BLASTX 7.6.2
Query= UN22873 /QuerySize=657
(656 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G56170.1 | Symbols: | FUNCTIONS IN: molecular... 200 6e-052
TAIR9_protein||AT4G26466.1 | Symbols: LRE | LRE (LORELEI) | chr4... 149 2e-036
TAIR9_protein||AT2G20700.1 | Symbols: | unknown protein | chr2:... 134 4e-032
TAIR9_protein||AT4G28280.1 | Symbols: | unknown protein | chr4:... 128 4e-030
>TAIR9_protein||AT5G56170.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored
to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: LRE
(LORELEI) (TAIR:AT4G26466.1); Has 71 Blast hits to 71 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:22736072-22737108 FORWARD
Length = 169
Score = 200 bits (508), Expect = 6e-052
Identities = 97/131 (74%), Positives = 110/131 (83%), Gaps = 7/131 (5%)
Frame = +3
Query: 21 LNFLSSSLFLFLLLSVF-----SSFISDSAFIKSETLANGRNLLQKKKACPVNFEFMNYT 185
+ LS +LF FLLLSV SSFISD F +S++L GRNLLQ KK CPVNFEFMNYT
Sbjct: 1 MELLSRALFFFLLLSVLSSFSSSSFISDGVF-ESQSLVLGRNLLQTKKTCPVNFEFMNYT 59
Query: 186 IITSQCKGPKYPPKKCCTAFKEFACPYADELNDLSNDCATTMFSYINLYGKYPPGLFANR 365
IITS+CKGPKYPPK+CC AFK+FACPY D+LNDLS+DCATTMFSYINLYGKYPPGLFAN+
Sbjct: 60 IITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQ 119
Query: 366 C-QGKGGLKCP 395
C +GK GL+CP
Sbjct: 120 CKEGKEGLECP 130
>TAIR9_protein||AT4G26466.1 | Symbols: LRE | LRE (LORELEI) |
chr4:13367645-13368629 REVERSE
Length = 166
Score = 149 bits (375), Expect = 2e-036
Identities = 69/123 (56%), Positives = 90/123 (73%), Gaps = 6/123 (4%)
Frame = +3
Query: 42 LFLFLLLSVF----SSFISDSAFIKSETLANGRNLLQKKKACPVNFEFMNYTIITSQCKG 209
LF FL+ + SS ISD F +S+T +GRNL KK C VNFE+M+Y ++T +CKG
Sbjct: 6 LFFFLMALLVSLSSSSSISDGVF-ESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKG 64
Query: 210 PKYPPKKCCTAFKEFACPYADELNDLSNDCATTMFSYINLYGKYPPGLFANRC-QGKGGL 386
P +P K+CC+AFKEFACPY ++ND+++DCA TMFSY+N+YG YP GLFAN C + K GL
Sbjct: 65 PAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDGL 124
Query: 387 KCP 395
CP
Sbjct: 125 VCP 127
>TAIR9_protein||AT2G20700.1 | Symbols: | unknown protein | chr2:8925003-8925714
REVERSE
Length = 164
Score = 134 bits (337), Expect = 4e-032
Identities = 69/119 (57%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Frame = +3
Query: 39 SLFLFLLLSVFSSFISDSAFIKSETLANGRNLLQKKKACPVNFEFMNYTIITSQCKGPKY 218
SL LLS FS +S F A R LLQ + C +F NYTIITS+CKGP Y
Sbjct: 10 SLLPIFLLSGFS--LSYDEF--DGHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNY 65
Query: 219 PPKKCCTAFKEFACPYADELNDLSNDCATTMFSYINLYGKYPPGLFANRC-QGKGGLKC 392
P CC+AFK+FACP+A+ LND NDCA+TMFSYINLYG+YPPG+FAN C +GK GL C
Sbjct: 66 PANVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDC 124
>TAIR9_protein||AT4G28280.1 | Symbols: | unknown protein |
chr4:14011083-14011487 FORWARD
Length = 135
Score = 128 bits (320), Expect = 4e-030
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +3
Query: 150 ACPVNFEFMNYTIITSQCKGPKYPPKKCCTAFKEFACPYADELNDLSNDCATTMFSYINL 329
AC +F NYTIITS+CKGP YP K CC+AFK+FACP+A+ LND DCA+TMFSYINL
Sbjct: 21 ACKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINL 80
Query: 330 YGKYPPGLFANRC-QGKGGLKC 392
YG+YPPG+FAN C +GK GL C
Sbjct: 81 YGRYPPGIFANMCKEGKEGLDC 102
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,873,605,336
Number of Sequences: 33410
Number of Extensions: 11873605336
Number of Successful Extensions: 381279635
Number of sequences better than 0.0: 0
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