BLASTX 7.6.2
Query= UN22946 /QuerySize=1085
(1084 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23... 493 8e-140
TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosyst... 418 3e-117
TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSB... 347 9e-096
>TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23 | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2047940-2049186
FORWARD
Length = 264
Score = 493 bits (1269), Expect = 8e-140
Identities = 243/264 (92%), Positives = 256/264 (96%)
Frame = +3
Query: 60 MAYSACFLHQSALASAATRSSSSSSSQRYVSLSKPVQVVCKAQQAHEDDNSAVSRRLALT 239
MAYSACFLHQSALAS+A RSSSSSSSQR+VSLSKPVQ++CKAQQ+HEDDNSAVSRRLALT
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLALT 60
Query: 240 LLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYP 419
LLVGAAAVGSKVSPADAAYGEAANVFGKPK NTDF Y+GDGF+VQVPAKWNPS+E+EYP
Sbjct: 61 LLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYP 120
Query: 420 GQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 599
GQVLR+EDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF
Sbjct: 121 GQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 180
Query: 600 DNNAVATANILETNVQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQA 779
DNNAVATANILE++ Q+VGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQA
Sbjct: 181 DNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQA 240
Query: 780 GDKRWFKGANKFVEKAATSFSVA* 851
GDKRWFKGA KFVE AATSFSVA*
Sbjct: 241 GDKRWFKGARKFVESAATSFSVA* 264
>TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosystem II subunit
P-2); calcium ion binding | chr2:13119047-13120090 REVERSE
Length = 262
Score = 418 bits (1074), Expect = 3e-117
Identities = 210/265 (79%), Positives = 236/265 (89%), Gaps = 4/265 (1%)
Frame = +3
Query: 60 MAYSACFLHQSALASAATRSSSSSSSQ-RYVSLSKPVQVVCKAQQAHEDDNSAVSRRLAL 236
MAYS FLHQSALAS+A RSSSSSSS R+VSLS+PV +VC+AQQ+ E++NSAV RRLAL
Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLAL 60
Query: 237 TLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEY 416
TLLVGAAA+GSKVSPA + PKKNTDF Y+G+GF++Q+P+KWNPS+E+EY
Sbjct: 61 TLLVGAAAIGSKVSPAPPM---VKPLMCLPKKNTDFLPYTGEGFKIQIPSKWNPSKEIEY 117
Query: 417 PGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGG 596
PGQVLR+EDNFDATSN++VM+TPTDKKSITDYGSPE+FLSQVNYLLGKQAY GETASEGG
Sbjct: 118 PGQVLRFEDNFDATSNVSVMITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGG 177
Query: 597 FDNNAVATANILETNVQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 776
FD NAVATANILET+ Q++GGK YYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ
Sbjct: 178 FDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 237
Query: 777 AGDKRWFKGANKFVEKAATSFSVA* 851
AGDKRWFKGA KFVE AATSFSVA*
Sbjct: 238 AGDKRWFKGARKFVENAATSFSVA* 262
>TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2048076-2049186
FORWARD
Length = 220
Score = 347 bits (889), Expect = 9e-096
Identities = 166/181 (91%), Positives = 174/181 (96%)
Frame = +3
Query: 309 NVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPT 488
NVFGKPK NTDF Y+GDGF+VQVPAKWNPS+E+EYPGQVLR+EDNFDATSNLNVMVTPT
Sbjct: 40 NVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPT 99
Query: 489 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILETNVQDVGGKPY 668
DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILE++ Q+VGGKPY
Sbjct: 100 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPY 159
Query: 669 YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 848
YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGA KFVE AATSFSVA
Sbjct: 160 YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 219
Query: 849 * 851
*
Sbjct: 220 * 220
Score = 52 bits (123), Expect = 6e-007
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = +1
Query: 196 MKTITPPSLAVSLSHSSLAPLQLVPKYLPPMLPTVKLQMCLGSQRRTQT 342
MKTITPPS AV LS SS APL LVPKYL M PTVKL + + +T T
Sbjct: 1 MKTITPPSPAVLLSLSSSAPLLLVPKYLLLMPPTVKLVPNVFGKPKTNT 49
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,873,605,336
Number of Sequences: 33410
Number of Extensions: 11873605336
Number of Successful Extensions: 381279635
Number of sequences better than 0.0: 0
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