BLASTX 7.6.2
Query= UN22888 /QuerySize=1709
(1708 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G39730.1 | Symbols: RCA | RCA (RUBISCO ACTIVAS... 824 6e-239
TAIR9_protein||AT2G39730.2 | Symbols: RCA | RCA (RUBISCO ACTIVAS... 822 2e-238
TAIR9_protein||AT2G39730.3 | Symbols: RCA | RCA (RUBISCO ACTIVAS... 822 2e-238
TAIR9_protein||AT1G73110.1 | Symbols: | ribulose bisphosphate c... 314 1e-085
>TAIR9_protein||AT2G39730.1 | Symbols: RCA | RCA (RUBISCO ACTIVASE); ADP binding
/ ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate
carboxylase/oxygenase activator | chr2:16570951-16573345 REVERSE
Length = 475
Score = 824 bits (2126), Expect = 6e-239
Identities = 408/453 (90%), Positives = 427/453 (94%), Gaps = 1/453 (0%)
Frame = +2
Query: 83 MATAVSTVGAINRTPLSLNGSGAGAASVPSTTFLGKKVVTASRFTQSNNKKSNGSFKVVA 262
MA AVSTVGAINR PLSLNGSG+GA S P++TFLGKKVVT SRF QS NKKSNGSFKV+A
Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQS-NKKSNGSFKVLA 59
Query: 263 VKEDKQTDGDRWRGLAYDVSDDQQDITRGKGMVDSVFQAPMGTGTHNAVLSSYEYISQGL 442
VKEDKQTDGDRWRGLAYD SDDQQDITRGKGMVDSVFQAPMGTGTH+AVLSSYEY+SQGL
Sbjct: 60 VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGL 119
Query: 443 KQYNLDNMMDGLYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM 622
+QYNLDNMMDG YIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM
Sbjct: 120 RQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM 179
Query: 623 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 802
AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG
Sbjct: 180 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 239
Query: 803 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGR 982
TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII TGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGR 299
Query: 983 MEKFYWAPTREDRIGVCKGIFRTDNVPDEDVVTLVDKFPGQSIDFFGALRARVYDDEVRK 1162
MEKFYWAPTREDRIGVCKGIFRTD + DED+VTLVD+FPGQSIDFFGALRARVYDDEVRK
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRK 359
Query: 1163 FVEGLGVEKISKRLVNSREAPPVFEQPKMTLEKLMEYGNMLVMEQENVKRVQLADQYLNE 1342
FVE LGVEKI KRLVNSRE PPVFEQP+MT EKLMEYGNMLVMEQENVKRVQLA+ YL++
Sbjct: 360 FVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQ 419
Query: 1343 AALGDANADAIGRGTFYG*NSRESSTASERSCS 1441
AALGDANADAIGRGTFYG +++ + C+
Sbjct: 420 AALGDANADAIGRGTFYGKGAQQVNLPVPEGCT 452
Score = 79 bits (192), Expect = 1e-014
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 1407 GKAAQQVNVPVPEGCTDPQAENFDPTARSDDGTCVYKF* 1523
GK AQQVN+PVPEGCTDP AENFDPTARSDDGTCVY F*
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF* 475
>TAIR9_protein||AT2G39730.2 | Symbols: RCA | RCA (RUBISCO ACTIVASE); ADP binding
/ ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate
carboxylase/oxygenase activator | chr2:16571046-16573345 REVERSE
Length = 447
Score = 822 bits (2122), Expect = 2e-238
Identities = 407/438 (92%), Positives = 421/438 (96%), Gaps = 1/438 (0%)
Frame = +2
Query: 83 MATAVSTVGAINRTPLSLNGSGAGAASVPSTTFLGKKVVTASRFTQSNNKKSNGSFKVVA 262
MA AVSTVGAINR PLSLNGSG+GA S P++TFLGKKVVT SRF QS NKKSNGSFKV+A
Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQS-NKKSNGSFKVLA 59
Query: 263 VKEDKQTDGDRWRGLAYDVSDDQQDITRGKGMVDSVFQAPMGTGTHNAVLSSYEYISQGL 442
VKEDKQTDGDRWRGLAYD SDDQQDITRGKGMVDSVFQAPMGTGTH+AVLSSYEY+SQGL
Sbjct: 60 VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGL 119
Query: 443 KQYNLDNMMDGLYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM 622
+QYNLDNMMDG YIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM
Sbjct: 120 RQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM 179
Query: 623 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 802
AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG
Sbjct: 180 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 239
Query: 803 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGR 982
TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII TGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGR 299
Query: 983 MEKFYWAPTREDRIGVCKGIFRTDNVPDEDVVTLVDKFPGQSIDFFGALRARVYDDEVRK 1162
MEKFYWAPTREDRIGVCKGIFRTD + DED+VTLVD+FPGQSIDFFGALRARVYDDEVRK
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRK 359
Query: 1163 FVEGLGVEKISKRLVNSREAPPVFEQPKMTLEKLMEYGNMLVMEQENVKRVQLADQYLNE 1342
FVE LGVEKI KRLVNSRE PPVFEQP+MT EKLMEYGNMLVMEQENVKRVQLA+ YL++
Sbjct: 360 FVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQ 419
Query: 1343 AALGDANADAIGRGTFYG 1396
AALGDANADAIGRGTFYG
Sbjct: 420 AALGDANADAIGRGTFYG 437
>TAIR9_protein||AT2G39730.3 | Symbols: RCA | RCA (RUBISCO ACTIVASE); ADP binding
/ ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate
carboxylase/oxygenase activator | chr2:16571174-16573345 REVERSE
Length = 442
Score = 822 bits (2122), Expect = 2e-238
Identities = 407/438 (92%), Positives = 421/438 (96%), Gaps = 1/438 (0%)
Frame = +2
Query: 83 MATAVSTVGAINRTPLSLNGSGAGAASVPSTTFLGKKVVTASRFTQSNNKKSNGSFKVVA 262
MA AVSTVGAINR PLSLNGSG+GA S P++TFLGKKVVT SRF QS NKKSNGSFKV+A
Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQS-NKKSNGSFKVLA 59
Query: 263 VKEDKQTDGDRWRGLAYDVSDDQQDITRGKGMVDSVFQAPMGTGTHNAVLSSYEYISQGL 442
VKEDKQTDGDRWRGLAYD SDDQQDITRGKGMVDSVFQAPMGTGTH+AVLSSYEY+SQGL
Sbjct: 60 VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGL 119
Query: 443 KQYNLDNMMDGLYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM 622
+QYNLDNMMDG YIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM
Sbjct: 120 RQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVM 179
Query: 623 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 802
AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG
Sbjct: 180 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGG 239
Query: 803 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGR 982
TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII TGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGR 299
Query: 983 MEKFYWAPTREDRIGVCKGIFRTDNVPDEDVVTLVDKFPGQSIDFFGALRARVYDDEVRK 1162
MEKFYWAPTREDRIGVCKGIFRTD + DED+VTLVD+FPGQSIDFFGALRARVYDDEVRK
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRK 359
Query: 1163 FVEGLGVEKISKRLVNSREAPPVFEQPKMTLEKLMEYGNMLVMEQENVKRVQLADQYLNE 1342
FVE LGVEKI KRLVNSRE PPVFEQP+MT EKLMEYGNMLVMEQENVKRVQLA+ YL++
Sbjct: 360 FVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQ 419
Query: 1343 AALGDANADAIGRGTFYG 1396
AALGDANADAIGRGTFYG
Sbjct: 420 AALGDANADAIGRGTFYG 437
>TAIR9_protein||AT1G73110.1 | Symbols: | ribulose bisphosphate
carboxylase/oxygenase activase, putative / RuBisCO activase, putative |
chr1:27494344-27496844 REVERSE
Length = 433
Score = 314 bits (803), Expect = 1e-085
Identities = 165/334 (49%), Positives = 231/334 (69%), Gaps = 12/334 (3%)
Frame = +2
Query: 353 GMVDSVFQAPMGTGTHNAVLSSYEYISQGLKQYNLDNMMDGLYIAPAFMDKLVVHITKNF 532
GM+D VF G + ++ ++Y + + + +++ YIAP+F+DK+ VHI KN+
Sbjct: 100 GMIDDVFIGDF-LGKDSDIV--FDYRQKATRSF--EHLQGDYYIAPSFLDKVAVHIVKNY 154
Query: 533 LTLP-NIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQ 709
L NIK+PLILGIWGGKGQGK+FQ EL+ MG+ P++MSAGELES AGEP +LIR
Sbjct: 155 LAPSLNIKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRD 214
Query: 710 RYREAADLIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 886
RYR A+ +I+ +GKM L IND+DAG GR G TQ TVNNQ+V TLMN+ADNPT V +
Sbjct: 215 RYRTASQVIQNQGKMSVLMINDIDAGLGRF-GETQMTVNNQIVVGTLMNLADNPTRVSVG 273
Query: 887 GMYNKEENA-RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP 1063
+ + + RVP+IVTGNDFSTLYAPLIR+GRMEKFYW PTRED + + ++ D +
Sbjct: 274 QEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIVNIVSRMYEKDGIS 333
Query: 1064 DEDVVTLVDKFPGQSIDFFGALRARVYDDEVRKFV-EGLGVEKISKRLVNSREAP--PVF 1234
+DV+++VDKFP Q++DF+GALR+R YD + K+V E G+E + K L+ ++ P F
Sbjct: 334 RKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQF 393
Query: 1235 EQPKMTLEKLMEYGNMLVMEQENVKRVQLADQYL 1336
P+ T+E L+E G L+ EQ+ + +L+ +Y+
Sbjct: 394 TAPEQTVEALLESGYSLINEQKLIMETKLSKEYM 427
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,873,605,336
Number of Sequences: 33410
Number of Extensions: 11873605336
Number of Successful Extensions: 381279635
Number of sequences better than 0.0: 0
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