BLASTX 7.6.2

Query= UN22806 /QuerySize=1623
        (1622 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G41880.1 | Symbols: POLA3, POLA4 | POLA3; DNA ...    656   1e-188

>TAIR9_protein||AT5G41880.1 | Symbols: POLA3, POLA4 | POLA3; DNA primase |
        chr5:16761117-16764074 FORWARD

          Length = 438

 Score =  656 bits (1691), Expect = 1e-188
 Identities = 337/424 (79%), Positives = 364/424 (85%), Gaps = 13/424 (3%)
 Frame = -3

Query: 1431 NLFPYTDLHKWLSYGHDGKHPGCDEYYFGRREFSFTLENDVYLRYKSFKTASSMEDAIKS 1252
            NLFPYTD+HKWLSYGHDGKHPGCDEYYFGRREFSFTLENDVYLRYKSFK AS ME AIKS
Sbjct:   23 NLFPYTDIHKWLSYGHDGKHPGCDEYYFGRREFSFTLENDVYLRYKSFKNASLMEAAIKS 82

Query: 1251 SFPYKIDIGAVYSVDPDKRHAYSQTGTNVFTPVERELVFDIDITDYDDVRYCCSEADVCS 1072
            +FPYKIDIGAVYSVDPDKRHAY+Q+GTN+FTPVERELVFDIDITDYDDVRYCCS ADVCS
Sbjct:   83 NFPYKIDIGAVYSVDPDKRHAYAQSGTNLFTPVERELVFDIDITDYDDVRYCCSGADVCS 142

Query: 1071 KCWPLMTVAIKVIHTSLTEGFRFQTHPLGVQWTSWSSLLGL-----*S*SSHDD**TKVS 907
            KCWPLMTVAIKVI TSL E F F+ H L V    +S   G+      + +       + +
Sbjct:  143 KCWPLMTVAIKVIDTSLREDFGFK-HILWV----FSGRRGVHCWVCDAKARRLTNEQRSA 197

Query:  906 SC*ILPCL*GNENNARKVVLMGYSLHPFLARSYVDYLKGFFEGELQATQSIFSSKDKYDK 727
                     GNENNA+KV LMG+SLHPFLARSYVD++K FFEGELQATQSIFSSK+KY+K
Sbjct:  198 VAEYFRVYKGNENNAKKVDLMGHSLHPFLARSYVDFIKSFFEGELQATQSIFSSKEKYEK 257

Query:  726 ILGMISDEDIQSELREKWENSAARSSLSEEAISLVRWEQLKNTLHSKKHKAPTLRMCVEE 547
            ILGMI+DEDIQ++LR KWENS ARSSLSEEA SL+RWEQLK  L SK++KA +LR CVEE
Sbjct:  258 ILGMITDEDIQADLRGKWENS-ARSSLSEEATSLLRWEQLKKALQSKRNKALSLRTCVEE 316

Query:  546 IVFTFTYPRIDLEVSKQMNHLLKALFCVHPKTGRVCVPIDPNNCDEFDPLAVPTLPQLIE 367
            IVFTFTYPRIDLEVSKQMNHLLKA FCVHPKTGRVCVPIDPNNCDEFDPLAVPTL QLIE
Sbjct:  317 IVFTFTYPRIDLEVSKQMNHLLKAPFCVHPKTGRVCVPIDPNNCDEFDPLAVPTLSQLIE 376

Query:  366 EINSGGSRMDVDDDEEDSDRSLLGKSIKFFRSSFLEPLLKSCKEEIETSYKTKIGKSKDS 187
            EINSGG RMDVDDD  DSD SLLGKSIKFFRSSFLEPLLKSCKEEIE+SYKTKI K+KDS
Sbjct:  377 EINSGGLRMDVDDD--DSDSSLLGKSIKFFRSSFLEPLLKSCKEEIESSYKTKIAKTKDS 434

Query:  186 FSW* 175
            FSW*
Sbjct:  435 FSW* 438


 Score =  97 bits (239), Expect = 3e-020
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = -1

Query: 1016 KDFGFKHILWVFSGRRGVHCWVCDPKARTMTNEQRSAVAEYFRVYK 879
            +DFGFKHILWVFSGRRGVHCWVCD KAR +TNEQRSAVAEYFRVYK
Sbjct:  161 EDFGFKHILWVFSGRRGVHCWVCDAKARRLTNEQRSAVAEYFRVYK 206

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,830,892,406
Number of Sequences: 33410
Number of Extensions: 11830892406
Number of Successful Extensions: 381251954
Number of sequences better than 0.0: 0