BLASTX 7.6.2
Query= UN22913 /QuerySize=1018
(1017 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15219418|ref|NP_175092.1| photosystem II 22 kDa protein [Arab... 495 5e-138
gi|15294226|gb|AAK95290.1|AF410304_1 unknown protein [Arabidopsi... 493 2e-137
gi|297846822|ref|XP_002891292.1| hypothetical protein ARALYDRAFT... 492 5e-137
gi|312281657|dbj|BAJ33694.1| unnamed protein product [Thellungie... 491 9e-137
gi|133902304|gb|ABO41835.1| putative photosystem II protein [Gos... 391 2e-106
gi|133902325|gb|ABO41853.1| putative photosystem II protein [Gos... 391 2e-106
gi|225459564|ref|XP_002285857.1| PREDICTED: hypothetical protein... 389 5e-106
gi|255545402|ref|XP_002513761.1| Photosystem II 22 kDa protein, ... 387 2e-105
gi|188509922|gb|ACD56611.1| putative photosystem II protein [Gos... 382 8e-104
gi|224063082|ref|XP_002300987.1| hypothetical protein POPTRDRAFT... 380 2e-103
gi|340002457|gb|AEK26371.1| chloroplast photosystem II subunit [... 371 2e-100
gi|400890|sp|Q02060.1|PSBS_SPIOL RecName: Full=Photosystem II 22... 368 9e-100
gi|1709846|sp|P54773.1|PSBS_SOLLC RecName: Full=Photosystem II 2... 363 4e-098
gi|295824589|gb|ABF72923.2| chloroplast chlorophyll a/b-binding ... 362 8e-098
gi|326494250|dbj|BAJ90394.1| predicted protein [Hordeum vulgare ... 356 3e-096
gi|115441299|ref|NP_001044929.1| Os01g0869800 [Oryza sativa Japo... 356 6e-096
gi|38345525|emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japon... 355 8e-096
gi|242055117|ref|XP_002456704.1| hypothetical protein SORBIDRAFT... 355 1e-095
gi|255764547|gb|ACU33835.1| PsbS protein [Phyllostachys edulis] 351 1e-094
gi|226504130|ref|NP_001150026.1| photosystem II 22 kDa protein [... 351 2e-094
>gi|15219418|ref|NP_175092.1| photosystem II 22 kDa protein [Arabidopsis
thaliana]
Length = 265
Score = 495 bits (1274), Expect = 5e-138
Identities = 252/265 (95%), Positives = 256/265 (96%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKA 767
MAQTMLLTSG++A HFLRNK+PLAQPKVHHLFLSGNSPV LPSRR S PLA+FKPKTKA
Sbjct: 1 MAQTMLLTSGVTAGHFLRNKSPLAQPKVHHLFLSGNSPVALPSRRQSFVPLALFKPKTKA 60
Query: 766 APKKVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLN 587
APKKVEK K KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEALTGKGILAQLN
Sbjct: 61 APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLN 120
Query: 586 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGL 407
LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGK VRSALGL
Sbjct: 121 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKNVRSALGL 180
Query: 406 KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL 227
KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL
Sbjct: 181 KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL 240
Query: 226 NVAFFFFAAINPGNGKFITDDGEES 152
NVAFFFFAAINPGNGKFITDDGEES
Sbjct: 241 NVAFFFFAAINPGNGKFITDDGEES 265
>gi|15294226|gb|AAK95290.1|AF410304_1 unknown protein [Arabidopsis thaliana]
Length = 265
Score = 493 bits (1269), Expect = 2e-137
Identities = 251/265 (94%), Positives = 255/265 (96%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKA 767
MAQT LLTSG++A HFLRNK+PLAQPKVHHLFLSGNSPV LPSRR S PLA+FKPKTKA
Sbjct: 1 MAQTFLLTSGVTAGHFLRNKSPLAQPKVHHLFLSGNSPVALPSRRQSFVPLALFKPKTKA 60
Query: 766 APKKVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLN 587
APKKVEK K KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEALTGKGILAQLN
Sbjct: 61 APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLN 120
Query: 586 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGL 407
LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGK VRSALGL
Sbjct: 121 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKNVRSALGL 180
Query: 406 KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL 227
KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL
Sbjct: 181 KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL 240
Query: 226 NVAFFFFAAINPGNGKFITDDGEES 152
NVAFFFFAAINPGNGKFITDDGEES
Sbjct: 241 NVAFFFFAAINPGNGKFITDDGEES 265
>gi|297846822|ref|XP_002891292.1| hypothetical protein ARALYDRAFT_891398
[Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 492 bits (1265), Expect = 5e-137
Identities = 251/265 (94%), Positives = 255/265 (96%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKA 767
MAQTMLLTSG+SA FLRNK+PLAQPKVHHLFLSGNSPV LPSRR S PLA+FKPKTKA
Sbjct: 1 MAQTMLLTSGVSAGQFLRNKSPLAQPKVHHLFLSGNSPVVLPSRRQSFVPLALFKPKTKA 60
Query: 766 APKKVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLN 587
APKKVEK K KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEALTGKGILAQLN
Sbjct: 61 APKKVEKPKKKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLN 120
Query: 586 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGL 407
LETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDDPPTGLEKAVIPPGK VRSALGL
Sbjct: 121 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGQFVDDPPTGLEKAVIPPGKNVRSALGL 180
Query: 406 KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL 227
KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL
Sbjct: 181 KEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLL 240
Query: 226 NVAFFFFAAINPGNGKFITDDGEES 152
NVAFFFFAAINPGNGKFITDDGEES
Sbjct: 241 NVAFFFFAAINPGNGKFITDDGEES 265
>gi|312281657|dbj|BAJ33694.1| unnamed protein product [Thellungiella halophila]
Length = 267
Score = 491 bits (1263), Expect = 9e-137
Identities = 251/266 (94%), Positives = 257/266 (96%), Gaps = 2/266 (0%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKA 767
MAQTM+LTSG+SAN FLRNKNPLAQPKVHHLFLSGNSPV +PSRR SL PLA+FKPKTKA
Sbjct: 1 MAQTMMLTSGVSANQFLRNKNPLAQPKVHHLFLSGNSPVVIPSRRQSLVPLALFKPKTKA 60
Query: 766 APKKVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLN 587
APKKVEKVKPKVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEA+TGKGILAQLN
Sbjct: 61 APKKVEKVKPKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEAVTGKGILAQLN 120
Query: 586 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKGVRSAL 413
LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP PTGLEKAVI PGK VRSAL
Sbjct: 121 LETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTPTGLEKAVIAPGKNVRSAL 180
Query: 412 GLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLV 233
GLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLV
Sbjct: 181 GLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLV 240
Query: 232 LLNVAFFFFAAINPGNGKFITDDGEE 155
LLNVAFFFFAAINPGNGKFITDDGE+
Sbjct: 241 LLNVAFFFFAAINPGNGKFITDDGED 266
>gi|133902304|gb|ABO41835.1| putative photosystem II protein [Gossypium
raimondii]
Length = 278
Score = 391 bits (1002), Expect = 2e-106
Identities = 202/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = -3
Query: 874 QPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKAAPKK-VEKVKPKVEDGIFGTSGGI 698
+P H LF ++ V S + + A+FKPKTKAAPKK K KPKVEDGIFGTSGGI
Sbjct: 38 KPSSHFLFNPHSNTVAASSSK-AFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGI 96
Query: 697 GFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 518
GFTKQNELFVGRVAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLL
Sbjct: 97 GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 156
Query: 517 GAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQL 338
GAIGALGDRGKFVD+PPTG+E AVIPPGKG+R ALGLKE GPLFGFTKANELFVGRLAQL
Sbjct: 157 GAIGALGDRGKFVDEPPTGIEGAVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQL 216
Query: 337 GIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGE 158
GIAFSLIGEIITGKGALAQLNIETGIPI DIEPLVL NVAFFFFAAINPG GKF+TD+ E
Sbjct: 217 GIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTDEAE 276
Query: 157 E 155
E
Sbjct: 277 E 277
>gi|133902325|gb|ABO41853.1| putative photosystem II protein [Gossypium
hirsutum]
Length = 278
Score = 391 bits (1002), Expect = 2e-106
Identities = 202/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = -3
Query: 874 QPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKAAPKK-VEKVKPKVEDGIFGTSGGI 698
+P H LF ++ V S + + A+FKPKTKAAPKK K KPKVEDGIFGTSGGI
Sbjct: 38 KPSSHFLFNPHSNTVAASSSK-AFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGI 96
Query: 697 GFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 518
GFTKQNELFVGRVAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLL
Sbjct: 97 GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 156
Query: 517 GAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQL 338
GAIGALGDRGKFVD+PPTG+E AVIPPGKG+R ALGLKE GPLFGFTKANELFVGRLAQL
Sbjct: 157 GAIGALGDRGKFVDEPPTGIEGAVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQL 216
Query: 337 GIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGE 158
GIAFSLIGEIITGKGALAQLNIETGIPI DIEPLVL NVAFFFFAAINPG GKF+TD+ E
Sbjct: 217 GIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTDEAE 276
Query: 157 E 155
E
Sbjct: 277 E 277
>gi|225459564|ref|XP_002285857.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 270
Score = 389 bits (998), Expect = 5e-106
Identities = 206/270 (76%), Positives = 228/270 (84%), Gaps = 6/270 (2%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFL-RNKNPLAQ---PKVHHLFLSGNSPVTLPSRRPSLAPLAIFKP 779
MAQTML+T +S + L + PL Q PK L P + + P+ LA+FK
Sbjct: 1 MAQTMLITPSVSGHSVLDLKRQPLLQRLRPKPFSHLLLPPLPTSSSTSSPAFTTLALFKS 60
Query: 778 KTKAAP-KKVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGI 602
KTKAAP KKV K KP+VEDGIFGTSGGIGFTK+NELFVGRVAM+GFAASLLGEA+TGKGI
Sbjct: 61 KTKAAPSKKVTKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASLLGEAITGKGI 120
Query: 601 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFV-DDPPTGLEKAVIPPGKGV 425
LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FV DDPPTG+E AVIPPGKG+
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDPPTGIEGAVIPPGKGL 180
Query: 424 RSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDI 245
RSALGL+E GPLFGFTK+NELFVGRLAQLGI FS+IGEIITGKGALAQLNIETG+PI DI
Sbjct: 181 RSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQLNIETGVPISDI 240
Query: 244 EPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
EPLVL NV FFFFAA+NPG+GKF+TDD EE
Sbjct: 241 EPLVLFNVIFFFFAALNPGSGKFVTDDEEE 270
>gi|255545402|ref|XP_002513761.1| Photosystem II 22 kDa protein, chloroplast
precursor, putative [Ricinus communis]
Length = 275
Score = 387 bits (993), Expect = 2e-105
Identities = 208/275 (75%), Positives = 227/275 (82%), Gaps = 11/275 (4%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFL-RNKNPLAQPKVHHLFLSGNSPV---TLPSRRPSLAP------ 797
MAQTML SG+S H + ++PL Q +V L S + LP+ S AP
Sbjct: 1 MAQTMLFMSGVSTRHVVDLKRDPLLQFQVDRLRPKPFSSLLFSPLPTNSSSFAPSKTFTT 60
Query: 796 LAIFKPKTKAAPKK-VEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 620
A+FK K KAAPKK V K K KVEDG+FGTSGGIGFTKQNELFVGRVAM+GFAASLLGE
Sbjct: 61 FALFKSKAKAAPKKTVVKPKQKVEDGVFGTSGGIGFTKQNELFVGRVAMLGFAASLLGEG 120
Query: 619 LTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIP 440
LTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTG+E AVIP
Sbjct: 121 LTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGIEGAVIP 180
Query: 439 PGKGVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGI 260
PGKG R+ALGLKE GPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGI
Sbjct: 181 PGKGFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGI 240
Query: 259 PIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
P+ +IEPLVL NV FFFFAA+NPG GKF+TD+ +E
Sbjct: 241 PVNEIEPLVLFNVIFFFFAALNPGTGKFVTDEEDE 275
>gi|188509922|gb|ACD56611.1| putative photosystem II protein [Gossypioides
kirkii]
Length = 277
Score = 382 bits (979), Expect = 8e-104
Identities = 200/241 (82%), Positives = 213/241 (88%), Gaps = 2/241 (0%)
Frame = -3
Query: 874 QPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKAAPKKVE-KVKPKVEDGIFGTSGGI 698
+P H LF ++ V S + + A+FK KTKAAPKK E K KPKVEDGIFGTSGGI
Sbjct: 38 KPFSHFLFNPLSNAVAASSSK-AFTTFALFKSKTKAAPKKAEPKPKPKVEDGIFGTSGGI 96
Query: 697 GFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 518
GFTKQNELFVGRVAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLL
Sbjct: 97 GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 156
Query: 517 GAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQL 338
GAIGALGDRG+FVD+PPTG+E AVIPPGKGVR ALGLKE GPLFGFTKANELFVGRLAQL
Sbjct: 157 GAIGALGDRGRFVDEPPTGVEGAVIPPGKGVRGALGLKEGGPLFGFTKANELFVGRLAQL 216
Query: 337 GIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGE 158
GIAFSLIGEIITGKGALAQLNIETGIPI DIEPLVL NVAFFF AAINPG GKF+TD+ E
Sbjct: 217 GIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFAAAINPGTGKFVTDEEE 276
Query: 157 E 155
+
Sbjct: 277 D 277
>gi|224063082|ref|XP_002300987.1| hypothetical protein POPTRDRAFT_816277
[Populus trichocarpa]
Length = 272
Score = 380 bits (975), Expect = 2e-103
Identities = 204/272 (75%), Positives = 226/272 (83%), Gaps = 8/272 (2%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFL-RNKNPLAQPKVHHLFLSGNSPV---TLPSRRPS---LAPLAI 788
MAQTM+L SG+S + ++PL Q +V L + S + LPS+ S LA+
Sbjct: 1 MAQTMVLMSGVSTRQVVDLKRDPLLQFQVQRLRPAPFSRLLYNPLPSKASSSNAFTTLAL 60
Query: 787 FKPKTKAAPKK-VEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTG 611
FKP+TKA PKK KPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA+TG
Sbjct: 61 FKPRTKAVPKKAAPPPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITG 120
Query: 610 KGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGK 431
KGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDDP TG+E AVIPPGK
Sbjct: 121 KGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDPTTGIEGAVIPPGK 180
Query: 430 GVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQ 251
R+ALGLKE GPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIP+
Sbjct: 181 SFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPVN 240
Query: 250 DIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
+IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 241 EIEPLVLFNVLFFFIAALNPGTGKFVTDEDEE 272
>gi|340002457|gb|AEK26371.1| chloroplast photosystem II subunit [Sedum
alfredii]
Length = 273
Score = 371 bits (950), Expect = 2e-100
Identities = 193/248 (77%), Positives = 209/248 (84%), Gaps = 9/248 (3%)
Frame = -3
Query: 892 NKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKAAPKKVEKVKP--KVEDGI 719
N NP Q + H +SP+ L +A+FK K KA KK K KP KVEDG+
Sbjct: 33 NNNPFLQTPLLH--SKASSPLGL-----GFTTVALFKAKAKAPAKKETKSKPKLKVEDGV 85
Query: 718 FGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLF 539
FGTSGGIGFTKQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLF
Sbjct: 86 FGTSGGIGFTKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPLLLF 145
Query: 538 FILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELF 359
FILFTLLGAIGALGDRG+FVDDPPTGLEKAVIPPGKG+RSA GL E GPLFGFTK+NELF
Sbjct: 146 FILFTLLGAIGALGDRGRFVDDPPTGLEKAVIPPGKGLRSAFGLSEGGPLFGFTKSNELF 205
Query: 358 VGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGK 179
VGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVL NV FFFFAA+NPG GK
Sbjct: 206 VGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVIFFFFAALNPGTGK 265
Query: 178 FITDDGEE 155
F+TDD E+
Sbjct: 266 FVTDDEED 273
>gi|400890|sp|Q02060.1|PSBS_SPIOL RecName: Full=Photosystem II 22 kDa protein,
chloroplastic; AltName: Full=CP22; Flags: Precursor
Length = 274
Score = 368 bits (944), Expect = 9e-100
Identities = 198/259 (76%), Positives = 215/259 (83%), Gaps = 4/259 (1%)
Frame = -3
Query: 925 TSGISANHFLRNKNPLAQPK--VHHLFLSGNSPVTLPSRRPSLAPLAIFKPKTKAAPKKV 752
T + N L+ + +PK +LF S P + S LA+FK K K APKKV
Sbjct: 17 TIDLKRNALLKLQIQKIKPKSSTSNLFFS-PLPSSSSSSSTVFKTLALFKSKAK-APKKV 74
Query: 751 EKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGI 572
EK K KVEDG+FGTSGGIGFTK+NELFVGRVAMIGFAASLLGE +TGKGIL+QLNLETGI
Sbjct: 75 EKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGI 134
Query: 571 PIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRSALGLKEQGP 392
PIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+P TGLEKAVIPPGK VRSALGLK +GP
Sbjct: 135 PIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPTTGLEKAVIPPGKDVRSALGLKTKGP 194
Query: 391 LFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFF 212
LFGFTK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FF
Sbjct: 195 LFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFF 254
Query: 211 FFAAINPGNGKFITDDGEE 155
F AAINPG GKFITDD EE
Sbjct: 255 FIAAINPGTGKFITDDEEE 273
>gi|1709846|sp|P54773.1|PSBS_SOLLC RecName: Full=Photosystem II 22 kDa protein,
chloroplastic; AltName: Full=CP22; Flags: Precursor
Length = 276
Score = 363 bits (930), Expect = 4e-098
Identities = 189/233 (81%), Positives = 203/233 (87%), Gaps = 4/233 (1%)
Frame = -3
Query: 841 NSPVTLPSRRPSLAPLAIFKPKTKAAPKKV--EKVKPKVEDGIFGTSGGIGFTKQNELFV 668
+S S + + +A+FK K KA PKKV K K KVEDGIFGTSGGIGFTKQNELFV
Sbjct: 44 SSSTNASSSKFTSTTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFV 103
Query: 667 GRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG 488
GRVAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG
Sbjct: 104 GRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRG 163
Query: 487 KFVDD--PPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIG 314
KFVDD PPTGLEKAVIPPGK +SALGL E GPLFGFTKANELFVGRLAQLGIAFS+IG
Sbjct: 164 KFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIG 223
Query: 313 EIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
EIITGKGALAQLN ETG+PI +IEPL+L N+AFFFFAAINPG GKFITD+ E+
Sbjct: 224 EIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>gi|295824589|gb|ABF72923.2| chloroplast chlorophyll a/b-binding protein
[Solanum nigrum]
Length = 276
Score = 362 bits (927), Expect = 8e-098
Identities = 188/233 (80%), Positives = 203/233 (87%), Gaps = 4/233 (1%)
Frame = -3
Query: 841 NSPVTLPSRRPSLAPLAIFKPKTKAAPKKV--EKVKPKVEDGIFGTSGGIGFTKQNELFV 668
+S S + + +A+FK K KA PKKV K K KVEDGIFGTSGGIGFTKQNELFV
Sbjct: 44 SSSTNASSSKFTSTTVALFKSKAKAPPKKVAPPKQKEKVEDGIFGTSGGIGFTKQNELFV 103
Query: 667 GRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG 488
GRVAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG
Sbjct: 104 GRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRG 163
Query: 487 KFVDD--PPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIG 314
KFVDD PPTGLEKAVIPPG+ +SALGL E GPLFGFTKANELFVGRLAQLGIAFS+IG
Sbjct: 164 KFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIG 223
Query: 313 EIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
EIITGKGALAQLN ETG+PI +IEPL+L N+AFFFFAAINPG GKFITD+ E+
Sbjct: 224 EIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>gi|326494250|dbj|BAJ90394.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 271
Score = 356 bits (913), Expect = 3e-096
Identities = 194/272 (71%), Positives = 218/272 (80%), Gaps = 9/272 (3%)
Frame = -3
Query: 946 MAQTMLLTSGI----SANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLA--PLAIF 785
MAQ+ML+ SG+ S L+ P + +S PSL+ +A+F
Sbjct: 1 MAQSMLM-SGVNGVASGRSLLQAARPSSASTPFSRLALSSSSAAYYKHMPSLSVRTMALF 59
Query: 784 -KPKTKAAP-KKVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTG 611
K KTKAAP KKV KPK EDGIFGTSGGIGFTK+NELFVGRVAMIGFAAS+LGEA+TG
Sbjct: 60 GKSKTKAAPAKKVVAPKPKTEDGIFGTSGGIGFTKENELFVGRVAMIGFAASILGEAITG 119
Query: 610 KGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGK 431
KGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+ PTGL+KAVI PGK
Sbjct: 120 KGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEQPTGLDKAVIAPGK 179
Query: 430 GVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQ 251
G RSALGL E GPLFGFTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLNIETG+PI
Sbjct: 180 GFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 239
Query: 250 DIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
+IEPLVL NV FFF AAINPG GKFI+ + ++
Sbjct: 240 EIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 271
>gi|115441299|ref|NP_001044929.1| Os01g0869800 [Oryza sativa Japonica Group]
Length = 268
Score = 356 bits (911), Expect = 6e-096
Identities = 195/270 (72%), Positives = 217/270 (80%), Gaps = 8/270 (2%)
Frame = -3
Query: 946 MAQTMLLT--SGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIF-KPK 776
MAQ+ML++ +G A P+ L LS P + R S+ +A+F + K
Sbjct: 1 MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLS--QPSSSLGRAVSVKTVALFGRSK 58
Query: 775 TKAAPKKVEKVKP--KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGI 602
TKAAP + + KP K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+LGEA+TGKGI
Sbjct: 59 TKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGI 118
Query: 601 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPP-TGLEKAVIPPGKGV 425
LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVDD P TGL+KAVI PGKG
Sbjct: 119 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDDQPVTGLDKAVIAPGKGF 178
Query: 424 RSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDI 245
RSALGL E GPLFGFTKANELFVGRLAQLGIAFS+IGEIITGKGALAQLNIETG+PI +I
Sbjct: 179 RSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPINEI 238
Query: 244 EPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
EPLVL NV FFF AAINPG GKF++DD EE
Sbjct: 239 EPLVLFNVVFFFIAAINPGTGKFVSDDDEE 268
>gi|38345525|emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japonica Group]
Length = 248
Score = 355 bits (910), Expect = 8e-096
Identities = 184/228 (80%), Positives = 201/228 (88%), Gaps = 3/228 (1%)
Frame = -3
Query: 832 VTLPSRRPSLAPLAIFKPKTKAAPK--KVEKVKPKVEDGIFGTSGGIGFTKQNELFVGRV 659
V L + L +A FK +TKA+PK K K K VEDGIFGTSGGIGFTK+NELFVGRV
Sbjct: 21 VQLQRMKKHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRV 80
Query: 658 AMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFV 479
AM+GFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FV
Sbjct: 81 AMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFV 140
Query: 478 DDPPTGLEKAVIPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITG 299
DD TGLE+AVIPPGKG R+ALGL E GPLFGFTKANELFVGRLAQLGIAFSLIGEIITG
Sbjct: 141 DD-ATGLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITG 199
Query: 298 KGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
KGALAQLNIETG+PI +IEPL+L N+ FFFFAAINPG GKF+TDD ++
Sbjct: 200 KGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 247
>gi|242055117|ref|XP_002456704.1| hypothetical protein SORBIDRAFT_03g041100
[Sorghum bicolor]
Length = 268
Score = 355 bits (909), Expect = 1e-095
Identities = 189/268 (70%), Positives = 214/268 (79%), Gaps = 4/268 (1%)
Frame = -3
Query: 946 MAQTMLLTSGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIF-KPKTK 770
MAQ+ML+++ ++ L + L L +S S+ S+ LA+F K K K
Sbjct: 1 MAQSMLMSTSVNGGRALPSLQAGRPAPYPRLPLPSSSSGYRHSKSVSVKTLALFGKSKVK 60
Query: 769 AAPKK---VEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKGIL 599
AP K K KPKVEDGIFGTSGGIGFTK+NELFVGRVAM+GFAASLLGEA+TGKGIL
Sbjct: 61 TAPSKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAITGKGIL 120
Query: 598 AQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGVRS 419
AQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+ TGL+KAVI PGKG R
Sbjct: 121 AQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEEVTGLDKAVIQPGKGFRG 180
Query: 418 ALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEP 239
ALGL E GPLFGFTK+NELFVGRLAQLG+AFS+IGEIITGKGALAQLNIETG+PI +IEP
Sbjct: 181 ALGLSEGGPLFGFTKSNELFVGRLAQLGVAFSIIGEIITGKGALAQLNIETGVPINEIEP 240
Query: 238 LVLLNVAFFFFAAINPGNGKFITDDGEE 155
LV+ NV FFF AAINPGNG+FI + EE
Sbjct: 241 LVIFNVLFFFVAAINPGNGRFIIGEDEE 268
>gi|255764547|gb|ACU33835.1| PsbS protein [Phyllostachys edulis]
Length = 269
Score = 351 bits (899), Expect = 1e-094
Identities = 194/277 (70%), Positives = 221/277 (79%), Gaps = 21/277 (7%)
Frame = -3
Query: 946 MAQTMLLT--------SGISANHFLRNKNPLAQPKVHHLFLSGNSPVTLPSRRP-SLAPL 794
MA++ML++ SG S H +R PL++ F+ + P P S+ +
Sbjct: 1 MARSMLMSSVSGVASASGRSLLHAVR-PTPLSR------FVLSSQPSYCKRMAPLSVKTV 53
Query: 793 AIF--KPKTKAAPKKVEKVKP--KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLG 626
A+F K K KAAP + + KP K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+LG
Sbjct: 54 ALFGGKSKAKAAPARKAETKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILG 113
Query: 625 EALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAV 446
EA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVD+ PTGL+KA+
Sbjct: 114 EAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDE-PTGLDKAI 172
Query: 445 IPPGKGVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIET 266
+PPGKG+RSALGL E GPLFGFTKANELFVGRLAQLGIAFS+IGEIITGKGALAQLNIET
Sbjct: 173 VPPGKGLRSALGLGEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIET 232
Query: 265 GIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
G+PI +IEPLVL NV FFF AAINPG GKF+T D EE
Sbjct: 233 GVPISEIEPLVLFNVIFFFVAAINPGTGKFVTTDDEE 269
>gi|226504130|ref|NP_001150026.1| photosystem II 22 kDa protein [Zea mays]
Length = 271
Score = 351 bits (898), Expect = 2e-094
Identities = 189/270 (70%), Positives = 217/270 (80%), Gaps = 8/270 (2%)
Frame = -3
Query: 943 AQTMLLTSGISANH---FLRNKNPLAQPKVHHLFLSGNSPVTLPSRRPSLAPLAIF-KPK 776
AQ+ML+++ ++ L+ P P++ L S +S S+ S+ LA+F K K
Sbjct: 3 AQSMLMSTSVNGGRALPSLQAVRPAPYPRL-PLPSSSSSSGYRHSKSVSVKTLALFGKSK 61
Query: 775 TKAAPKK---VEKVKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEALTGKG 605
K AP K K KPKVEDGIFGTSGGIGFTK+NELFVGRVAM+GFAASLLGEA+TGKG
Sbjct: 62 VKTAPAKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAITGKG 121
Query: 604 ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGLEKAVIPPGKGV 425
ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+ TGL+KAVI PGKG
Sbjct: 122 ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEEVTGLDKAVIQPGKGF 181
Query: 424 RSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDI 245
R ALGL E GPLFGFTK+NELFVGR+AQLG+AFS+IGEIITGKGALAQLNIETG+PI +I
Sbjct: 182 RGALGLSEGGPLFGFTKSNELFVGRMAQLGVAFSIIGEIITGKGALAQLNIETGVPINEI 241
Query: 244 EPLVLLNVAFFFFAAINPGNGKFITDDGEE 155
EPLV+ NV FFF AAINPGNG+FI + EE
Sbjct: 242 EPLVIFNVLFFFIAAINPGNGRFIIGEEEE 271
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,758,012,895,071
Number of Sequences: 15229318
Number of Extensions: 2758012895071
Number of Successful Extensions: 660010853
Number of sequences better than 0.0: 0
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