BLASTX 7.6.2
Query= UN22814 /QuerySize=579
(578 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18379085|ref|NP_563682.1| small nuclear ribonucleoprotein-lik... 187 1e-045
gi|224073260|ref|XP_002304049.1| predicted protein [Populus tric... 185 3e-045
gi|3850571|gb|AAC72111.1| Similar to gb|U85207 snRNP core Sm pro... 185 4e-045
gi|21553911|gb|AAM62994.1| snRNP core Sm protein Sm-X5-like prot... 184 7e-045
gi|118483945|gb|ABK93861.1| unknown [Populus trichocarpa] 183 1e-044
gi|255567664|ref|XP_002524811.1| Speckle-type POZ protein, putat... 183 1e-044
gi|225436910|ref|XP_002274453.1| PREDICTED: hypothetical protein... 183 1e-044
gi|296086695|emb|CBI32330.3| unnamed protein product [Vitis vini... 183 1e-044
gi|116780108|gb|ABK21554.1| unknown [Picea sitchensis] 179 2e-043
gi|226510250|ref|NP_001152698.1| snRNP core Sm protein Sm-X5-lik... 179 3e-043
gi|297607988|ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japo... 178 4e-043
gi|37806009|dbj|BAC99422.1| putative snRNP core protein SMX5d [O... 178 7e-043
gi|218200492|gb|EEC82919.1| hypothetical protein OsI_27848 [Oryz... 176 2e-042
gi|255626583|gb|ACU13636.1| unknown [Glycine max] 174 8e-042
gi|168061307|ref|XP_001782631.1| predicted protein [Physcomitrel... 172 4e-041
gi|302783196|ref|XP_002973371.1| hypothetical protein SELMODRAFT... 163 2e-038
gi|307105968|gb|EFN54215.1| hypothetical protein CHLNCDRAFT_2493... 161 7e-038
gi|159464231|ref|XP_001690345.1| Sm-D1 protein [Chlamydomonas re... 154 6e-036
gi|145340671|ref|XP_001415444.1| predicted protein [Ostreococcus... 151 5e-035
gi|303273532|ref|XP_003056127.1| predicted protein [Micromonas p... 148 4e-034
>gi|18379085|ref|NP_563682.1| small nuclear ribonucleoprotein-like protein
[Arabidopsis thaliana]
Length = 93
Score = 187 bits (473), Expect = 1e-045
Identities = 92/93 (98%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLP DGVDVDLLHDAARREARGG
Sbjct: 61 FIRGSVVRYVQLPKDGVDVDLLHDAARREARGG 93
>gi|224073260|ref|XP_002304049.1| predicted protein [Populus trichocarpa]
Length = 93
Score = 185 bits (469), Expect = 3e-045
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLPP+GVDVDLLHDA RREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93
>gi|3850571|gb|AAC72111.1| Similar to gb|U85207 snRNP core Sm protein homolog
Sm-X5 from Mus musculus. EST gb|AA612141 comes from this gene
[Arabidopsis thaliana]
Length = 114
Score = 185 bits (468), Expect = 4e-045
Identities = 91/92 (98%)
Frame = +2
Query: 149 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 328
LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF
Sbjct: 23 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 82
Query: 329 IRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
IRGSVVRYVQLP DGVDVDLLHDAARREARGG
Sbjct: 83 IRGSVVRYVQLPKDGVDVDLLHDAARREARGG 114
>gi|21553911|gb|AAM62994.1| snRNP core Sm protein Sm-X5-like protein
[Arabidopsis thaliana]
Length = 93
Score = 184 bits (466), Expect = 7e-045
Identities = 91/93 (97%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLP DGVDVDLLH AARREARGG
Sbjct: 61 FIRGSVVRYVQLPKDGVDVDLLHGAARREARGG 93
>gi|118483945|gb|ABK93861.1| unknown [Populus trichocarpa]
Length = 93
Score = 183 bits (464), Expect = 1e-044
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVG+EVTVELKNDLAIRG LHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGKEVTVELKNDLAIRGNLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLPP+GVDVDLLHDA RREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93
>gi|255567664|ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus
communis]
Length = 500
Score = 183 bits (464), Expect = 1e-044
Identities = 88/94 (93%), Positives = 92/94 (97%)
Frame = +2
Query: 143 KMLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 322
+ LFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 466
Query: 323 CFIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
CFIRGSVVRYVQLPP+GVD+DLLHDA RREARGG
Sbjct: 467 CFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500
>gi|225436910|ref|XP_002274453.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 93
Score = 183 bits (464), Expect = 1e-044
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLPP+GVD++LLHDA RREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93
>gi|296086695|emb|CBI32330.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 183 bits (464), Expect = 1e-044
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 45 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 104
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLPP+GVD++LLHDA RREARGG
Sbjct: 105 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 137
>gi|116780108|gb|ABK21554.1| unknown [Picea sitchensis]
Length = 93
Score = 179 bits (453), Expect = 2e-043
Identities = 86/93 (92%), Positives = 91/93 (97%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVV+QDKYPHMLSV+NC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVEQDKYPHMLSVKNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYV LPPDGVDVD+LHDA RREARGG
Sbjct: 61 FIRGSVVRYVLLPPDGVDVDILHDATRREARGG 93
>gi|226510250|ref|NP_001152698.1| snRNP core Sm protein Sm-X5-like protein [Zea
mays]
Length = 93
Score = 179 bits (452), Expect = 3e-043
Identities = 87/93 (93%), Positives = 90/93 (96%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYV LP DGVDVD+LHDA RREARGG
Sbjct: 61 FIRGSVVRYVLLPQDGVDVDILHDATRREARGG 93
>gi|297607988|ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japonica Group]
Length = 93
Score = 178 bits (451), Expect = 4e-043
Identities = 86/93 (92%), Positives = 90/93 (96%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYV LP DGVD+D+LHDA RREARGG
Sbjct: 61 FIRGSVVRYVLLPQDGVDIDILHDATRREARGG 93
>gi|37806009|dbj|BAC99422.1| putative snRNP core protein SMX5d [Oryza sativa
Japonica Group]
Length = 288
Score = 178 bits (449), Expect = 7e-043
Identities = 95/133 (71%), Positives = 103/133 (77%), Gaps = 20/133 (15%)
Frame = +2
Query: 47 RKSLPTLTFTFTFTFFFVV*LSRAEEGICRPRKM-------LFFSYFKDLVGQEVTVELK 205
R+ P ++T +F F IC P KM LFFSYFK+LVG+EVTVELK
Sbjct: 169 RRRRPAASWTRSFVF------------IC-PSKMFGDPVHWLFFSYFKELVGKEVTVELK 215
Query: 206 NDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPDGVDVD 385
NDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYV LP DGVD+D
Sbjct: 216 NDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDID 275
Query: 386 LLHDAARREARGG 424
+LHDA RREARGG
Sbjct: 276 ILHDATRREARGG 288
>gi|218200492|gb|EEC82919.1| hypothetical protein OsI_27848 [Oryza sativa Indica
Group]
Length = 120
Score = 176 bits (446), Expect = 2e-042
Identities = 85/92 (92%), Positives = 89/92 (96%)
Frame = +2
Query: 149 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 328
LFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF
Sbjct: 29 LFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 88
Query: 329 IRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
IRGSVVRYV LP DGVD+D+LHDA RREARGG
Sbjct: 89 IRGSVVRYVLLPQDGVDIDILHDATRREARGG 120
>gi|255626583|gb|ACU13636.1| unknown [Glycine max]
Length = 93
Score = 174 bits (440), Expect = 8e-042
Identities = 83/93 (89%), Positives = 90/93 (96%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFKDLVG+EV VELKNDLAI+GTLHSVDQYLNIKLENT VV+Q+KYPHMLSVRNC
Sbjct: 1 MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLPP+GVD++LLHDA RREARGG
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93
>gi|168061307|ref|XP_001782631.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 93
Score = 172 bits (434), Expect = 4e-041
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFK+LVG+EV VELKNDLAI G LHSVDQYLNIKLENTRVVD KYPHMLSV+NC
Sbjct: 1 MLFFSYFKELVGKEVIVELKNDLAISGILHSVDQYLNIKLENTRVVDDTKYPHMLSVKNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYVQLPPDGVDVD+LHDA RREARGG
Sbjct: 61 FIRGSVVRYVQLPPDGVDVDILHDATRREARGG 93
>gi|302783196|ref|XP_002973371.1| hypothetical protein SELMODRAFT_232056
[Selaginella moellendorffii]
Length = 93
Score = 163 bits (411), Expect = 2e-038
Identities = 78/92 (84%), Positives = 86/92 (93%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFSYFK+LVG+EVTVELKNDLAI G LHSVDQYLNIKLEN +VVD+ KYPHM+SV+NC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAITGVLHSVDQYLNIKLENIKVVDEIKYPHMMSVKNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARG 421
FIRGSVVRYVQLP DGVDV++LHDA RREARG
Sbjct: 61 FIRGSVVRYVQLPVDGVDVEILHDATRREARG 92
>gi|307105968|gb|EFN54215.1| hypothetical protein CHLNCDRAFT_24936 [Chlorella
variabilis]
Length = 93
Score = 161 bits (406), Expect = 7e-038
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLF+SYFK LVG+EVTVELKNDLAI GTLHSVDQYLNIKL N RVV++ KYPHMLSVR C
Sbjct: 1 MLFYSYFKTLVGKEVTVELKNDLAITGTLHSVDQYLNIKLNNIRVVNEQKYPHMLSVRAC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
F+RGSVVRYVQLPP VDV+LLHDA RREARGG
Sbjct: 61 FVRGSVVRYVQLPPGSVDVELLHDATRREARGG 93
>gi|159464231|ref|XP_001690345.1| Sm-D1 protein [Chlamydomonas reinhardtii]
Length = 93
Score = 154 bits (389), Expect = 6e-036
Identities = 75/93 (80%), Positives = 81/93 (87%)
Frame = +2
Query: 146 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 325
MLFFS FK LVG+EVTVELKNDL I G LHSVDQYLNIKL NTRV ++ KYPHM+SVRNC
Sbjct: 1 MLFFSLFKTLVGKEVTVELKNDLCISGALHSVDQYLNIKLTNTRVHNEQKYPHMMSVRNC 60
Query: 326 FIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 424
FIRGSVVRYV LPP VDV++LHDA RREARGG
Sbjct: 61 FIRGSVVRYVHLPPGAVDVEVLHDATRREARGG 93
>gi|145340671|ref|XP_001415444.1| predicted protein [Ostreococcus lucimarinus
CCE9901]
Length = 130
Score = 151 bits (381), Expect = 5e-035
Identities = 75/91 (82%), Positives = 80/91 (87%)
Frame = +2
Query: 149 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 328
LF+SYFK LVG+ VTVELKNDLAI GTL SVDQYLNIKLENTRV D+ +YPHM SVRNCF
Sbjct: 39 LFYSYFKTLVGKPVTVELKNDLAIAGTLVSVDQYLNIKLENTRVTDEARYPHMRSVRNCF 98
Query: 329 IRGSVVRYVQLPPDGVDVDLLHDAARREARG 421
IRGSVVRYVQLP VDVD+LHDA RREARG
Sbjct: 99 IRGSVVRYVQLPEAAVDVDILHDATRREARG 129
>gi|303273532|ref|XP_003056127.1| predicted protein [Micromonas pusilla
CCMP1545]
Length = 92
Score = 148 bits (373), Expect = 4e-034
Identities = 71/91 (78%), Positives = 81/91 (89%)
Frame = +2
Query: 149 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 328
LF+SYFK L+G++VTVELKNDLAI G L SVDQYLNIKL+ T VVD+ +YPHM SVR+CF
Sbjct: 1 LFYSYFKTLMGKQVTVELKNDLAITGLLRSVDQYLNIKLQETVVVDEARYPHMSSVRSCF 60
Query: 329 IRGSVVRYVQLPPDGVDVDLLHDAARREARG 421
IRGSVVRYVQLPPD VDVD+LHDA RR+ARG
Sbjct: 61 IRGSVVRYVQLPPDAVDVDILHDATRRDARG 91
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,758,012,895,071
Number of Sequences: 15229318
Number of Extensions: 2758012895071
Number of Successful Extensions: 660010853
Number of sequences better than 0.0: 0
|
