2
Length = 297
Score = 189 bits (479), Expect = 8e-047
Identities = 90/170 (52%), Positives = 125/170 (73%), Gaps = 3/170 (1%)
Frame = -2
Query: 2107 MASLRMIDIAVNFTDGMFKGVYHGKNCHLPDIATVLNRAWSAGVDRIIVTGGSLEESREA 1928
M+ + IDI +N TD MF+G+Y G H D+ V+ RA GV + ++TGG+L++S++A
Sbjct: 1 MSRFKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDA 60
Query: 1927 LAIAETDARLFCTVGVHPTRCNEFEESGDPEKHYQDLFSLANEGMQKGKVVAIGECGLDY 1748
L +A+T+ F TVG HPTRC EFE++ +P+ + ++L +LA KGKVVAIGECGLD+
Sbjct: 61 LHLAQTNGMFFSTVGCHPTRCGEFEKN-NPDLYLKELLNLAEN--NKGKVVAIGECGLDF 117
Query: 1747 DRLQFCPADIQKKYFEKQFELAYATKLPMFLHMRAAAADFCEIVERNKNR 1598
DRLQFCP D Q KYFEKQFEL+ TKLPMFLH R + A+F +I++RN++R
Sbjct: 118 DRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDR 167
>sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus musculus
GN=Tatdn1 PE=2 SV=1
Length = 295
Score = 189 bits (479), Expect = 8e-047
Identities = 90/171 (52%), Positives = 123/171 (71%), Gaps = 3/171 (1%)
Frame = -2
Query: 2107 MASLRMIDIAVNFTDGMFKGVYHGKNCHLPDIATVLNRAWSAGVDRIIVTGGSLEESREA 1928
M+ + +DI +N TD MF+G+Y G H D+ V+ RA GV + ++TGGSL++S++A
Sbjct: 1 MSLFKFVDIGINLTDPMFRGIYRGVQKHQDDLQDVIERAIQIGVKKFMITGGSLQDSKDA 60
Query: 1927 LAIAETDARLFCTVGVHPTRCNEFEESGDPEKHYQDLFSLANEGMQKGKVVAIGECGLDY 1748
L +A+T+ F TVG HPTRC+EFE+ G P+++ L SLA KGKVVAIGECGLD+
Sbjct: 61 LQLAQTNDMFFSTVGCHPTRCDEFEK-GSPDQYLAGLLSLAEN--NKGKVVAIGECGLDF 117
Query: 1747 DRLQFCPADIQKKYFEKQFELAYATKLPMFLHMRAAAADFCEIVERNKNRF 1595
DRLQFCP D Q KYFEKQFEL+ T+LPMFLH R + +F +I+ RN++R+
Sbjct: 118 DRLQFCPKDTQLKYFEKQFELSEQTQLPMFLHCRNSHTEFLDIMRRNRDRY 168
>sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1
PE=2 SV=1
Length = 297
Score = 187 bits (473), Expect = 4e-046
Identities = 89/170 (52%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Frame = -2
Query: 2107 MASLRMIDIAVNFTDGMFKGVYHGKNCHLPDIATVLNRAWSAGVDRIIVTGGSLEESREA 1928
M+ + +DI +N TD MF+G+Y G H D+ V+ RA GV + ++TGG+L++S++A
Sbjct: 1 MSRFKFVDIGINLTDPMFRGIYRGVQKHQDDLQDVIERAVQIGVKKFMITGGNLQDSKDA 60
Query: 1927 LAIAETDARLFCTVGVHPTRCNEFEESGDPEKHYQDLFSLANEGMQKGKVVAIGECGLDY 1748
L +A+T+ F TVG HPTRC+EFE++ DP+ + +L +LA KGKVVAIGECGLD+
Sbjct: 61 LHLAQTNDMFFSTVGCHPTRCDEFEKN-DPDHYLMELLNLAES--NKGKVVAIGECGLDF 117
Query: 1747 DRLQFCPADIQKKYFEKQFELAYATKLPMFLHMRAAAADFCEIVERNKNR 1598
DRLQFC D Q KYFEKQFEL+ TKLPMFLH R + A+F +I+ RN++R
Sbjct: 118 DRLQFCSKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMRRNRDR 167
Score = 131 bits (327), Expect = 3e-029
Identities = 64/139 (46%), Positives = 97/139 (69%), Gaps = 4/139 (2%)
Frame = -3
Query: 1617 LKETRTGSPGGVAHSFTGSALDRDKLLSFDNMYIGVNGCSLKTAENLDVMKEIPVERMMI 1438
++ R GGV HSF G+ L+ +YIG NGCSLKT NL+V+K IP E++MI
Sbjct: 161 MRRNRDRCVGGVVHSFDGTKEAAAALMDL-GLYIGFNGCSLKTEANLEVLKSIPSEKLMI 219
Query: 1437 ETDSPYCEIKNTHAGMKFVKSTWPSKKKEKYDQECIVKGRNEPCLVRQVLEVVAGHKGIG 1258
ETD+P+C +KNTHAG K++K+++P+KK K++ +K RNEPC + Q+LE+++ +
Sbjct: 220 ETDAPWCGVKNTHAGSKYIKTSFPTKK--KWENGHCLKDRNEPCHIIQILEIMSAVRD-E 276
Query: 1257 DINQLSSTLYHNTCRVFFP 1201
D +L++TLY+NT ++FFP
Sbjct: 277 DPLELANTLYNNTIKIFFP 295
>sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenopus laevis
GN=tatdn1 PE=2 SV=1
Length = 297
Score = 184 bits (467), Expect = 2e-045
Identities = 87/170 (51%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Frame = -2
Query: 2107 MASLRMIDIAVNFTDGMFKGVYHGKNCHLPDIATVLNRAWSAGVDRIIVTGGSLEESREA 1928
M+ R IDI +N TD MF+G+Y G H D A ++ RA GV + ++TGG+L ES+EA
Sbjct: 1 MSLYRFIDIGINLTDPMFRGLYRGTRKHQDDFADIIERAVRTGVQKFMITGGNLHESKEA 60
Query: 1927 LAIAETDARLFCTVGVHPTRCNEFEESGDPEKHYQDLFSLANEGMQKGKVVAIGECGLDY 1748
+ +A+++ R + TVG HPTRC EFE+ GDP+++ +L +L + KGKVVA+GECGLD+
Sbjct: 61 IQLAQSNDRFYSTVGCHPTRCGEFEQ-GDPDQYLAELQNLLED--NKGKVVAVGECGLDF 117
Query: 1747 DRLQFCPADIQKKYFEKQFELAYATKLPMFLHMRAAAADFCEIVERNKNR 1598
DRL+FC + Q KYFEKQF+LA ++LPMFLH R A +F EI++RN++R
Sbjct: 118 DRLEFCSKETQLKYFEKQFDLAERSRLPMFLHCRNAHKEFLEIMQRNRDR 167
Score = 144 bits (362), Expect = 3e-033
Identities = 73/153 (47%), Positives = 105/153 (68%), Gaps = 4/153 (2%)
Frame = -3
Query: 1659 FYICEQLLQISVKSLKETRTGSPGGVAHSFTGSALDRDKLLSFDNMYIGVNGCSLKTAEN 1480
F C + ++ ++ R GGV HSF G+ D + +++ D +YIG+NGCSLKT N
Sbjct: 147 FLHCRNAHKEFLEIMQRNRDRCVGGVVHSFDGTKEDAEAIIALD-LYIGINGCSLKTESN 205
Query: 1479 LDVMKEIPVERMMIETDSPYCEIKNTHAGMKFVKSTWPSKKKEKYDQECIVKGRNEPCLV 1300
LDV+K IP ER+MIETD+P+C +KNTHAG K VK+T+P+KK K++ +K RNEPC +
Sbjct: 206 LDVLKSIPSERLMIETDAPWCGVKNTHAGSKLVKTTFPTKK--KWESGHCLKDRNEPCHI 263
Query: 1299 RQVLEVVAGHKGIGDINQLSSTLYHNTCRVFFP 1201
QVLE++A + + +LS TLY+NT ++FFP
Sbjct: 264 IQVLEIMASAREEEPL-ELSKTLYNNTLKLFFP 295
>sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio rerio
GN=tatdn1 PE=2 SV=1
Length = 298
Score = 174 bits (440), Expect = 3e-042
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Frame = -2
Query: 2107 MASLRMIDIAVNFTDGMFKGVYHGKNCHLPDIATVLNRAWSAGVDRIIVTGGSLEESREA 1928
M + R IDI +N TD MF+GVY G H D A V+ RA GV + I+TGG+LE+SR A
Sbjct: 1 MTNFRFIDIGINLTDPMFRGVYRGTQKHEDDFAEVVERALQVGVQKFIITGGNLEDSRAA 60
Query: 1927 LAIAETDARLFCTVGVHPTRCNEFEESGDPEKHYQDLFSLANEGMQKGKVVAIGECGLDY 1748
L + T + F TVG HPTRC+EF++ G +++ L L Q KVVA+GECGLD+
Sbjct: 61 LTLTHTREQFFSTVGCHPTRCSEFDDQGS-DQYLSSLLDLTVSNTQ--KVVAVGECGLDF 117
Query: 1747 DRLQFCPADIQKKYFEKQFELAYATKLPMFLHMRAAAADFCEIVERNKNR 1598
DRL+FCP + Q +YF+ QF+LA A+ LPMFLH R A +F +I+ RN+ R
Sbjct: 118 DRLEFCPKETQLRYFQLQFDLAEASGLPMFLHCRNAHTEFIDIMRRNRQR 167
Score = 138 bits (347), Expect = 2e-031
Identities = 75/152 (49%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Frame = -3
Query: 1659 FYICEQLLQISVKSLKETRTGSPGGVAHSFTGSALDRDKLLSFDNMYIGVNGCSLKTAEN 1480
F C + ++ R GGV HSF GS D LL D +YIG+NGCSLKTAEN
Sbjct: 147 FLHCRNAHTEFIDIMRRNRQRCVGGVVHSFDGSQQDAAALLDLD-LYIGINGCSLKTAEN 205
Query: 1479 LDVMKEIPVERMMIETDSPYCEIKNTHAGMKFVKSTWPSKKKEKYDQECIVKGRNEPCLV 1300
L+VMK IP +R+MIETD+P+C IKNTHAG K +K+++P+KK K++ VK RNEPC +
Sbjct: 206 LEVMKSIPSDRLMIETDAPWCGIKNTHAGAKLIKTSFPTKK--KWETGHCVKDRNEPCHI 263
Query: 1299 RQVLEVVAGHKGIGDINQLSSTLYHNTCRVFF 1204
QVLEV+A + D L+ T+++NT +FF
Sbjct: 264 IQVLEVMAAVRE-EDPLDLAETIFNNTDTLFF 294
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 166 bits (419), Expect = 7e-040
Identities = 83/203 (40%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
Frame = +3
Query: 252 EEEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRS 431
E+ E+ +D + + + +++VGNLP++ S+ L++LF +AG V V+++YDK+T RS
Sbjct: 68 EDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRS 127
Query: 432 RGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAVKIRDGNRSYV 611
RGFGFVTM S EE + A Q FN ++ GR ++VN P E R G+
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGS---F 184
Query: 612 DSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQS 791
DS +++Y GNL W + L+ F++Q V+ AKVVY+RDSGRSRGFGFV++ SA+++ +
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244
Query: 792 ALRAMNGVEVEGRELRLNLASER 860
A+ +++GV++ GR +R++ A R
Sbjct: 245 AIESLDGVDLNGRAIRVSPAEAR 267
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 164 bits (415), Expect = 2e-039
Identities = 97/257 (37%), Positives = 152/257 (59%), Gaps = 14/257 (5%)
Frame = +3
Query: 99 SSLRLFNPFPPKSFKLVASFLNPISLHPNIRRHRFSCAADTEDELPVASEDEEEEEEEDV 278
+SL F+ PP S L S +P S FS + LP + E+ E+ ++
Sbjct: 28 TSLSFFS-LPPSSLNL--SLSSPSSC--------FSSRFVRKVTLPDFDQIEDVEDGDEG 76
Query: 279 KQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMG 458
+ + + +++VGNL ++ S+ L++LF +AG V V+++YDK+T RSRGFGFVTM
Sbjct: 77 VEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMS 136
Query: 459 SIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRA-VKIRDGNR--SYVDSPHKL 629
S EE + A Q FN ++ GR ++VN P E R R G+R DS +++
Sbjct: 137 SKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRV 196
Query: 630 YAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGFGFVSFESAQDLQSALRAMN 809
Y GNL W + L+ F++Q V+ AKVVY+RDSGRSRGFGFV++ SA+++ +A+ +++
Sbjct: 197 YVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLD 256
Query: 810 GVEVEGRELRLNLASER 860
GV++ GR +R++ A R
Sbjct: 257 GVDLNGRAIRVSPAEAR 273
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 157 bits (396), Expect = 3e-037
Identities = 84/219 (38%), Positives = 131/219 (59%), Gaps = 17/219 (7%)
Frame = +3
Query: 216 DTEDELPVASEDEEEEEEEDVKQTTQAS-------GEEGRLYVGNLPYTITSSELSQLFR 374
++E + E +E E DV + + EE +L+VGNL Y + S L+ LF
Sbjct: 112 ESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFE 171
Query: 375 QAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRG 554
QAGTV +++Y++ TD+SRGFGFVTM S++EA+ A++ FN + GR + VN PRG
Sbjct: 172 QAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRG 230
Query: 555 GEREVMRAVKIRDGNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDS 734
E RA ++ + ++Y GNL WD+ + L+ F++ V+ A+VVY+R++
Sbjct: 231 SRPE--RAPRV-------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRET 281
Query: 735 GRSRGFGFVSFESAQDLQSALRAMNGVEVEGRELRLNLA 851
GRSRGFGFV+ +L A+ A++G +EGR +R+N+A
Sbjct: 282 GRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 156 bits (394), Expect = 6e-037
Identities = 89/266 (33%), Positives = 150/266 (56%), Gaps = 22/266 (8%)
Frame = +3
Query: 90 PLFSSLRLFNPFP-----PKSFKLVASFLNPISLHPNIRRHRFSCAADTEDELPVASEDE 254
P F++ + + +P K L +S +SL+ + + +ED+ + +D+
Sbjct: 12 PFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSLNKRTTQFPTFVSVLSEDDNTLVLDDQ 71
Query: 255 EE-------EEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYD 413
E+ E + Q E+ +L+VGNLPY I S L+QLF+QAG V +++Y+
Sbjct: 72 EQGGDFPSFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYN 131
Query: 414 KVTDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAVKIRD 593
+ TDRSRGFGFVTM ++EEA +A+++++ + GR + VN PRG E RA +
Sbjct: 132 RETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVN-KAAPRGSRPE--RAPRT-- 186
Query: 594 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGFGFVSFES 773
+++Y GN+ WD+ L+ F++ V+ A+VV++R+SGRSRGFGFV+ S
Sbjct: 187 -----FQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSS 241
Query: 774 AQDLQSALRAMNGVEVEGRELRLNLA 851
++ A+ ++G ++GR +R+N A
Sbjct: 242 EAEMSEAIANLDGQTLDGRTIRVNAA 267
>sp|Q9UUF1|YNF8_SCHPO Deoxyribonuclease Tat-D OS=Schizosaccharomyces pombe
GN=SPBC17A3.08 PE=2 SV=1
Length = 312
Score = 148 bits (373), Expect = 2e-034
Identities = 77/165 (46%), Positives = 106/165 (64%), Gaps = 1/165 (0%)
Frame = -2
Query: 2101 SLRMIDIAVNFTDGMFKGVYHGKNCHLPDIATVLNRAWSAGVDRIIVTGGSLEESREALA 1922
SLR DI N TD +F+G+YH K H D ++++RA + GV+++++TG ++E S EAL
Sbjct: 11 SLRFYDIGYNATDPVFRGIYHEKLKHPDDFDSIISRAKAVGVEKMMITGDNVENSEEALN 70
Query: 1921 IAETDARLFCTVGVHPTRCNEF-EESGDPEKHYQDLFSLANEGMQKGKVVAIGECGLDYD 1745
+A TVGVHP + F S PE + L +LAN+G GKVVA GE GLDYD
Sbjct: 71 LATNYECFTSTVGVHPCQAQCFLRHSEGPEDYLVKLEALANKGKASGKVVAFGEFGLDYD 130
Query: 1744 RLQFCPADIQKKYFEKQFELAYATKLPMFLHMRAAAADFCEIVER 1610
RL + PAD+QK YFE+Q ++A +LP+FLH R A DF I+E+
Sbjct: 131 RLHYAPADVQKMYFEEQLKVAVRVQLPLFLHSRNAENDFFAILEK 175
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 101 bits (249), Expect = 4e-020
Identities = 46/99 (46%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Frame = +3
Query: 588 RDGNRSY--------VDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRS 743
RDGN S+ VDS +++Y GNL W + LK+ F++Q V+ AKVVY+RDSGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248
Query: 744 RGFGFVSFESAQDLQSALRAMNGVEVEGRELRLNLASER 860
RGFGFV++ SA+++ A+ ++NG++++GR +R++ A ER
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 100 bits (247), Expect = 7e-020
Identities = 46/99 (46%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Frame = +3
Query: 588 RDGNRSY--------VDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRS 743
RDGN S+ VDS +++Y GNL W + LK+ F++Q V+ AKVVY+RDSGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247
Query: 744 RGFGFVSFESAQDLQSALRAMNGVEVEGRELRLNLASER 860
RGFGFV++ S++++ A+ ++NGV+++GR +R++ A ER
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 98 bits (243), Expect = 2e-019
Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
Frame = +3
Query: 240 ASEDEEEEEEEDVKQTTQASGEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKV 419
A E +E E +E+ ++ Q E+ +L+VGNLPY + S L++LF QAG V +++Y++
Sbjct: 114 AGESDEVEADEE-EEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRD 172
Query: 420 TDRSRGFGFVTMGSIEEAKEAIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAVKIRDGN 599
TD+SRGFGFVTM ++EEA++A++M+N + GR + VN + R GER
Sbjct: 173 TDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVN--KAARRGERPERPPRTFEQSY 230
Query: 600 RSYV 611
R YV
Sbjct: 231 RIYV 234
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 94 bits (232), Expect = 4e-018
Identities = 65/176 (36%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Frame = +3
Query: 126 PPKSFKLVASFLNPISLHPNIRRHRFSCAADTEDELPVASEDEEEEE--EEDVKQTTQAS 299
P SFK LN S+ +I S A+ + + SE E EE+ + Q+
Sbjct: 33 PSLSFK-----LNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFADVAPPKEQSF 87
Query: 300 GEEGRLYVGNLPYTITSSELSQLFRQAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKE 479
+ +L+VGNLP+ + S++L+QLF AG V V+++YDK+T RSRGFGFVTM S+ E +
Sbjct: 88 SADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEA 147
Query: 480 AIQMFNTSQIGGRTVKVNFPEVPRGGEREVMRAVKIRDGNRSYVDSPHKLYAGNLG 647
A Q FN ++ GR ++VN P E R G RS S Y G G
Sbjct: 148 AAQQFNGYELDGRPLRVNAGPPPPKREDGFSR------GPRSSFGSSGSGYGGGGG 197
Score = 88 bits (217), Expect = 2e-016
Identities = 36/89 (40%), Positives = 67/89 (75%)
Frame = +3
Query: 594 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGFGFVSFES 773
G S S +++Y GNL W + L+ F++Q V+ A+V+Y+RDSGRS+GFGFV+++S
Sbjct: 195 GGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDS 254
Query: 774 AQDLQSALRAMNGVEVEGRELRLNLASER 860
+Q++Q+A+++++G +++GR++R++ A R
Sbjct: 255 SQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 87 bits (214), Expect = 4e-016
Identities = 38/89 (42%), Positives = 64/89 (71%)
Frame = +3
Query: 594 GNRSYVDSPHKLYAGNLGWDLTSQGLKDAFADQPGVLGAKVVYERDSGRSRGFGFVSFES 773
G+ S S ++LY GNL W + L++ F +Q V+ A+V+Y+RDSGRS+GFGFV+ S
Sbjct: 248 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 307
Query: 774 AQDLQSALRAMNGVEVEGRELRLNLASER 860
+Q++Q A+ ++NG +++GR++R++ A R
Sbjct: 308 SQEVQKAINSLNGADLDGRQIRVSEAEAR 336
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,819,846,109
Number of Sequences: 518415
Number of Extensions: 95819846109
Number of Successful Extensions: 619733697
Number of sequences better than 0.0: 0
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