BLASTX 7.6.2
Query= UN23016 /QuerySize=4077
(4076 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A4QKD7|RPOA_BARVE DNA-directed RNA polymerase subunit alpha O... 650 3e-185
sp|A4QLW5|RPOA_NASOF DNA-directed RNA polymerase subunit alpha O... 650 3e-185
sp|A4QLD8|RPOA_LEPVR DNA-directed RNA polymerase subunit alpha O... 646 5e-184
sp|A4QLM6|RPOA_LOBMA DNA-directed RNA polymerase subunit alpha O... 643 4e-183
sp|A4QKM4|RPOA_CAPBU DNA-directed RNA polymerase subunit alpha O... 642 5e-183
sp|A4QJW3|RPOA_OLIPU DNA-directed RNA polymerase subunit alpha O... 642 5e-183
sp|Q9XQN8|RPOA_SINAL DNA-directed RNA polymerase subunit alpha O... 641 1e-182
sp|A4QL51|RPOA_DRANE DNA-directed RNA polymerase subunit alpha O... 640 3e-182
sp|A4QKW3|RPOA_CRUWA DNA-directed RNA polymerase subunit alpha O... 638 1e-181
sp|A4QK50|RPOA_ARAHI DNA-directed RNA polymerase subunit alpha O... 633 4e-180
sp|A4QJE7|RPOA_AETCO DNA-directed RNA polymerase subunit alpha O... 619 7e-176
sp|A4QJN1|RPOA_AETGR DNA-directed RNA polymerase subunit alpha O... 616 7e-175
sp|Q2L938|RPOA_GOSHI DNA-directed RNA polymerase subunit alpha O... 564 3e-159
sp|Q49KW6|RPOA_EUCGG DNA-directed RNA polymerase subunit alpha O... 553 6e-156
sp|Q0ZIY7|RPOA_VITVI DNA-directed RNA polymerase subunit alpha O... 546 7e-154
sp|A6MM68|RPOA_BUXMI DNA-directed RNA polymerase subunit alpha O... 538 2e-151
sp|Q9MTJ3|RPOA_OENEH DNA-directed RNA polymerase subunit alpha O... 538 2e-151
sp|Q09G14|RPOA_PLAOC DNA-directed RNA polymerase subunit alpha O... 538 2e-151
sp|Q14FC5|RPOA_POPAL DNA-directed RNA polymerase subunit alpha O... 535 9e-151
sp|A7Y3I1|RPOA_IPOPU DNA-directed RNA polymerase subunit alpha O... 533 5e-150
>sp|A4QKD7|RPOA_BARVE DNA-directed RNA polymerase subunit alpha OS=Barbarea
verna GN=rpoA PE=3 SV=1
Length = 327
Score = 650 bits (1675), Expect = 3e-185
Identities = 320/327 (97%), Positives = 325/327 (99%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTEPIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLPLFPFHNRLVNLRKKKKE GFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPLFPFHNRLVNLRKKKKEQGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFHIEDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKK 327
>sp|A4QLW5|RPOA_NASOF DNA-directed RNA polymerase subunit alpha OS=Nasturtium
officinale GN=rpoA PE=3 SV=1
Length = 327
Score = 650 bits (1675), Expect = 3e-185
Identities = 320/327 (97%), Positives = 325/327 (99%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTEPIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLPLFPFHNRLVNLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPLFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFHIEDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKK 327
>sp|A4QLD8|RPOA_LEPVR DNA-directed RNA polymerase subunit alpha OS=Lepidium
virginicum GN=rpoA PE=3 SV=1
Length = 327
Score = 646 bits (1665), Expect = 5e-184
Identities = 318/327 (97%), Positives = 324/327 (99%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITA+D
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATL EPI+LCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLMEPIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLPLFPFHNRLVNLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPLFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFHIEDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKK 327
>sp|A4QLM6|RPOA_LOBMA DNA-directed RNA polymerase subunit alpha OS=Lobularia
maritima GN=rpoA PE=3 SV=1
Length = 327
Score = 643 bits (1657), Expect = 4e-183
Identities = 316/327 (96%), Positives = 324/327 (99%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESR+DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRKDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITA+D
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLPLFPFHNRLVNLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPLFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFH+EDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHMEDVKKILDILEKK 327
>sp|A4QKM4|RPOA_CAPBU DNA-directed RNA polymerase subunit alpha OS=Capsella
bursa-pastoris GN=rpoA PE=3 SV=1
Length = 327
Score = 642 bits (1656), Expect = 5e-183
Identities = 316/327 (96%), Positives = 322/327 (98%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLP FPFHNRLVNLRKK KEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPFFPFHNRLVNLRKKTKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFH+EDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHVEDVKKILDILEKK 327
>sp|A4QJW3|RPOA_OLIPU DNA-directed RNA polymerase subunit alpha
OS=Olimarabidopsis pumila GN=rpoA PE=3 SV=1
Length = 327
Score = 642 bits (1656), Expect = 5e-183
Identities = 317/327 (96%), Positives = 322/327 (98%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEET YLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETVYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLP FPFHNRLVNLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPFFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFHIEDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKK 327
>sp|Q9XQN8|RPOA_SINAL DNA-directed RNA polymerase subunit alpha OS=Sinapis alba
GN=rpoA PE=1 SV=1
Length = 327
Score = 641 bits (1653), Expect = 1e-182
Identities = 315/327 (96%), Positives = 322/327 (98%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAM RALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMARALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRN ICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNPFICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILF+EIWTNGSLTPKEAL+EASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALYEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLP+FPFHN+LVNLR+KKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPVFPFHNKLVNLRQKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIKMEHFHIEDVKK+LDILEKK
Sbjct: 301 NSQEDLIKMEHFHIEDVKKLLDILEKK 327
>sp|A4QL51|RPOA_DRANE DNA-directed RNA polymerase subunit alpha OS=Draba
nemorosa GN=rpoA PE=3 SV=1
Length = 327
Score = 640 bits (1650), Expect = 3e-182
Identities = 316/327 (96%), Positives = 323/327 (98%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQW+CVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWRCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEIVDNTQHIAT+TE I+LCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIVDNTQHIATVTESIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGN KQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETF+LE
Sbjct: 181 NANHSIHSYGNGNGKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFHLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLPLFPFHNRLVNLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPLFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFHIEDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKK 327
>sp|A4QKW3|RPOA_CRUWA DNA-directed RNA polymerase subunit alpha OS=Crucihimalaya
wallichii GN=rpoA PE=3 SV=1
Length = 327
Score = 638 bits (1645), Expect = 1e-181
Identities = 313/327 (95%), Positives = 320/327 (97%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGE+EGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEMEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITR K ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYGTRNALICVQGPGYITARD
Sbjct: 61 CITRVKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEIVDNTQHIATLTEPI+LCIGLKIERNRGYSLK+SNN EDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIVDNTQHIATLTEPIDLCIGLKIERNRGYSLKISNNLEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQHQVTLP FPFHNR NLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHQVTLPFFPFHNRFFNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK 1390
NSQEDLIK+EHFH+EDVKKILDILEKK
Sbjct: 301 NSQEDLIKIEHFHVEDVKKILDILEKK 327
>sp|A4QK50|RPOA_ARAHI DNA-directed RNA polymerase subunit alpha OS=Arabis
hirsuta GN=rpoA PE=3 SV=1
Length = 337
Score = 633 bits (1631), Expect = 4e-180
Identities = 312/330 (94%), Positives = 321/330 (97%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQW+CVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWRCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNLNEIVL+SNLYG RNA+ICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLRSNLYGARNAIICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTE I+LCIGLKIERNRGYSLK+ N FEDRSYPIDAVFMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTESIDLCIGLKIERNRGYSLKILNTFEDRSYPIDAVFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGN KQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGNGNGKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQH VTLPLFPFHNRLVNLRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHHVTLPLFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK*KK 1381
NSQEDLIK+EHFHIEDVKKILDILEKK +K
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKKIEK 330
>sp|A4QJE7|RPOA_AETCO DNA-directed RNA polymerase subunit alpha OS=Aethionema
cordifolium GN=rpoA PE=3 SV=1
Length = 333
Score = 619 bits (1595), Expect = 7e-176
Identities = 306/329 (93%), Positives = 318/329 (96%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGE+EGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEMEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNL EIVL+SNLYGT NALICVQGPG ITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLQEIVLRSNLYGTCNALICVQGPGSITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCIGL+IERNRGYSLKM N+FED SYPIDA+FMPVQ
Sbjct: 121 IILPPSVEIIDNTQHIATLTEPIDLCIGLQIERNRGYSLKMPNHFEDGSYPIDALFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYG GNEKQEILFLEIWTNG+LTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGTGNEKQEILFLEIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQH+VTLPLFPFHNRLV LRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNQHKVTLPLFPFHNRLVKLRKKKKELVFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK*K 1384
NSQEDLIK+EHFHIEDVKKIL+ILEK K
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILEILEKNRK 329
>sp|A4QJN1|RPOA_AETGR DNA-directed RNA polymerase subunit alpha OS=Aethionema
grandiflora GN=rpoA PE=3 SV=1
Length = 333
Score = 616 bits (1586), Expect = 7e-175
Identities = 305/329 (92%), Positives = 316/329 (96%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGE+EGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEMEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK ENIPHDYSNIVGIQESVHEILMNL EIVL+SNLYGT NALICVQGPGYITARD
Sbjct: 61 CITRAKSENIPHDYSNIVGIQESVHEILMNLQEIVLRSNLYGTCNALICVQGPGYITARD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIATLTEPI+LCIGL+IERNRGYSLKM N FED SYPIDA+FMPVQ
Sbjct: 121 IILPPSVEIMDNTQHIATLTEPIDLCIGLQIERNRGYSLKMPNPFEDGSYPIDALFMPVQ 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYG GNE QEILFLEIWTNG+LTPKEALHEASRNLINLFIPFLHVEEETFYLE
Sbjct: 181 NANHSIHSYGTGNENQEILFLEIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NN+ +VTLPLFPFHNRLV LRKKKKEL FQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
Sbjct: 241 NNEDKVTLPLFPFHNRLVKLRKKKKELVFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK*K 1384
NSQEDLIK+EHFHIEDVKKILDILEK K
Sbjct: 301 NSQEDLIKIEHFHIEDVKKILDILEKNRK 329
>sp|Q2L938|RPOA_GOSHI DNA-directed RNA polymerase subunit alpha OS=Gossypium
hirsutum GN=rpoA PE=3 SV=1
Length = 329
Score = 564 bits (1451), Expect = 3e-159
Identities = 276/329 (83%), Positives = 298/329 (90%), Gaps = 2/329 (0%)
Frame = -3
Query: 2370 MVREKVKV--STRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIE 2197
MVREKVKV STRT QWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGE+E
Sbjct: 1 MVREKVKVSTSTRTRQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGELE 60
Query: 2196 GTCITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITA 2017
GTCITRAK E IPH+YS IVGIQESVHEILMNL EIVL+ NLYGTRNA IC +GPGY+TA
Sbjct: 61 GTCITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRGNLYGTRNAFICAKGPGYVTA 120
Query: 2016 RDIVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMP 1837
+DI+LPPSVEIVDNTQH+A+LTEPI+LCIGL+IERNRGY +K NF D SYPIDAVFMP
Sbjct: 121 QDIILPPSVEIVDNTQHVASLTEPIDLCIGLQIERNRGYGIKTPKNFHDGSYPIDAVFMP 180
Query: 1836 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 1657
V+NANHSIH YGN NEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH EEE +
Sbjct: 181 VRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLH 240
Query: 1656 LENNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDL 1477
LENNQH VTLP FPFH+RLV L KKKKE+ +YIFIDQ ELPPRIYNCLKKSNIHTLLDL
Sbjct: 241 LENNQHDVTLPFFPFHDRLVKLTKKKKEIALKYIFIDQSELPPRIYNCLKKSNIHTLLDL 300
Query: 1476 LNNSQEDLIKMEHFHIEDVKKILDILEKK 1390
LNNS+EDL+K+EHF IEDVK+IL ILEKK
Sbjct: 301 LNNSREDLMKIEHFRIEDVKQILGILEKK 329
>sp|Q49KW6|RPOA_EUCGG DNA-directed RNA polymerase subunit alpha OS=Eucalyptus
globulus subsp. globulus GN=rpoA PE=3 SV=1
Length = 337
Score = 553 bits (1423), Expect = 6e-156
Identities = 271/325 (83%), Positives = 294/325 (90%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKV+VSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAKFE IPH+YS IVGIQESVHEILMNL EIVL+SNLYGTRNA ICV+GPG +TA+D
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGCVTAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LP SVEIVDNTQ+IA LTEPINLCIGL+IERNRGY +K NF+D SYPIDAVFMPV+
Sbjct: 121 IILPTSVEIVDNTQYIANLTEPINLCIGLQIERNRGYHIKTPKNFQDGSYPIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH EEE +LE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NNQ++VTLP F FH+RL LRK KKE+ + IFIDQ ELPPR YNCLK+ NIHTL DLLN
Sbjct: 241 NNQYKVTLPFFTFHDRLAKLRKTKKEIALKSIFIDQFELPPRTYNCLKRYNIHTLFDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILE 1396
SQEDL+KME+F IEDVK+ILD LE
Sbjct: 301 KSQEDLMKMEYFRIEDVKQILDSLE 325
>sp|Q0ZIY7|RPOA_VITVI DNA-directed RNA polymerase subunit alpha OS=Vitis
vinifera GN=rpoA PE=3 SV=1
Length = 331
Score = 546 bits (1405), Expect = 7e-154
Identities = 268/326 (82%), Positives = 294/326 (90%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKV VSTRTLQWKCVESR D+KRL YGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRVDNKRLCYGRFILSPLIKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK E IPH+YS IVGIQESVHEILMNL EIVL+SNLYGTR A IC +GPGY+TA+D
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+ PPSVEIVDNTQHIA L EPI+LCIGL+IERNRGYS+K NNF+D SYPIDAVFMPV+
Sbjct: 121 IISPPSVEIVDNTQHIARLMEPIDLCIGLQIERNRGYSIKRPNNFQDGSYPIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNE+QEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH EEET +LE
Sbjct: 181 NANHSIHSYGNGNERQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NQH+ TLP FH+RL LRK KKE+ +YIFIDQLELPPRIYNCLK+SNIHTLLDLLN
Sbjct: 241 YNQHKSTLPPLTFHDRLAKLRKNKKEIELKYIFIDQLELPPRIYNCLKRSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEK 1393
SQ+DL+K+E F IEDVK++L ILEK
Sbjct: 301 KSQKDLMKIEDFRIEDVKQLLGILEK 326
>sp|A6MM68|RPOA_BUXMI DNA-directed RNA polymerase subunit alpha OS=Buxus
microphylla GN=rpoA PE=3 SV=1
Length = 337
Score = 538 bits (1384), Expect = 2e-151
Identities = 262/326 (80%), Positives = 294/326 (90%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVRE+V+V TRTLQWKCVESR D+KRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEVRVCTRTLQWKCVESRADNKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CIT AK E IPH+YSNIVGI+ESVHEILMNL EIVL+SNLYGTR+A ICV+GP ++TA+D
Sbjct: 61 CITCAKSEKIPHEYSNIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPRHVTAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+ PPSVEI+D TQHIA+LTEPI+LCIGL+IERNRGY++K N +D YPIDAVFMPV+
Sbjct: 121 IISPPSVEIIDTTQHIASLTEPIDLCIGLQIERNRGYNMKTPKNSQDGRYPIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH EE F L+
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHANEENFILK 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
+NQ++V LPLF FH+RL RK KKE+ FQ IFIDQ ELPPR YNCLK+SNIHTLLDLLN
Sbjct: 241 DNQNKVALPLFTFHDRLAKQRKNKKEISFQCIFIDQSELPPRTYNCLKRSNIHTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEK 1393
NSQEDL+K+EHF IEDVK+IL IL+K
Sbjct: 301 NSQEDLMKIEHFRIEDVKQILGILQK 326
>sp|Q9MTJ3|RPOA_OENEH DNA-directed RNA polymerase subunit alpha OS=Oenothera
elata subsp. hookeri GN=rpoA PE=3 SV=2
Length = 366
Score = 538 bits (1384), Expect = 2e-151
Identities = 265/325 (81%), Positives = 290/325 (89%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKV+VSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAKFE IPH+YS IVGIQESVHEILMNL EIVL+SNLYGT NA ICV+GPG +TA+D
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIA+L EPI+LCIGL+IERNRGY +K NNF+D SYPIDAVFMPV+
Sbjct: 121 ILLPPSVEIIDNTQHIASLMEPIHLCIGLQIERNRGYHIKSPNNFQDGSYPIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLI+LF+PFLH EEE +L
Sbjct: 181 NANHSIHSYGNQNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLHLG 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
N++ VT PLF FH +L LRK K E+ + IFIDQLELPPRIYN LK S IHTL DLLN
Sbjct: 241 KNKYNVTFPLFTFHKKLAKLRKPKNEIALKSIFIDQLELPPRIYNSLKGSKIHTLSDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILE 1396
SQEDL+KM+HF IEDVK+ILDILE
Sbjct: 301 KSQEDLMKMKHFRIEDVKQILDILE 325
>sp|Q09G14|RPOA_PLAOC DNA-directed RNA polymerase subunit alpha OS=Platanus
occidentalis GN=rpoA PE=3 SV=1
Length = 337
Score = 538 bits (1384), Expect = 2e-151
Identities = 262/326 (80%), Positives = 290/326 (88%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKV VSTRTLQWKCVESR DSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLIKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK E IPH+YS IVGI+ESVHEILMNL EIVL+SNLYGTRNA IC++GPGY+TA+D
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRNASICIRGPGYVTAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+ PPSVE VDNTQHIA LTEPI+ CI L+IERNRGY +K NN +D SYPIDAVFMPV+
Sbjct: 121 IISPPSVETVDNTQHIANLTEPIDFCIELEIERNRGYRMKTPNNSQDGSYPIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH +EE LE
Sbjct: 181 NANHSIHSYANGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAQEENILLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
+NQ+ VTLP F FH+RL +RK +KE+ +YIFIDQ ELPPR YNCLK+SNIHTLLDL N
Sbjct: 241 DNQNGVTLPFFTFHDRLAKIRKNEKEIALKYIFIDQSELPPRTYNCLKRSNIHTLLDLFN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEK 1393
NSQEDL+K+E F IEDVK+IL IL+K
Sbjct: 301 NSQEDLMKIEDFRIEDVKQILGILQK 326
>sp|Q14FC5|RPOA_POPAL DNA-directed RNA polymerase subunit alpha OS=Populus alba
GN=rpoA PE=3 SV=1
Length = 339
Score = 535 bits (1378), Expect = 9e-151
Identities = 262/331 (79%), Positives = 295/331 (89%), Gaps = 2/331 (0%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
MVREKV++STRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVRISTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITRAK + IPH++S I GIQES+HEILMNL EIVL+SNLYGT NA ICV+GPG +TA+D
Sbjct: 61 CITRAKSKKIPHEFSTITGIQESIHEILMNLKEIVLRSNLYGTHNASICVKGPGCVTAQD 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEI+DNTQHIA+L EPI+L IGL+IERNRGY +K NF+D SY IDAVFMPV+
Sbjct: 121 IILPPSVEIIDNTQHIASLREPIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHS+HSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH EEE+F+LE
Sbjct: 181 NANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEESFHLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
NQH++TLPLF FH+RL LRK +KE+ + IFIDQLEL P+IYNCLK+SNIHTL DLL
Sbjct: 241 KNQHKITLPLFAFHDRLAKLRKNQKEIALKSIFIDQLELAPKIYNCLKRSNIHTLWDLLK 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEKK*KKH 1378
NSQEDL+K+EHF IEDVK I IL K +KH
Sbjct: 301 NSQEDLMKIEHFRIEDVKHIFGIL--KIEKH 329
>sp|A7Y3I1|RPOA_IPOPU DNA-directed RNA polymerase subunit alpha OS=Ipomoea
purpurea GN=rpoA PE=3 SV=1
Length = 337
Score = 533 bits (1372), Expect = 5e-150
Identities = 262/326 (80%), Positives = 288/326 (88%)
Frame = -3
Query: 2370 MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 2191
M+REKV VSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MIREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 2190 CITRAKFENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD 2011
CITR K E PH+YS I GIQESVHEILMNL EIVL+SNLYGT +A ICV+GPG +TA D
Sbjct: 61 CITRVKSEKAPHEYSTIAGIQESVHEILMNLKEIVLRSNLYGTCDASICVKGPGCVTAED 120
Query: 2010 IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ 1831
I+LPPSVEIVDNTQHIA LTEPI+ CIGL+IERNRGY LK +NFED SYPIDAVFMPV+
Sbjct: 121 IILPPSVEIVDNTQHIAWLTEPIDFCIGLQIERNRGYILKTHHNFEDGSYPIDAVFMPVR 180
Query: 1830 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 1651
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFLH+EEE +LE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLE 240
Query: 1650 NNQHQVTLPLFPFHNRLVNLRKKKKELGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN 1471
+ +H + L FH+++ LRK KK+L + IFIDQLE PP+IYNCLKKSNI TLLDLLN
Sbjct: 241 DGEHTIPLSPLSFHDKVAKLRKNKKKLALKSIFIDQLEFPPKIYNCLKKSNISTLLDLLN 300
Query: 1470 NSQEDLIKMEHFHIEDVKKILDILEK 1393
SQEDL+K+EHFHIEDVK+IL ILEK
Sbjct: 301 KSQEDLMKIEHFHIEDVKQILGILEK 326
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,819,846,109
Number of Sequences: 518415
Number of Extensions: 95819846109
Number of Successful Extensions: 619733697
Number of sequences better than 0.0: 0
|
