BLASTX 7.6.2
Query= UN22839 /QuerySize=721
(720 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G56200.1 | Symbols: emb1303 | emb1303 (embryo ... 246 1e-065
TAIR9_protein||AT1G56200.2 | Symbols: emb1303 | emb1303 (embryo ... 239 1e-063
TAIR9_protein||AT1G30475.1 | Symbols: | FUNCTIONS IN: molecular... 149 2e-036
TAIR9_protein||AT1G30475.2 | Symbols: | FUNCTIONS IN: molecular... 149 2e-036
TAIR9_protein||AT1G30475.3 | Symbols: | FUNCTIONS IN: molecular... 149 2e-036
TAIR9_protein||AT1G30475.4 | Symbols: | FUNCTIONS IN: molecular... 59 3e-009
>TAIR9_protein||AT1G56200.1 | Symbols: emb1303 | emb1303 (embryo defective 1303)
| chr1:21030852-21031886 FORWARD
Length = 155
Score = 246 bits (627), Expect = 1e-065
Identities = 129/158 (81%), Positives = 137/158 (86%), Gaps = 6/158 (3%)
Frame = +3
Query: 48 MAASILQASPLSVNINK-NVRIRSSGLVGGGIKRPDRVSSLSAVGMGLGLGLDSRKRSLL 224
MAASI+Q+SPLS N N RI SSG + GGIK +RVS LSAVG+ GLG SR++SLL
Sbjct: 3 MAASIIQSSPLSFNSNNAKPRIHSSGSL-GGIKSQNRVSPLSAVGLSSGLG--SRRKSLL 59
Query: 225 ICNSAANAKCSESQGQTQTVIRESPTITQAPVHSKEKSPSLDDGGDGFPPRDDGDGGGGG 404
IC+SA NAKCSE GQTQTV RESPTITQAPVHSKEKSPSLDDGGDGFPPRDDGDGGGGG
Sbjct: 60 ICHSAINAKCSE--GQTQTVTRESPTITQAPVHSKEKSPSLDDGGDGFPPRDDGDGGGGG 117
Query: 405 GGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR* 518
GGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR*
Sbjct: 118 GGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR* 155
>TAIR9_protein||AT1G56200.2 | Symbols: emb1303 | emb1303 (embryo defective 1303)
| chr1:21030852-21031886 FORWARD
Length = 152
Score = 239 bits (609), Expect = 1e-063
Identities = 125/154 (81%), Positives = 133/154 (86%), Gaps = 7/154 (4%)
Frame = +3
Query: 57 SILQASPLSVNINKNVRIRSSGLVGGGIKRPDRVSSLSAVGMGLGLGLDSRKRSLLICNS 236
SI+Q+SPLS N RI SSG + GGIK +RVS LSAVG+ GLG SR++SLLIC+S
Sbjct: 6 SIIQSSPLS--FNTKPRIHSSGSL-GGIKSQNRVSPLSAVGLSSGLG--SRRKSLLICHS 60
Query: 237 AANAKCSESQGQTQTVIRESPTITQAPVHSKEKSPSLDDGGDGFPPRDDGDGGGGGGGGG 416
A NAKCSE GQTQTV RESPTITQAPVHSKEKSPSLDDGGDGFPPRDDGDGGGGGGGGG
Sbjct: 61 AINAKCSE--GQTQTVTRESPTITQAPVHSKEKSPSLDDGGDGFPPRDDGDGGGGGGGGG 118
Query: 417 NWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR* 518
NWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR*
Sbjct: 119 NWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR* 152
>TAIR9_protein||AT1G30475.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 127 Blast hits to 127 proteins in 31 species:
Archae - 0; Bacteria - 14; Metazoa - 65; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:10788501-10789943 REVERSE
Length = 192
Score = 149 bits (375), Expect = 2e-036
Identities = 70/99 (70%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Frame = +3
Query: 198 LDSRKRSLLICNSAANAKCSESQGQTQTVIRESPTITQAPVHSKEKSPSLDDGGDGFPPR 377
+ KR + CNSA N+KC SQGQTQTV R+SPTITQAP H K KSP LDDGG+GFPPR
Sbjct: 92 VSKNKRPVFACNSALNSKC--SQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 149
Query: 378 DDGDGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEED 494
DDG GGGGGGGGG+ SGGFF FGFL F+G LKD EGE +
Sbjct: 150 DDGGGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGEHE 188
>TAIR9_protein||AT1G30475.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 121 Blast hits to 121 proteins in 30 species:
Archae - 0; Bacteria - 14; Metazoa - 59; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:10788501-10789717 REVERSE
Length = 163
Score = 149 bits (375), Expect = 2e-036
Identities = 70/99 (70%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Frame = +3
Query: 198 LDSRKRSLLICNSAANAKCSESQGQTQTVIRESPTITQAPVHSKEKSPSLDDGGDGFPPR 377
+ KR + CNSA N+KC SQGQTQTV R+SPTITQAP H K KSP LDDGG+GFPPR
Sbjct: 63 VSKNKRPVFACNSALNSKC--SQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 120
Query: 378 DDGDGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEED 494
DDG GGGGGGGGG+ SGGFF FGFL F+G LKD EGE +
Sbjct: 121 DDGGGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGEHE 159
>TAIR9_protein||AT1G30475.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 121 Blast hits to 121 proteins in 30 species:
Archae - 0; Bacteria - 14; Metazoa - 59; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:10788501-10789717 REVERSE
Length = 163
Score = 149 bits (375), Expect = 2e-036
Identities = 70/99 (70%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Frame = +3
Query: 198 LDSRKRSLLICNSAANAKCSESQGQTQTVIRESPTITQAPVHSKEKSPSLDDGGDGFPPR 377
+ KR + CNSA N+KC SQGQTQTV R+SPTITQAP H K KSP LDDGG+GFPPR
Sbjct: 63 VSKNKRPVFACNSALNSKC--SQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 120
Query: 378 DDGDGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEED 494
DDG GGGGGGGGG+ SGGFF FGFL F+G LKD EGE +
Sbjct: 121 DDGGGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGEHE 159
>TAIR9_protein||AT1G30475.4 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 15 Blast hits to 15 proteins in 2 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:10788821-10789717 REVERSE
Length = 133
Score = 59 bits (141), Expect = 3e-009
Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 198 LDSRKRSLLICNSAANAKCSESQGQTQTVIRESPTITQAPVHSKEKSPSL 347
+ KR + CNSA N+KC SQGQTQTV R+SPTITQAP H K P L
Sbjct: 63 VSKNKRPVFACNSALNSKC--SQGQTQTVTRQSPTITQAPTHGKLFHPLL 110
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,830,892,406
Number of Sequences: 33410
Number of Extensions: 11830892406
Number of Successful Extensions: 381251954
Number of sequences better than 0.0: 0
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