BLASTX 7.6.2
Query= UN23034 /QuerySize=547
(546 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53740.2 | Symbols: | 60S ribosomal protein L... 193 6e-050
TAIR9_protein||AT3G53740.3 | Symbols: | 60S ribosomal protein L... 193 6e-050
TAIR9_protein||AT3G53740.4 | Symbols: | 60S ribosomal protein L... 193 6e-050
TAIR9_protein||AT2G37600.1 | Symbols: | 60S ribosomal protein L... 191 2e-049
TAIR9_protein||AT2G37600.2 | Symbols: | 60S ribosomal protein L... 191 2e-049
TAIR9_protein||AT5G02450.1 | Symbols: | 60S ribosomal protein L... 178 2e-045
TAIR9_protein||AT3G53740.1 | Symbols: | 60S ribosomal protein L... 127 6e-030
>TAIR9_protein||AT3G53740.2 | Symbols: | 60S ribosomal protein L36 (RPL36B) |
chr3:19913921-19914813 REVERSE
Length = 113
Score = 193 bits (490), Expect = 6e-050
Identities = 98/104 (94%), Positives = 101/104 (97%)
Frame = +3
Query: 24 MATPQVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRI 203
M TPQVKTGLFVGLNKGHVVTRRELAPRP SRKGKTSKRT+FIR+LI+EVAG APYEKRI
Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60
Query: 204 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 104
>TAIR9_protein||AT3G53740.3 | Symbols: | 60S ribosomal protein L36 (RPL36B) |
chr3:19913921-19914813 REVERSE
Length = 113
Score = 193 bits (490), Expect = 6e-050
Identities = 98/104 (94%), Positives = 101/104 (97%)
Frame = +3
Query: 24 MATPQVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRI 203
M TPQVKTGLFVGLNKGHVVTRRELAPRP SRKGKTSKRT+FIR+LI+EVAG APYEKRI
Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60
Query: 204 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 104
>TAIR9_protein||AT3G53740.4 | Symbols: | 60S ribosomal protein L36 (RPL36B) |
chr3:19913921-19914813 REVERSE
Length = 113
Score = 193 bits (490), Expect = 6e-050
Identities = 98/104 (94%), Positives = 101/104 (97%)
Frame = +3
Query: 24 MATPQVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRI 203
M TPQVKTGLFVGLNKGHVVTRRELAPRP SRKGKTSKRT+FIR+LI+EVAG APYEKRI
Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60
Query: 204 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 104
>TAIR9_protein||AT2G37600.1 | Symbols: | 60S ribosomal protein L36 (RPL36A) |
chr2:15774410-15775203 REVERSE
Length = 114
Score = 191 bits (485), Expect = 2e-049
Identities = 98/104 (94%), Positives = 99/104 (95%)
Frame = +3
Query: 24 MATPQVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRI 203
M TP VKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRT+FIR LIREVAG APYEKRI
Sbjct: 1 MTTPAVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRI 60
Query: 204 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRS G
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLG 104
>TAIR9_protein||AT2G37600.2 | Symbols: | 60S ribosomal protein L36 (RPL36A) |
chr2:15774410-15775203 REVERSE
Length = 114
Score = 191 bits (485), Expect = 2e-049
Identities = 98/104 (94%), Positives = 99/104 (95%)
Frame = +3
Query: 24 MATPQVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRI 203
M TP VKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRT+FIR LIREVAG APYEKRI
Sbjct: 1 MTTPAVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRI 60
Query: 204 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRS G
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLG 104
>TAIR9_protein||AT5G02450.1 | Symbols: | 60S ribosomal protein L36 (RPL36C) |
chr5:533501-534394 FORWARD
Length = 109
Score = 178 bits (451), Expect = 2e-045
Identities = 90/99 (90%), Positives = 95/99 (95%)
Frame = +3
Query: 39 VKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRITELLK 218
V TGLFVGLNKGHVVT+RE PRPN+RKGKTSKRT+FIR+LI+EVAG APYEKRITELLK
Sbjct: 2 VATGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLK 61
Query: 219 VGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
VGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG
Sbjct: 62 VGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 100
>TAIR9_protein||AT3G53740.1 | Symbols: | 60S ribosomal protein L36 (RPL36B) |
chr3:19913921-19914813 REVERSE
Length = 104
Score = 127 bits (317), Expect = 6e-030
Identities = 67/80 (83%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 MATPQVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTLFIRSLIREVAGFAPYEKRI 203
M TPQVKTGLFVGLNKGHVVTRRELAPRP SRKGKTSKRT+FIR+LI+EVAG APYEKRI
Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60
Query: 204 TELLKVGKDKRAL-KVAKRK 260
TELLKV K K K AKRK
Sbjct: 61 TELLKVAKRKLGTHKRAKRK 80
Score = 65 bits (156), Expect = 3e-011
Identities = 32/32 (100%)
Frame = +3
Query: 240 LKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 335
LKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG
Sbjct: 64 LKVAKRKLGTHKRAKRKREEMSSVLRKMRSGG 95
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,916,432,750
Number of Sequences: 33410
Number of Extensions: 11916432750
Number of Successful Extensions: 381292804
Number of sequences better than 0.0: 0
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