BLASTX 7.6.2
Query= UN22911 /QuerySize=820
(819 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S... 341 4e-094
TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S... 331 3e-091
TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S... 294 6e-080
TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S... 213 1e-055
TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S... 211 4e-055
>TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 178
Score = 341 bits (873), Expect = 4e-094
Identities = 164/182 (90%), Positives = 168/182 (92%), Gaps = 4/182 (2%)
Frame = -2
Query: 743 MIISETNRREICKYLFKEGVLFAKKDFNLAKHPLIESVPNLQVIKLMQSFKSKEYVRETF 564
MIISE NRREICKYLFKEGV FAKKDFNL KHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 563 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPPRFEGD 384
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RGPPR +GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGD 119
Query: 383 RPRYGDRDGYRAGPRGGDVGGEKGGAPADYQPSFQGSGGRPGFGRGAGGYSAAAPSGSGL 204
RPR+GDRDGYR GPRGGD EKGGAPAD+QPSFQG GGRPGFGRGAGGYSAAAPSGSG
Sbjct: 120 RPRFGDRDGYRGGPRGGD---EKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSGF 176
Query: 203 P* 198
P*
Sbjct: 177 P* 178
>TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S10 (RPS10C) |
chr5:21355781-21357003 REVERSE
Length = 180
Score = 331 bits (848), Expect = 3e-091
Identities = 164/183 (89%), Positives = 168/183 (91%), Gaps = 4/183 (2%)
Frame = -2
Query: 743 MIISETNRREICKYLFKEGVLFAKKDFNLAKHPLIESVPNLQVIKLMQSFKSKEYVRETF 564
MIISE NR+EICKYLFKEGV FAKKDFNLAKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 563 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPPRFEGD 384
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RGP GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGD 119
Query: 383 RPRYGDRDGYRAGPR-GGDVGGEKGGAPADYQPSFQGSGGRPGFGRGAGGYSAAAPSGSG 207
RPR+GDRDGYRAGPR GG+ GGEKGGAPADYQPSFQGSG GFGRGAGGYSAAAPSGSG
Sbjct: 120 RPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGSG 177
Query: 206 LP* 198
LP*
Sbjct: 178 LP* 180
>TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610583 REVERSE
Length = 181
Score = 294 bits (751), Expect = 6e-080
Identities = 145/184 (78%), Positives = 158/184 (85%), Gaps = 5/184 (2%)
Frame = -2
Query: 743 MIISETNRREICKYLFKEGVLFAKKDFNLAKHPLIESVPNLQVIKLMQSFKSKEYVRETF 564
MIISETNRREI KYLFKEGVLFAKKDFNL +HPLIESVPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 563 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPPRFEGD 384
AWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG GDRPRGPPR +G+
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGDGE 119
Query: 383 RPRYGDRDGYRAGPRGGDVGGEKGGAPADYQPSFQG--SGGRPGFGRGAGGYSAAAPSGS 210
R R+GDRDGYR GP+ G G+K GAPADYQP F+G G R GFGRGAGG+ A +GS
Sbjct: 120 R-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-AGS 177
Query: 209 GLP* 198
LP*
Sbjct: 178 DLP* 181
>TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 150
Score = 213 bits (542), Expect = 1e-055
Identities = 112/150 (74%), Positives = 117/150 (78%), Gaps = 8/150 (5%)
Frame = -2
Query: 743 MIISETNRREICKYLFKEGVLFAKKDFNLAKHPLIESVPNLQVIKLMQSFKSKEYVRETF 564
MIISE NRREICKYLFKEGV FAKKDFNL KHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 563 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG--PPRFE 390
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGP G +G P F+
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRGGDEKGGAPADFQ 119
Query: 389 GDRPRYGDRDGYRAGPRGGDVGGEKGGAPA 300
G R G+ G GG AP+
Sbjct: 120 PSFQGGGGRPGF-----GRGAGGYSAAAPS 144
Score = 92 bits (228), Expect = 3e-019
Identities = 43/50 (86%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
Frame = -2
Query: 347 GPRGGDVGGEKGGAPADYQPSFQGSGGRPGFGRGAGGYSAAAPSGSGLP* 198
GPRGGD EKGGAPAD+QPSFQG GGRPGFGRGAGGYSAAAPSGSG P*
Sbjct: 104 GPRGGD---EKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSGFP* 150
>TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610203 REVERSE
Length = 135
Score = 211 bits (537), Expect = 4e-055
Identities = 102/138 (73%), Positives = 114/138 (82%), Gaps = 5/138 (3%)
Frame = -2
Query: 605 MQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGP 426
MQSFKSKEYVRETFAWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG
Sbjct: 1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 59
Query: 425 PGDRPRGPPRFEGDRPRYGDRDGYRAGPRGGDVGGEKGGAPADYQPSFQG--SGGRPGFG 252
GDRPRGPPR +G+R R+GDRDGYR GP+ G G+K GAPADYQP F+G G R GFG
Sbjct: 60 GGDRPRGPPRGDGER-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFG 118
Query: 251 RGAGGYSAAAPSGSGLP* 198
RGAGG+ A +GS LP*
Sbjct: 119 RGAGGFGGGA-AGSDLP* 135
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,873,605,336
Number of Sequences: 33410
Number of Extensions: 11873605336
Number of Successful Extensions: 381279635
Number of sequences better than 0.0: 0
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